BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum22_contig00035864
         (1474 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_021973859.1| DNA-directed RNA polymerases IV and V subuni...   822   0.0  
gb|PLY89966.1| hypothetical protein LSAT_2X114740 [Lactuca sativa]    793   0.0  
ref|XP_023757782.1| DNA-directed RNA polymerases IV and V subuni...   793   0.0  
gb|AAY68198.1| RNA polymerase IV second largest subunit, partial...   721   0.0  
gb|AAY68200.1| RNA polymerase IV second largest subunit, partial...   712   0.0  
ref|XP_019252729.1| PREDICTED: DNA-directed RNA polymerases IV a...   725   0.0  
ref|XP_011082677.1| DNA-directed RNA polymerases IV and V subuni...   723   0.0  
ref|XP_016481856.1| PREDICTED: DNA-directed RNA polymerases IV a...   723   0.0  
gb|PIN04091.1| RNA polymerase II, second largest subunit [Handro...   723   0.0  
ref|XP_009605686.1| PREDICTED: DNA-directed RNA polymerases IV a...   721   0.0  
ref|XP_018839587.1| PREDICTED: DNA-directed RNA polymerase D sub...   720   0.0  
ref|XP_002283296.1| PREDICTED: DNA-directed RNA polymerases IV a...   720   0.0  
gb|PHU23638.1| DNA-directed RNA polymerases IV and V subunit 2 [...   718   0.0  
gb|PHT87914.1| DNA-directed RNA polymerases IV and V subunit 2 [...   718   0.0  
gb|PHT53681.1| hypothetical protein CQW23_08143 [Capsicum baccatum]   718   0.0  
ref|XP_016563842.1| PREDICTED: DNA-directed RNA polymerases IV a...   718   0.0  
gb|OMO69360.1| hypothetical protein COLO4_29107 [Corchorus olito...   712   0.0  
emb|CDP09677.1| unnamed protein product [Coffea canephora]            716   0.0  
gb|OTF95570.1| putative RNA polymerase, beta subunit, protrusion...   715   0.0  
gb|EOY29337.1| DNA-directed RNA polymerase isoform 2 [Theobroma ...   707   0.0  

>ref|XP_021973859.1| DNA-directed RNA polymerases IV and V subunit 2-like [Helianthus
            annuus]
 ref|XP_021973867.1| DNA-directed RNA polymerases IV and V subunit 2-like [Helianthus
            annuus]
 gb|OTG36794.1| putative DNA-directed RNA polymerase II subunit RPB2 [Helianthus
            annuus]
          Length = 1155

 Score =  822 bits (2123), Expect = 0.0
 Identities = 401/492 (81%), Positives = 440/492 (89%), Gaps = 2/492 (0%)
 Frame = +3

Query: 3    WVGVCDDATSLVANIRSKRRSKEVHYQVEIVQDDKNREVRIFTDAGRLMRPLLVVENIKN 182
            WVG+C +A SLVA+ RSKRR KEVH+QVEI  DDKN EVRIF+DAGR+MRPLL+VE +KN
Sbjct: 557  WVGICANAASLVADFRSKRRKKEVHHQVEIKLDDKNGEVRIFSDAGRIMRPLLLVEGLKN 616

Query: 183  IKFLKERDYSFQSLLDHXXXXXXXXXXXXNCYTAWGVKYLFHDEPLEKTSPPYTHCELDG 362
            IK L+  DYSFQSL+D+            +CYTAWG+K+LFH+   E  +P YTHCELD 
Sbjct: 617  IKLLESGDYSFQSLIDNGIVELIGSEEEEDCYTAWGIKHLFHNT--ETNAPKYTHCELDM 674

Query: 363  SFLLSLSCGIIPFANHDHAKRVLFQAQKHSQQAIGHSTTNPNIRVDTIAHNLFYPQKPLF 542
            SFLLS SCGIIPFANHDHAKRVLFQ+QKHSQQAIG+STTNPNIRVDT+AHNLFYPQKPLF
Sbjct: 675  SFLLSFSCGIIPFANHDHAKRVLFQSQKHSQQAIGYSTTNPNIRVDTLAHNLFYPQKPLF 734

Query: 543  RTVLSDCLGAPKYGNGQRLQPRDEYYNGQCAIVAVNVHLGYNQEDSLVMNRASLERGMFR 722
            +TVLSDCLG PKY NGQ LQ RDEYYNGQCAIVAVNVHLGYNQEDSLVMNRASLERGMFR
Sbjct: 735  KTVLSDCLGTPKYSNGQGLQSRDEYYNGQCAIVAVNVHLGYNQEDSLVMNRASLERGMFR 794

Query: 723  SEHVRSYKADIFXXXXXXXXXXXX--IIFGKIESKIGRVDNLDDDGFPYVGARLKSGDII 896
            SEHVRSYKA+I+              I+FGK++SKIGRVD L++DGFPYVGARL+SGDI+
Sbjct: 795  SEHVRSYKAEIYNTESFGKKAKFEDNIVFGKVQSKIGRVDKLEEDGFPYVGARLESGDIV 854

Query: 897  IGKYAEAGGDHSIKLKHGERGSVQKVVLSANDDGKNFATVSLRQVRSPSLGDKFSSMHGQ 1076
            IGK+AE+GGDHSIKLKHGE+GSVQKVV+SANDDGKNFATVSLRQVRSPSLGDKFSSMHGQ
Sbjct: 855  IGKHAESGGDHSIKLKHGEKGSVQKVVISANDDGKNFATVSLRQVRSPSLGDKFSSMHGQ 914

Query: 1077 KGVLGFLESQENFPFTIQGIVPDIVINPHAFPSRQTPGQLLEAALGKGIALGGSLKYATP 1256
            KGVLG+LESQENFPFTIQGIVPD+VINPHAFPSRQTPGQLLEAALGKGIALGGS++YATP
Sbjct: 915  KGVLGYLESQENFPFTIQGIVPDVVINPHAFPSRQTPGQLLEAALGKGIALGGSMRYATP 974

Query: 1257 FSTPSVEAITDQLHRCGFSRWGNERVYDGRTGEKVESLVFMGPTFYQKLVHMSEDKVKFR 1436
            FSTPSVE IT+QLHRCGFSRWGNERVY+GRTGE VESLVFMGPTFYQKLVHMSEDKVKFR
Sbjct: 975  FSTPSVEDITNQLHRCGFSRWGNERVYNGRTGEMVESLVFMGPTFYQKLVHMSEDKVKFR 1034

Query: 1437 NIGPVHPLTRQP 1472
            NIGPVHPLTRQP
Sbjct: 1035 NIGPVHPLTRQP 1046


>gb|PLY89966.1| hypothetical protein LSAT_2X114740 [Lactuca sativa]
          Length = 655

 Score =  793 bits (2049), Expect = 0.0
 Identities = 397/494 (80%), Positives = 432/494 (87%), Gaps = 4/494 (0%)
 Frame = +3

Query: 3    WVGVCDDATSLVANIRSKRRSKEVHYQVEIVQDDKNREVRIFTDAGRLMRPLLVVENIKN 182
            WVG+CDD+ SLV + RSKRR KEV YQVEI +D+KN+EVRIF+DAGRLMRPLL VEN+KN
Sbjct: 61   WVGICDDSASLVDDFRSKRRRKEVPYQVEIKRDEKNKEVRIFSDAGRLMRPLLCVENLKN 120

Query: 183  IKFLKERDYSFQSLLDHXXXXXXXXXXXXNCYTAWGVKYLFHDEPLEKTSPPYTHCELDG 362
            IK LK  DYSFQSL+++            +CYTAWGVK+LF     +KTSP YTHCELD 
Sbjct: 121  IKSLKTGDYSFQSLVNNGIIELIGTEEEEDCYTAWGVKHLF-----QKTSPLYTHCELDM 175

Query: 363  SFLLSLSCGIIPFANHDHAKRVLFQAQKHSQQAIGHSTTNPNIRVDTIAHNLFYPQKPLF 542
            SFLLSLSCGIIPFANHDHAKRVLFQ+QKHSQQAIG+STTNPNIRVDT++H LFYPQKPLF
Sbjct: 176  SFLLSLSCGIIPFANHDHAKRVLFQSQKHSQQAIGYSTTNPNIRVDTLSHQLFYPQKPLF 235

Query: 543  RTVLSDCLGAPKYGNGQRLQPRDEYYNGQCAIVAVNVHLGYNQEDSLVMNRASLERGMFR 722
            RTVLSD L   K+GN       +EYYNGQCAIVAVN+HLGYNQEDSLVMNRASLERGMFR
Sbjct: 236  RTVLSDSLATQKHGNNIN---GNEYYNGQCAIVAVNIHLGYNQEDSLVMNRASLERGMFR 292

Query: 723  SEHVRSYKADIFXXXXXXXXXXXX----IIFGKIESKIGRVDNLDDDGFPYVGARLKSGD 890
            SEHVRSYKAD+                 IIFGKI+SKIGRV+NLD+DGFP+VGARL SGD
Sbjct: 293  SEHVRSYKADVSNKESCGSGKKGRFDDDIIFGKIQSKIGRVENLDEDGFPFVGARLNSGD 352

Query: 891  IIIGKYAEAGGDHSIKLKHGERGSVQKVVLSANDDGKNFATVSLRQVRSPSLGDKFSSMH 1070
            I+IGKYAE+GGDHSIKLKHGERGSVQKVVLSANDDGKNFATVSLRQVR+PSLGDKFSSMH
Sbjct: 353  IVIGKYAESGGDHSIKLKHGERGSVQKVVLSANDDGKNFATVSLRQVRTPSLGDKFSSMH 412

Query: 1071 GQKGVLGFLESQENFPFTIQGIVPDIVINPHAFPSRQTPGQLLEAALGKGIALGGSLKYA 1250
            GQKGVLGFLESQENFPFTI+GIVPDIVINPHAFPSRQTPGQLLEAALGKGIA+GG LKYA
Sbjct: 413  GQKGVLGFLESQENFPFTIEGIVPDIVINPHAFPSRQTPGQLLEAALGKGIAMGGPLKYA 472

Query: 1251 TPFSTPSVEAITDQLHRCGFSRWGNERVYDGRTGEKVESLVFMGPTFYQKLVHMSEDKVK 1430
            TPFST SV+AIT+QLHRCGFSRWGNERVY+GRTGE VESLVFMGPTFYQKLVHMSEDKVK
Sbjct: 473  TPFSTLSVDAITNQLHRCGFSRWGNERVYNGRTGEMVESLVFMGPTFYQKLVHMSEDKVK 532

Query: 1431 FRNIGPVHPLTRQP 1472
            FRN+GPVHPLTRQP
Sbjct: 533  FRNVGPVHPLTRQP 546


>ref|XP_023757782.1| DNA-directed RNA polymerases IV and V subunit 2-like [Lactuca sativa]
 ref|XP_023757783.1| DNA-directed RNA polymerases IV and V subunit 2-like [Lactuca sativa]
          Length = 1167

 Score =  793 bits (2049), Expect = 0.0
 Identities = 397/494 (80%), Positives = 432/494 (87%), Gaps = 4/494 (0%)
 Frame = +3

Query: 3    WVGVCDDATSLVANIRSKRRSKEVHYQVEIVQDDKNREVRIFTDAGRLMRPLLVVENIKN 182
            WVG+CDD+ SLV + RSKRR KEV YQVEI +D+KN+EVRIF+DAGRLMRPLL VEN+KN
Sbjct: 573  WVGICDDSASLVDDFRSKRRRKEVPYQVEIKRDEKNKEVRIFSDAGRLMRPLLCVENLKN 632

Query: 183  IKFLKERDYSFQSLLDHXXXXXXXXXXXXNCYTAWGVKYLFHDEPLEKTSPPYTHCELDG 362
            IK LK  DYSFQSL+++            +CYTAWGVK+LF     +KTSP YTHCELD 
Sbjct: 633  IKSLKTGDYSFQSLVNNGIIELIGTEEEEDCYTAWGVKHLF-----QKTSPLYTHCELDM 687

Query: 363  SFLLSLSCGIIPFANHDHAKRVLFQAQKHSQQAIGHSTTNPNIRVDTIAHNLFYPQKPLF 542
            SFLLSLSCGIIPFANHDHAKRVLFQ+QKHSQQAIG+STTNPNIRVDT++H LFYPQKPLF
Sbjct: 688  SFLLSLSCGIIPFANHDHAKRVLFQSQKHSQQAIGYSTTNPNIRVDTLSHQLFYPQKPLF 747

Query: 543  RTVLSDCLGAPKYGNGQRLQPRDEYYNGQCAIVAVNVHLGYNQEDSLVMNRASLERGMFR 722
            RTVLSD L   K+GN       +EYYNGQCAIVAVN+HLGYNQEDSLVMNRASLERGMFR
Sbjct: 748  RTVLSDSLATQKHGNNIN---GNEYYNGQCAIVAVNIHLGYNQEDSLVMNRASLERGMFR 804

Query: 723  SEHVRSYKADIFXXXXXXXXXXXX----IIFGKIESKIGRVDNLDDDGFPYVGARLKSGD 890
            SEHVRSYKAD+                 IIFGKI+SKIGRV+NLD+DGFP+VGARL SGD
Sbjct: 805  SEHVRSYKADVSNKESCGSGKKGRFDDDIIFGKIQSKIGRVENLDEDGFPFVGARLNSGD 864

Query: 891  IIIGKYAEAGGDHSIKLKHGERGSVQKVVLSANDDGKNFATVSLRQVRSPSLGDKFSSMH 1070
            I+IGKYAE+GGDHSIKLKHGERGSVQKVVLSANDDGKNFATVSLRQVR+PSLGDKFSSMH
Sbjct: 865  IVIGKYAESGGDHSIKLKHGERGSVQKVVLSANDDGKNFATVSLRQVRTPSLGDKFSSMH 924

Query: 1071 GQKGVLGFLESQENFPFTIQGIVPDIVINPHAFPSRQTPGQLLEAALGKGIALGGSLKYA 1250
            GQKGVLGFLESQENFPFTI+GIVPDIVINPHAFPSRQTPGQLLEAALGKGIA+GG LKYA
Sbjct: 925  GQKGVLGFLESQENFPFTIEGIVPDIVINPHAFPSRQTPGQLLEAALGKGIAMGGPLKYA 984

Query: 1251 TPFSTPSVEAITDQLHRCGFSRWGNERVYDGRTGEKVESLVFMGPTFYQKLVHMSEDKVK 1430
            TPFST SV+AIT+QLHRCGFSRWGNERVY+GRTGE VESLVFMGPTFYQKLVHMSEDKVK
Sbjct: 985  TPFSTLSVDAITNQLHRCGFSRWGNERVYNGRTGEMVESLVFMGPTFYQKLVHMSEDKVK 1044

Query: 1431 FRNIGPVHPLTRQP 1472
            FRN+GPVHPLTRQP
Sbjct: 1045 FRNVGPVHPLTRQP 1058


>gb|AAY68198.1| RNA polymerase IV second largest subunit, partial [Rhododendron
            macrophyllum]
          Length = 1019

 Score =  721 bits (1861), Expect = 0.0
 Identities = 356/493 (72%), Positives = 407/493 (82%), Gaps = 3/493 (0%)
 Frame = +3

Query: 3    WVGVCDDATSLVANIRSKRRSKEVHYQVEIVQDDKNREVRIFTDAGRLMRPLLVVENIKN 182
            WVGVC D+ S VA +R KRR KEV +QVEI +D+++REVR+F+DAGR++RPLLVVEN+  
Sbjct: 419  WVGVCGDSVSFVAALRRKRRRKEVPHQVEIKRDEQHREVRVFSDAGRILRPLLVVENLGK 478

Query: 183  IKFLKERDYSFQSLLDHXXXXXXXXXXXXNCYTAWGVKYLFHDEPLEKTSPPYTHCELDG 362
            IK  K  DYSFQSLLD             +C TAWG+ YLF +    K +  YTHCELD 
Sbjct: 479  IKASKGGDYSFQSLLDKGVIEFIGTEEEEDCRTAWGINYLFMENEA-KATVKYTHCELDM 537

Query: 363  SFLLSLSCGIIPFANHDHAKRVLFQAQKHSQQAIGHSTTNPNIRVDTIAHNLFYPQKPLF 542
            SFLL LS  IIPFANHDHA+RVL+Q++KHSQQA+G +TTNPNIRVDT  H L+YPQ+PLF
Sbjct: 538  SFLLGLSAAIIPFANHDHARRVLYQSEKHSQQAMGFNTTNPNIRVDTNTHQLYYPQRPLF 597

Query: 543  RTVLSDCLGAPKYGNGQR-LQPRDEYYNGQCAIVAVNVHLGYNQEDSLVMNRASLERGMF 719
            RT++SDCLG P Y  G   + PR EY+NGQCAIVAVNVHLGYNQEDSLVMNRASLERGMF
Sbjct: 598  RTMVSDCLGKPGYPLGHNGIVPRAEYFNGQCAIVAVNVHLGYNQEDSLVMNRASLERGMF 657

Query: 720  RSEHVRSYKADIFXXXXXXXXXXXX--IIFGKIESKIGRVDNLDDDGFPYVGARLKSGDI 893
            RSEH+RSYKAD+               + FGK++SKIGRVD+LDDDGFP++GA L++GDI
Sbjct: 658  RSEHIRSYKADVDNKESVGKKPKFEDSVNFGKVQSKIGRVDSLDDDGFPFIGANLQNGDI 717

Query: 894  IIGKYAEAGGDHSIKLKHGERGSVQKVVLSANDDGKNFATVSLRQVRSPSLGDKFSSMHG 1073
            ++G+ AE+G DHSIKLKH ERG VQKVVLSAND+GKNFA VSLRQVR+P LGDKFSSMHG
Sbjct: 718  VVGRCAESGADHSIKLKHTERGMVQKVVLSANDEGKNFAVVSLRQVRTPCLGDKFSSMHG 777

Query: 1074 QKGVLGFLESQENFPFTIQGIVPDIVINPHAFPSRQTPGQLLEAALGKGIALGGSLKYAT 1253
            QKGVLGFLESQENFPFTIQGIVPDIV+NPHAFPSRQTPGQLLEAALGKGIA GG  KYAT
Sbjct: 778  QKGVLGFLESQENFPFTIQGIVPDIVVNPHAFPSRQTPGQLLEAALGKGIACGGLQKYAT 837

Query: 1254 PFSTPSVEAITDQLHRCGFSRWGNERVYDGRTGEKVESLVFMGPTFYQKLVHMSEDKVKF 1433
            PFST SV+A+TDQLHR GFSRWG+ERVY+GRTGE + SLVFMGPTFYQ+L HMSEDKVKF
Sbjct: 838  PFSTLSVDAVTDQLHRAGFSRWGSERVYNGRTGEMIHSLVFMGPTFYQRLTHMSEDKVKF 897

Query: 1434 RNIGPVHPLTRQP 1472
            RN GPVHPLTRQP
Sbjct: 898  RNTGPVHPLTRQP 910


>gb|AAY68200.1| RNA polymerase IV second largest subunit, partial [Antirrhinum majus]
          Length = 821

 Score =  712 bits (1839), Expect = 0.0
 Identities = 353/493 (71%), Positives = 410/493 (83%), Gaps = 3/493 (0%)
 Frame = +3

Query: 3    WVGVCDDATSLVANIRSKRRSKEVHYQVEIVQDDKNREVRIFTDAGRLMRPLLVVENIKN 182
            WVG+C D+ S VA +R KRR  E+ YQVEI +D ++REVRIF DAGR++RPLL+V+ +K 
Sbjct: 222  WVGMCKDSKSFVAKLRRKRRMMEMPYQVEIKRDVRHREVRIFADAGRILRPLLLVQKLKK 281

Query: 183  IKFLKERDYSFQSLLDHXXXXXXXXXXXXNCYTAWGVKYLFHDEPLEKTSPPYTHCELDG 362
            IK LK  ++SFQSLLD+            +C TAWG+KYLF  +  EK    YTHCELD 
Sbjct: 282  IKELKG-EFSFQSLLDNGIVEFIGAEEEEDCRTAWGIKYLFSADK-EKPLVKYTHCELDC 339

Query: 363  SFLLSLSCGIIPFANHDHAKRVLFQAQKHSQQAIGHSTTNPNIRVDTIAHNLFYPQKPLF 542
            SFLL LSCG+IPFANHDHA+RVL+Q++KHSQQAIG STTNP+IRVDT +HNL+YPQ+P+F
Sbjct: 340  SFLLGLSCGLIPFANHDHARRVLYQSEKHSQQAIGFSTTNPSIRVDTNSHNLYYPQRPIF 399

Query: 543  RTVLSDCLGAPKYGNGQR-LQPRDEYYNGQCAIVAVNVHLGYNQEDSLVMNRASLERGMF 719
             T+LSD LG  KY +  + + P  E++NGQCAIVAVNVHLGYNQEDS+VMNRAS+ERGMF
Sbjct: 400  GTMLSDSLGKSKYSSHHKGMLPHPEFFNGQCAIVAVNVHLGYNQEDSIVMNRASMERGMF 459

Query: 720  RSEHVRSYKADI--FXXXXXXXXXXXXIIFGKIESKIGRVDNLDDDGFPYVGARLKSGDI 893
            R+EHVRSYKA++               + FGK ESKIGRVD+LDDDGFP++GA L++GDI
Sbjct: 460  RTEHVRSYKAEVDNSDAPGKKLKPDDLVDFGKTESKIGRVDSLDDDGFPFIGANLQTGDI 519

Query: 894  IIGKYAEAGGDHSIKLKHGERGSVQKVVLSANDDGKNFATVSLRQVRSPSLGDKFSSMHG 1073
            +IGK+A +G DHSIKLKH ERG VQKVVLS+NDDGKNF  VSLRQVRSP LGDKFSSMHG
Sbjct: 520  VIGKHAASGVDHSIKLKHTERGMVQKVVLSSNDDGKNFGVVSLRQVRSPCLGDKFSSMHG 579

Query: 1074 QKGVLGFLESQENFPFTIQGIVPDIVINPHAFPSRQTPGQLLEAALGKGIALGGSLKYAT 1253
            QKGVLGFLESQENFPFT +GIVPDIVINPHAFPSRQTPGQLLEAALGKGIALGG+LKYAT
Sbjct: 580  QKGVLGFLESQENFPFTKEGIVPDIVINPHAFPSRQTPGQLLEAALGKGIALGGALKYAT 639

Query: 1254 PFSTPSVEAITDQLHRCGFSRWGNERVYDGRTGEKVESLVFMGPTFYQKLVHMSEDKVKF 1433
            PFSTPSV+ IT QLHR GFSRWG+ERVYDGRTGEKVESL+FMGPTFYQ+L HM+EDK+KF
Sbjct: 640  PFSTPSVDDITAQLHRLGFSRWGDERVYDGRTGEKVESLIFMGPTFYQRLTHMAEDKIKF 699

Query: 1434 RNIGPVHPLTRQP 1472
            RN GPVHPLTRQP
Sbjct: 700  RNTGPVHPLTRQP 712


>ref|XP_019252729.1| PREDICTED: DNA-directed RNA polymerases IV and V subunit 2-like
            [Nicotiana attenuata]
 ref|XP_019252735.1| PREDICTED: DNA-directed RNA polymerases IV and V subunit 2-like
            [Nicotiana attenuata]
 ref|XP_019252739.1| PREDICTED: DNA-directed RNA polymerases IV and V subunit 2-like
            [Nicotiana attenuata]
 gb|OIT08688.1| dna-directed rna polymerases iv and v subunit 2 [Nicotiana attenuata]
          Length = 1218

 Score =  725 bits (1871), Expect = 0.0
 Identities = 359/495 (72%), Positives = 411/495 (83%), Gaps = 5/495 (1%)
 Frame = +3

Query: 3    WVGVCDDATSLVANIRSKRRSKEVHYQVEIVQDDKNREVRIFTDAGRLMRPLLVVENIKN 182
            WVG+C+D+   V+ +R KRR  E+ +QVE+ +D++  EVRIF+DAGR++RPLLVV N+K 
Sbjct: 619  WVGICEDSALFVSKLRRKRRRNELPHQVEVKRDEQQGEVRIFSDAGRILRPLLVVSNLKK 678

Query: 183  IKFLKERDYSFQSLLDHXXXXXXXXXXXXNCYTAWGVKYLFHDEPLEKTSPP--YTHCEL 356
            IK LK  DY FQSLLD+            +C TAWGV+YL      +K +PP  YTHCEL
Sbjct: 679  IKALKGGDYGFQSLLDNGIIELIGPEEEEDCRTAWGVEYLLK---ADKENPPAKYTHCEL 735

Query: 357  DGSFLLSLSCGIIPFANHDHAKRVLFQAQKHSQQAIGHSTTNPNIRVDTIAHNLFYPQKP 536
            D SFLL LSCGIIPFANHDHA+RVL+Q++KHSQQAIG ST NPNIRVDT  H L+YPQ+P
Sbjct: 736  DMSFLLGLSCGIIPFANHDHARRVLYQSEKHSQQAIGFSTVNPNIRVDTNTHQLYYPQRP 795

Query: 537  LFRTVLSDCLGAPKYGNGQR-LQPRDEYYNGQCAIVAVNVHLGYNQEDSLVMNRASLERG 713
            LFRT+LSD LG PKY + Q+ + PR EYYNGQCAIVAVNVHLGYNQEDSLVMNRASLERG
Sbjct: 796  LFRTMLSDSLGKPKYAHSQKGMLPRPEYYNGQCAIVAVNVHLGYNQEDSLVMNRASLERG 855

Query: 714  MFRSEHVRSYKADIFXXXXXXXXXXXX--IIFGKIESKIGRVDNLDDDGFPYVGARLKSG 887
            MFRSEHVRSYKA++               + FGK +SKIGRVD+LDDDGFP++GA L+SG
Sbjct: 856  MFRSEHVRSYKAEVDNKEAIGKKLKIEDSVNFGKTQSKIGRVDSLDDDGFPFIGANLQSG 915

Query: 888  DIIIGKYAEAGGDHSIKLKHGERGSVQKVVLSANDDGKNFATVSLRQVRSPSLGDKFSSM 1067
            DIIIGKYAE+G DHS+KLKH ERG VQKV+LSAND+GKNFA VSLRQVRSP LGDKFSSM
Sbjct: 916  DIIIGKYAESGADHSVKLKHTERGMVQKVLLSANDEGKNFAVVSLRQVRSPCLGDKFSSM 975

Query: 1068 HGQKGVLGFLESQENFPFTIQGIVPDIVINPHAFPSRQTPGQLLEAALGKGIALGGSLKY 1247
            HGQKGVLGFLESQENFPFT QGIVPDIVINPHAFPSRQTPGQLLEAALGKGIALGGS KY
Sbjct: 976  HGQKGVLGFLESQENFPFTAQGIVPDIVINPHAFPSRQTPGQLLEAALGKGIALGGSQKY 1035

Query: 1248 ATPFSTPSVEAITDQLHRCGFSRWGNERVYDGRTGEKVESLVFMGPTFYQKLVHMSEDKV 1427
            ATPFST SV+AI +QLH  GFS+WGNERVY+GRTGE V++L+FMGPTFYQ+L+HM+EDKV
Sbjct: 1036 ATPFSTLSVDAIIEQLHGRGFSKWGNERVYNGRTGEMVQNLIFMGPTFYQRLIHMAEDKV 1095

Query: 1428 KFRNIGPVHPLTRQP 1472
            KFRN GPVHPLTRQP
Sbjct: 1096 KFRNTGPVHPLTRQP 1110


>ref|XP_011082677.1| DNA-directed RNA polymerases IV and V subunit 2 [Sesamum indicum]
          Length = 1207

 Score =  723 bits (1866), Expect = 0.0
 Identities = 358/492 (72%), Positives = 410/492 (83%), Gaps = 2/492 (0%)
 Frame = +3

Query: 3    WVGVCDDATSLVANIRSKRRSKEVHYQVEIVQDDKNREVRIFTDAGRLMRPLLVVENIKN 182
            WVG+C D++S VA +R KRR  EV +Q+EI +D  + EVRIF DAGR++RPLL+V+N++ 
Sbjct: 609  WVGICKDSSSFVARVRRKRRKTEVPHQIEIKRDKHHGEVRIFADAGRILRPLLIVQNLRK 668

Query: 183  IKFLKERDYSFQSLLDHXXXXXXXXXXXXNCYTAWGVKYLFHDEPLEKTSPPYTHCELDG 362
            IK LK  D+SFQSLLD             +C TAWGV+YLF  E LE     YTHCELD 
Sbjct: 669  IKDLKG-DFSFQSLLDSSIIELIGPEEEEDCQTAWGVRYLFTAE-LENPPIKYTHCELDS 726

Query: 363  SFLLSLSCGIIPFANHDHAKRVLFQAQKHSQQAIGHSTTNPNIRVDTIAHNLFYPQKPLF 542
            SFLL LSCGIIPFANHDHA+RVL+Q++KHSQQAIG STTN +IRVDT +H L+YPQ+PLF
Sbjct: 727  SFLLGLSCGIIPFANHDHARRVLYQSEKHSQQAIGFSTTNSSIRVDTNSHQLYYPQRPLF 786

Query: 543  RTVLSDCLGAPKYGNGQRLQPRDEYYNGQCAIVAVNVHLGYNQEDSLVMNRASLERGMFR 722
            RT+LSDCLG  KY + + + PR E++NGQCAIVAVNVHLGYNQEDSLVMNRASLERGMFR
Sbjct: 787  RTMLSDCLGRSKYDHHKGMLPRPEFFNGQCAIVAVNVHLGYNQEDSLVMNRASLERGMFR 846

Query: 723  SEHVRSYKADI--FXXXXXXXXXXXXIIFGKIESKIGRVDNLDDDGFPYVGARLKSGDII 896
            SEHVRSYKA++               + FGK++SKIGRVD+LDDDGFPY+GA L++GDI+
Sbjct: 847  SEHVRSYKAEVENSEAAGKKAKTDDLVSFGKMQSKIGRVDSLDDDGFPYIGANLQTGDIV 906

Query: 897  IGKYAEAGGDHSIKLKHGERGSVQKVVLSANDDGKNFATVSLRQVRSPSLGDKFSSMHGQ 1076
            IGK+A +G DHSIKLKH E+G VQKVVLSAND+GKNFA VSLRQVRSP LGDKFSSMHGQ
Sbjct: 907  IGKHAASGVDHSIKLKHTEKGMVQKVVLSANDEGKNFAVVSLRQVRSPCLGDKFSSMHGQ 966

Query: 1077 KGVLGFLESQENFPFTIQGIVPDIVINPHAFPSRQTPGQLLEAALGKGIALGGSLKYATP 1256
            KGVLGFLESQENFPFT QGIVPDIVINPHAFPSRQTPGQLLEAAL KGIALGG LKYATP
Sbjct: 967  KGVLGFLESQENFPFTKQGIVPDIVINPHAFPSRQTPGQLLEAALAKGIALGGGLKYATP 1026

Query: 1257 FSTPSVEAITDQLHRCGFSRWGNERVYDGRTGEKVESLVFMGPTFYQKLVHMSEDKVKFR 1436
            F++PSVE IT QLHR GFSRWG+ERVYDGRTGEKV+SL+FMGPTFYQ+L HM+EDKVKFR
Sbjct: 1027 FTSPSVEDITAQLHRLGFSRWGDERVYDGRTGEKVQSLIFMGPTFYQRLTHMAEDKVKFR 1086

Query: 1437 NIGPVHPLTRQP 1472
            N GPVHPLTRQP
Sbjct: 1087 NTGPVHPLTRQP 1098


>ref|XP_016481856.1| PREDICTED: DNA-directed RNA polymerases IV and V subunit 2-like
            [Nicotiana tabacum]
          Length = 1220

 Score =  723 bits (1867), Expect = 0.0
 Identities = 360/495 (72%), Positives = 409/495 (82%), Gaps = 5/495 (1%)
 Frame = +3

Query: 3    WVGVCDDATSLVANIRSKRRSKEVHYQVEIVQDDKNREVRIFTDAGRLMRPLLVVENIKN 182
            WVGVC+D+   V+ +R KRR  EV +QVE+ +D++  EVRIF+DAGR++RPLLVV N+K 
Sbjct: 621  WVGVCEDSALFVSKLRRKRRRNEVPHQVEVKRDEQQGEVRIFSDAGRILRPLLVVSNLKK 680

Query: 183  IKFLKERDYSFQSLLDHXXXXXXXXXXXXNCYTAWGVKYLFHDEPLEKTSPP--YTHCEL 356
            IK LK  DY FQSLLD+            +C TAWGV+YL      +K +PP  YTHCEL
Sbjct: 681  IKALKGGDYGFQSLLDNGIIELIGPEEEEDCRTAWGVEYLLK---ADKENPPAKYTHCEL 737

Query: 357  DGSFLLSLSCGIIPFANHDHAKRVLFQAQKHSQQAIGHSTTNPNIRVDTIAHNLFYPQKP 536
            D SFLL LSCGIIPFANHDHA+RVL+Q++KHSQQAIG ST NPNIRVDT  H L+YPQ+P
Sbjct: 738  DMSFLLGLSCGIIPFANHDHARRVLYQSEKHSQQAIGFSTVNPNIRVDTNTHQLYYPQRP 797

Query: 537  LFRTVLSDCLGAPKYGNGQR-LQPRDEYYNGQCAIVAVNVHLGYNQEDSLVMNRASLERG 713
            LFRT+LSD LG PKY   Q+ + PR EYYNGQCAIVAVNVHLGYNQEDSLVMNRASLERG
Sbjct: 798  LFRTMLSDSLGKPKYARCQKGMLPRPEYYNGQCAIVAVNVHLGYNQEDSLVMNRASLERG 857

Query: 714  MFRSEHVRSYKADIFXXXXXXXXXXXX--IIFGKIESKIGRVDNLDDDGFPYVGARLKSG 887
            MFRSEHVRSYKA++               + FGK +SKIGRVD+LDDDGFP++GA L+SG
Sbjct: 858  MFRSEHVRSYKAEVDNKEAIGKKLKIEDSVNFGKTQSKIGRVDSLDDDGFPFIGANLQSG 917

Query: 888  DIIIGKYAEAGGDHSIKLKHGERGSVQKVVLSANDDGKNFATVSLRQVRSPSLGDKFSSM 1067
            DIIIGKYAE+G DHS+KLKH ERG VQKV+LSAND+GKNFA VSLRQVRSP LGDKFSSM
Sbjct: 918  DIIIGKYAESGADHSVKLKHTERGMVQKVLLSANDEGKNFAVVSLRQVRSPCLGDKFSSM 977

Query: 1068 HGQKGVLGFLESQENFPFTIQGIVPDIVINPHAFPSRQTPGQLLEAALGKGIALGGSLKY 1247
            HGQKGVLGFLESQENFPFT QGIVPDIVINPHAFPSRQTPGQLLEAALGKGIALGG  KY
Sbjct: 978  HGQKGVLGFLESQENFPFTAQGIVPDIVINPHAFPSRQTPGQLLEAALGKGIALGGGQKY 1037

Query: 1248 ATPFSTPSVEAITDQLHRCGFSRWGNERVYDGRTGEKVESLVFMGPTFYQKLVHMSEDKV 1427
            ATPFST SV+AI +QLH  GFS+WGNERVY+GRTGE V++L+FMGPTFYQ+L+HM+EDKV
Sbjct: 1038 ATPFSTLSVDAIIEQLHGRGFSKWGNERVYNGRTGEMVQNLIFMGPTFYQRLIHMAEDKV 1097

Query: 1428 KFRNIGPVHPLTRQP 1472
            KFRN GPVHPLTRQP
Sbjct: 1098 KFRNTGPVHPLTRQP 1112


>gb|PIN04091.1| RNA polymerase II, second largest subunit [Handroanthus
            impetiginosus]
          Length = 1208

 Score =  723 bits (1865), Expect = 0.0
 Identities = 361/493 (73%), Positives = 410/493 (83%), Gaps = 3/493 (0%)
 Frame = +3

Query: 3    WVGVCDDATSLVANIRSKRRSKEVHYQVEIVQDDKNREVRIFTDAGRLMRPLLVVENIKN 182
            WVG+C D++S VA +R KRR  EV +Q+EI +D  + EVRIF DAGR++RPLLVV+N+K 
Sbjct: 609  WVGMCKDSSSFVAKLRRKRRRMEVPHQIEIKRDKHHGEVRIFADAGRILRPLLVVQNLKK 668

Query: 183  IKFLKERDYSFQSLLDHXXXXXXXXXXXXNCYTAWGVKYLFHDEPLEKTSPPYTHCELDG 362
            IK LK  D+ FQSLLD             +C TAWG++YLF  E LE     YTHCELD 
Sbjct: 669  IKDLKG-DFLFQSLLDGGIIELIGPEEEEDCQTAWGIRYLFTAE-LENPPMKYTHCELDS 726

Query: 363  SFLLSLSCGIIPFANHDHAKRVLFQAQKHSQQAIGHSTTNPNIRVDTIAHNLFYPQKPLF 542
            SFLL LSCGIIPFANHDHA+RVL+Q++KHSQQAIG STTNP+IR+DT +H L+YPQ+PLF
Sbjct: 727  SFLLGLSCGIIPFANHDHARRVLYQSEKHSQQAIGFSTTNPSIRIDTNSHQLYYPQRPLF 786

Query: 543  RTVLSDCLGAPKYGNGQR-LQPRDEYYNGQCAIVAVNVHLGYNQEDSLVMNRASLERGMF 719
            RTVLSDCLG  +Y +  + + PR E++NGQCAIVAVNVHLGYNQEDSLVMNRASLERGMF
Sbjct: 787  RTVLSDCLGKSRYADLHKAMPPRPEFFNGQCAIVAVNVHLGYNQEDSLVMNRASLERGMF 846

Query: 720  RSEHVRSYKADI--FXXXXXXXXXXXXIIFGKIESKIGRVDNLDDDGFPYVGARLKSGDI 893
            R+EHVRSYKA++               I FGK +SKIGRVD+LDDDGFPY+GA L++GDI
Sbjct: 847  RTEHVRSYKAEVENSEAAGKKIKADELISFGKTQSKIGRVDSLDDDGFPYIGANLQTGDI 906

Query: 894  IIGKYAEAGGDHSIKLKHGERGSVQKVVLSANDDGKNFATVSLRQVRSPSLGDKFSSMHG 1073
            +IGK+A +G DHSIKLKH ERG VQKVVLSAND+GKNFA VSLRQVRSP LGDKFSSMHG
Sbjct: 907  VIGKHAASGVDHSIKLKHTERGMVQKVVLSANDEGKNFAVVSLRQVRSPCLGDKFSSMHG 966

Query: 1074 QKGVLGFLESQENFPFTIQGIVPDIVINPHAFPSRQTPGQLLEAALGKGIALGGSLKYAT 1253
            QKGVLGFLESQENFPFT QGIVPDIVINPHAFPSRQTPGQLLEAALGKGIALGG LKYAT
Sbjct: 967  QKGVLGFLESQENFPFTKQGIVPDIVINPHAFPSRQTPGQLLEAALGKGIALGGGLKYAT 1026

Query: 1254 PFSTPSVEAITDQLHRCGFSRWGNERVYDGRTGEKVESLVFMGPTFYQKLVHMSEDKVKF 1433
            PFS+PSVE IT QLHR GFSRWG+ERVYDGRTGEKV+SL+FMGPTFYQ+L HM+EDKVKF
Sbjct: 1027 PFSSPSVEDITAQLHRLGFSRWGDERVYDGRTGEKVQSLIFMGPTFYQRLTHMAEDKVKF 1086

Query: 1434 RNIGPVHPLTRQP 1472
            RN GPVHPLTRQP
Sbjct: 1087 RNTGPVHPLTRQP 1099


>ref|XP_009605686.1| PREDICTED: DNA-directed RNA polymerases IV and V subunit 2 [Nicotiana
            tomentosiformis]
          Length = 1220

 Score =  721 bits (1862), Expect = 0.0
 Identities = 359/495 (72%), Positives = 409/495 (82%), Gaps = 5/495 (1%)
 Frame = +3

Query: 3    WVGVCDDATSLVANIRSKRRSKEVHYQVEIVQDDKNREVRIFTDAGRLMRPLLVVENIKN 182
            WVGVC+D+   V+ +R KRR  EV +QVE+ +D++  EVRIF+DAGR++RPLLVV N+K 
Sbjct: 621  WVGVCEDSALFVSKLRRKRRRNEVPHQVEVKRDEQQGEVRIFSDAGRILRPLLVVSNLKK 680

Query: 183  IKFLKERDYSFQSLLDHXXXXXXXXXXXXNCYTAWGVKYLFHDEPLEKTSPP--YTHCEL 356
            IK LK  DY FQSLLD+            +C TAWGV+YL      +K +PP  YTHCEL
Sbjct: 681  IKALKGGDYGFQSLLDNGIIELIGPEEEEDCRTAWGVEYLLK---ADKENPPAKYTHCEL 737

Query: 357  DGSFLLSLSCGIIPFANHDHAKRVLFQAQKHSQQAIGHSTTNPNIRVDTIAHNLFYPQKP 536
            D SFLL LSCGIIPFANHDHA+RVL+Q++KHSQQAIG ST NPNIRVDT  H L+YPQ+P
Sbjct: 738  DMSFLLGLSCGIIPFANHDHARRVLYQSEKHSQQAIGFSTVNPNIRVDTNTHQLYYPQRP 797

Query: 537  LFRTVLSDCLGAPKYGNGQR-LQPRDEYYNGQCAIVAVNVHLGYNQEDSLVMNRASLERG 713
            LFRT+LSD LG PKY   Q+ + PR EYYNGQCAIVAVNVHLGYNQEDSLVMNRASLERG
Sbjct: 798  LFRTMLSDSLGKPKYARCQKGMLPRPEYYNGQCAIVAVNVHLGYNQEDSLVMNRASLERG 857

Query: 714  MFRSEHVRSYKADIFXXXXXXXXXXXX--IIFGKIESKIGRVDNLDDDGFPYVGARLKSG 887
            MFRSEHVRSYKA++               + FGK +SKIGRVD+LDDDGFP++GA L+SG
Sbjct: 858  MFRSEHVRSYKAEVDNKEAIGKKLKIEDSVNFGKTQSKIGRVDSLDDDGFPFIGANLQSG 917

Query: 888  DIIIGKYAEAGGDHSIKLKHGERGSVQKVVLSANDDGKNFATVSLRQVRSPSLGDKFSSM 1067
            DIIIGK+AE+G DHS+KLKH ERG VQKV+LSAND+GKNFA VSLRQVRSP LGDKFSSM
Sbjct: 918  DIIIGKHAESGADHSVKLKHTERGMVQKVLLSANDEGKNFAVVSLRQVRSPCLGDKFSSM 977

Query: 1068 HGQKGVLGFLESQENFPFTIQGIVPDIVINPHAFPSRQTPGQLLEAALGKGIALGGSLKY 1247
            HGQKGVLGFLESQENFPFT QGIVPDIVINPHAFPSRQTPGQLLEAALGKGIALGG  KY
Sbjct: 978  HGQKGVLGFLESQENFPFTAQGIVPDIVINPHAFPSRQTPGQLLEAALGKGIALGGGQKY 1037

Query: 1248 ATPFSTPSVEAITDQLHRCGFSRWGNERVYDGRTGEKVESLVFMGPTFYQKLVHMSEDKV 1427
            ATPFST SV+AI +QLH  GFS+WGNERVY+GRTGE V++L+FMGPTFYQ+L+HM+EDKV
Sbjct: 1038 ATPFSTLSVDAIIEQLHGRGFSKWGNERVYNGRTGEMVQNLIFMGPTFYQRLIHMAEDKV 1097

Query: 1428 KFRNIGPVHPLTRQP 1472
            KFRN GPVHPLTRQP
Sbjct: 1098 KFRNTGPVHPLTRQP 1112


>ref|XP_018839587.1| PREDICTED: DNA-directed RNA polymerase D subunit 2b-like [Juglans
            regia]
          Length = 1191

 Score =  720 bits (1859), Expect = 0.0
 Identities = 355/493 (72%), Positives = 411/493 (83%), Gaps = 3/493 (0%)
 Frame = +3

Query: 3    WVGVCDDATSLVANIRSKRRSKEVHYQVEIVQDDKNREVRIFTDAGRLMRPLLVVENIKN 182
            WVGVC+D+ S VA +R+KRR K + +QVEI +D+++ EVRIF+DAGR++RPLLVVEN+  
Sbjct: 591  WVGVCEDSISFVAELRNKRRQKLLPHQVEIKRDEQHEEVRIFSDAGRILRPLLVVENLNK 650

Query: 183  IKFLKERDYSFQSLLDHXXXXXXXXXXXXNCYTAWGVKYLFHDEPLEKTSPPYTHCELDG 362
            +K  K  +Y+FQ LLD             +C TAWG+KYLF ++   K+   YTHCELD 
Sbjct: 651  VKGYKGENYTFQYLLDKGIIELIGTEEEEDCRTAWGIKYLFMEKE-GKSPAQYTHCELDM 709

Query: 363  SFLLSLSCGIIPFANHDHAKRVLFQAQKHSQQAIGHSTTNPNIRVDTIAHNLFYPQKPLF 542
            SFLL LSCGI+P+ANHDHA+RVL+Q+QKHS QAIG STTNPNIRVDT++H+L YPQ+PLF
Sbjct: 710  SFLLGLSCGIVPYANHDHARRVLYQSQKHSSQAIGFSTTNPNIRVDTLSHSLLYPQRPLF 769

Query: 543  RTVLSDCLGAPKYGNGQR-LQPRDEYYNGQCAIVAVNVHLGYNQEDSLVMNRASLERGMF 719
            RT+ SDCLG P    G   + P+ E YNGQ AIVAVNVHLGYNQEDSLVMN+ASLERGMF
Sbjct: 770  RTIASDCLGKPGSPLGHHGILPKPELYNGQNAIVAVNVHLGYNQEDSLVMNKASLERGMF 829

Query: 720  RSEHVRSYKADIFXXXXXXXXXXXX--IIFGKIESKIGRVDNLDDDGFPYVGARLKSGDI 893
            RSEH+RSYKA++               + FGKI+SKIGRVD+LDDDGFP++GA L+SGDI
Sbjct: 830  RSEHIRSYKAEVDNKETLEKRRKPDDCVNFGKIQSKIGRVDSLDDDGFPFIGANLQSGDI 889

Query: 894  IIGKYAEAGGDHSIKLKHGERGSVQKVVLSANDDGKNFATVSLRQVRSPSLGDKFSSMHG 1073
            +IG+ AE+G DHSIKLKH ERG VQKVVLS+NDDGKNFA VSLRQVRSP LGDKFSSMHG
Sbjct: 890  VIGRCAESGNDHSIKLKHTERGMVQKVVLSSNDDGKNFAVVSLRQVRSPCLGDKFSSMHG 949

Query: 1074 QKGVLGFLESQENFPFTIQGIVPDIVINPHAFPSRQTPGQLLEAALGKGIALGGSLKYAT 1253
            QKGVLGFLESQENFPFTIQGIVPDIVINPHAFPSRQTPGQLLEAALGKGIA GGSL+YAT
Sbjct: 950  QKGVLGFLESQENFPFTIQGIVPDIVINPHAFPSRQTPGQLLEAALGKGIACGGSLRYAT 1009

Query: 1254 PFSTPSVEAITDQLHRCGFSRWGNERVYDGRTGEKVESLVFMGPTFYQKLVHMSEDKVKF 1433
            PFST SV+AIT+QLHR GFSRWGNERVY+GRTGE+V SL+FMGPTFYQ+L+HMSEDKVKF
Sbjct: 1010 PFSTLSVDAITEQLHRAGFSRWGNERVYNGRTGERVRSLIFMGPTFYQRLIHMSEDKVKF 1069

Query: 1434 RNIGPVHPLTRQP 1472
            RN GPVHPLTRQP
Sbjct: 1070 RNTGPVHPLTRQP 1082


>ref|XP_002283296.1| PREDICTED: DNA-directed RNA polymerases IV and V subunit 2 [Vitis
            vinifera]
 ref|XP_010648748.1| PREDICTED: DNA-directed RNA polymerases IV and V subunit 2 [Vitis
            vinifera]
          Length = 1198

 Score =  720 bits (1859), Expect = 0.0
 Identities = 354/495 (71%), Positives = 412/495 (83%), Gaps = 5/495 (1%)
 Frame = +3

Query: 3    WVGVCDDATSLVANIRSKRRSKEVHYQVEIVQDDKNREVRIFTDAGRLMRPLLVVENIKN 182
            WVGVC+D  S V  +R+KRR KE+  QVEI +D++  EVRIF+DAGR++RPLLVVEN+K 
Sbjct: 599  WVGVCEDPISFVVELRTKRRHKELPQQVEIKRDEQQGEVRIFSDAGRILRPLLVVENLKK 658

Query: 183  IKFLKERDYSFQSLLDHXXXXXXXXXXXXNCYTAWGVKYLF--HDEPLEKTSPPYTHCEL 356
            +K  K  D++FQSLLD             +C TAWG+KYL   HD+P  K    YTHCEL
Sbjct: 659  VKTFKGDDFTFQSLLDKGIVELIGAEEEEDCSTAWGIKYLLKGHDDPPVK----YTHCEL 714

Query: 357  DGSFLLSLSCGIIPFANHDHAKRVLFQAQKHSQQAIGHSTTNPNIRVDTIAHNLFYPQKP 536
            D SFLL LSCGIIP+ANHDHA+RVL+Q++KHSQQAIG STTNPNIRVDT++H L+YPQ+P
Sbjct: 715  DMSFLLGLSCGIIPYANHDHARRVLYQSEKHSQQAIGFSTTNPNIRVDTLSHQLYYPQRP 774

Query: 537  LFRTVLSDCLGAPKYGNGQR-LQPRDEYYNGQCAIVAVNVHLGYNQEDSLVMNRASLERG 713
            LFRT++SDCLG P Y  G + + PR EY+NGQ AIVAVNVHLGYNQEDSLVMNRASLERG
Sbjct: 775  LFRTMISDCLGKPGYSEGHKGIVPRPEYFNGQIAIVAVNVHLGYNQEDSLVMNRASLERG 834

Query: 714  MFRSEHVRSYKADIFXXXXXXXXXXXX--IIFGKIESKIGRVDNLDDDGFPYVGARLKSG 887
            MFRSEH+RSYK+++               + FGK++SKIGRVD+LDDDGFP++GA L++G
Sbjct: 835  MFRSEHIRSYKSEVDNNESLDKKRKSEDSVHFGKMQSKIGRVDSLDDDGFPFIGANLQNG 894

Query: 888  DIIIGKYAEAGGDHSIKLKHGERGSVQKVVLSANDDGKNFATVSLRQVRSPSLGDKFSSM 1067
            DI+IG+ AE+G DHSIKLKH ERG VQKVV+SANDDGKNFA VSLRQVR+P LGDKFSSM
Sbjct: 895  DIVIGRCAESGVDHSIKLKHTERGMVQKVVVSANDDGKNFAVVSLRQVRTPCLGDKFSSM 954

Query: 1068 HGQKGVLGFLESQENFPFTIQGIVPDIVINPHAFPSRQTPGQLLEAALGKGIALGGSLKY 1247
            HGQKGVLGFLESQENFPFTIQGIVPDIVINPHAFPSRQTPGQLLEAALGKGIA GG L++
Sbjct: 955  HGQKGVLGFLESQENFPFTIQGIVPDIVINPHAFPSRQTPGQLLEAALGKGIACGGLLRH 1014

Query: 1248 ATPFSTPSVEAITDQLHRCGFSRWGNERVYDGRTGEKVESLVFMGPTFYQKLVHMSEDKV 1427
            ATPFST SV+AI DQLHR GFSRWG+ERVY+GRTGE + SL+FMGPTFYQ+L+HM+EDKV
Sbjct: 1015 ATPFSTLSVDAIADQLHRAGFSRWGHERVYNGRTGEMLRSLIFMGPTFYQRLIHMAEDKV 1074

Query: 1428 KFRNIGPVHPLTRQP 1472
            KFRN GPVHPLTRQP
Sbjct: 1075 KFRNTGPVHPLTRQP 1089


>gb|PHU23638.1| DNA-directed RNA polymerases IV and V subunit 2 [Capsicum chinense]
          Length = 1217

 Score =  718 bits (1854), Expect = 0.0
 Identities = 358/495 (72%), Positives = 405/495 (81%), Gaps = 5/495 (1%)
 Frame = +3

Query: 3    WVGVCDDATSLVANIRSKRRSKEVHYQVEIVQDDKNREVRIFTDAGRLMRPLLVVENIKN 182
            WVGVC+D+   V+ +R KRR  EV +QVE+ +D+   EVRIF+DAGR++RPLLVV N+K 
Sbjct: 618  WVGVCEDSALFVSKLRRKRRRNEVPHQVEVKRDELQGEVRIFSDAGRILRPLLVVSNLKK 677

Query: 183  IKFLKERDYSFQSLLDHXXXXXXXXXXXXNCYTAWGVKYLFHDEPLEKTSPP--YTHCEL 356
            IK LK  DY FQSLLD+            +C TAWGV+Y+      +K  PP  YTHCEL
Sbjct: 678  IKALKGGDYGFQSLLDNGIIELIGPEEEEDCRTAWGVEYILK---ADKEDPPAKYTHCEL 734

Query: 357  DGSFLLSLSCGIIPFANHDHAKRVLFQAQKHSQQAIGHSTTNPNIRVDTIAHNLFYPQKP 536
            D S LL LSCGIIPFANHDHA+RVL+Q++KHSQQAIG ST NPNIRVDT  H L+YPQ+P
Sbjct: 735  DMSLLLGLSCGIIPFANHDHARRVLYQSEKHSQQAIGFSTVNPNIRVDTNTHQLYYPQRP 794

Query: 537  LFRTVLSDCLGAPKYGNGQR-LQPRDEYYNGQCAIVAVNVHLGYNQEDSLVMNRASLERG 713
            LFRT+L+D LG PK    Q+ + PR EY+NGQCAIVAVNVHLGYNQEDSLVMNRASLERG
Sbjct: 795  LFRTMLADSLGKPKCARSQKGMLPRPEYFNGQCAIVAVNVHLGYNQEDSLVMNRASLERG 854

Query: 714  MFRSEHVRSYKADIFXXXXXXXXXXXX--IIFGKIESKIGRVDNLDDDGFPYVGARLKSG 887
            MFRSEHVRSYKAD+               + FGK +SKIGRVD+LDDDGFP++GA L+SG
Sbjct: 855  MFRSEHVRSYKADVDNKEAVAKKLKIEDSVNFGKTQSKIGRVDSLDDDGFPFIGANLQSG 914

Query: 888  DIIIGKYAEAGGDHSIKLKHGERGSVQKVVLSANDDGKNFATVSLRQVRSPSLGDKFSSM 1067
            DIIIGKY+E+G DHSIKLKH ERG VQKV+LSAND+GKNFA VSLRQVRSP LGDKFSSM
Sbjct: 915  DIIIGKYSESGSDHSIKLKHTERGMVQKVLLSANDEGKNFAVVSLRQVRSPCLGDKFSSM 974

Query: 1068 HGQKGVLGFLESQENFPFTIQGIVPDIVINPHAFPSRQTPGQLLEAALGKGIALGGSLKY 1247
            HGQKGVLGFLESQENFPFT+QGIVPDIVINPHAFPSRQTPGQLLEA+LGKGIALGG  KY
Sbjct: 975  HGQKGVLGFLESQENFPFTVQGIVPDIVINPHAFPSRQTPGQLLEASLGKGIALGGGQKY 1034

Query: 1248 ATPFSTPSVEAITDQLHRCGFSRWGNERVYDGRTGEKVESLVFMGPTFYQKLVHMSEDKV 1427
            ATPFST SV+AI DQLH  GFSRWGNERVY+GRTGE V SL+FMGPTFYQ+L+HM+EDKV
Sbjct: 1035 ATPFSTLSVDAIMDQLHARGFSRWGNERVYNGRTGEMVHSLIFMGPTFYQRLIHMAEDKV 1094

Query: 1428 KFRNIGPVHPLTRQP 1472
            KFRN GPVHPLTRQP
Sbjct: 1095 KFRNTGPVHPLTRQP 1109


>gb|PHT87914.1| DNA-directed RNA polymerases IV and V subunit 2 [Capsicum annuum]
          Length = 1217

 Score =  718 bits (1854), Expect = 0.0
 Identities = 358/495 (72%), Positives = 405/495 (81%), Gaps = 5/495 (1%)
 Frame = +3

Query: 3    WVGVCDDATSLVANIRSKRRSKEVHYQVEIVQDDKNREVRIFTDAGRLMRPLLVVENIKN 182
            WVGVC+D+   V+ +R KRR  EV +QVE+ +D+   EVRIF+DAGR++RPLLVV N+K 
Sbjct: 618  WVGVCEDSALFVSKLRRKRRRNEVPHQVEVKRDELQGEVRIFSDAGRILRPLLVVSNLKK 677

Query: 183  IKFLKERDYSFQSLLDHXXXXXXXXXXXXNCYTAWGVKYLFHDEPLEKTSPP--YTHCEL 356
            IK LK  DY FQSLLD+            +C TAWGV+Y+      +K  PP  YTHCEL
Sbjct: 678  IKALKGGDYGFQSLLDNGIIELIGPEEEEDCRTAWGVEYILK---ADKEDPPAKYTHCEL 734

Query: 357  DGSFLLSLSCGIIPFANHDHAKRVLFQAQKHSQQAIGHSTTNPNIRVDTIAHNLFYPQKP 536
            D S LL LSCGIIPFANHDHA+RVL+Q++KHSQQAIG ST NPNIRVDT  H L+YPQ+P
Sbjct: 735  DMSLLLGLSCGIIPFANHDHARRVLYQSEKHSQQAIGFSTVNPNIRVDTNTHQLYYPQRP 794

Query: 537  LFRTVLSDCLGAPKYGNGQR-LQPRDEYYNGQCAIVAVNVHLGYNQEDSLVMNRASLERG 713
            LFRT+L+D LG PK    Q+ + PR EY+NGQCAIVAVNVHLGYNQEDSLVMNRASLERG
Sbjct: 795  LFRTMLADSLGKPKCARSQKGMLPRPEYFNGQCAIVAVNVHLGYNQEDSLVMNRASLERG 854

Query: 714  MFRSEHVRSYKADIFXXXXXXXXXXXX--IIFGKIESKIGRVDNLDDDGFPYVGARLKSG 887
            MFRSEHVRSYKAD+               + FGK +SKIGRVD+LDDDGFP++GA L+SG
Sbjct: 855  MFRSEHVRSYKADVDNKEAVAKKLKIEDSVNFGKTQSKIGRVDSLDDDGFPFIGANLQSG 914

Query: 888  DIIIGKYAEAGGDHSIKLKHGERGSVQKVVLSANDDGKNFATVSLRQVRSPSLGDKFSSM 1067
            DIIIGKY+E+G DHSIKLKH ERG VQKV+LSAND+GKNFA VSLRQVRSP LGDKFSSM
Sbjct: 915  DIIIGKYSESGSDHSIKLKHTERGMVQKVLLSANDEGKNFAVVSLRQVRSPCLGDKFSSM 974

Query: 1068 HGQKGVLGFLESQENFPFTIQGIVPDIVINPHAFPSRQTPGQLLEAALGKGIALGGSLKY 1247
            HGQKGVLGFLESQENFPFT+QGIVPDIVINPHAFPSRQTPGQLLEA+LGKGIALGG  KY
Sbjct: 975  HGQKGVLGFLESQENFPFTVQGIVPDIVINPHAFPSRQTPGQLLEASLGKGIALGGGQKY 1034

Query: 1248 ATPFSTPSVEAITDQLHRCGFSRWGNERVYDGRTGEKVESLVFMGPTFYQKLVHMSEDKV 1427
            ATPFST SV+AI DQLH  GFSRWGNERVY+GRTGE V SL+FMGPTFYQ+L+HM+EDKV
Sbjct: 1035 ATPFSTLSVDAIMDQLHARGFSRWGNERVYNGRTGEMVHSLIFMGPTFYQRLIHMAEDKV 1094

Query: 1428 KFRNIGPVHPLTRQP 1472
            KFRN GPVHPLTRQP
Sbjct: 1095 KFRNTGPVHPLTRQP 1109


>gb|PHT53681.1| hypothetical protein CQW23_08143 [Capsicum baccatum]
          Length = 1217

 Score =  718 bits (1854), Expect = 0.0
 Identities = 358/495 (72%), Positives = 405/495 (81%), Gaps = 5/495 (1%)
 Frame = +3

Query: 3    WVGVCDDATSLVANIRSKRRSKEVHYQVEIVQDDKNREVRIFTDAGRLMRPLLVVENIKN 182
            WVGVC+D+   V+ +R KRR  EV +QVE+ +D+   EVRIF+DAGR++RPLLVV N+K 
Sbjct: 618  WVGVCEDSALFVSKLRRKRRRNEVPHQVEVKRDELQGEVRIFSDAGRILRPLLVVSNLKK 677

Query: 183  IKFLKERDYSFQSLLDHXXXXXXXXXXXXNCYTAWGVKYLFHDEPLEKTSPP--YTHCEL 356
            IK LK  DY FQSLLD+            +C TAWGV+Y+      +K  PP  YTHCEL
Sbjct: 678  IKALKGGDYGFQSLLDNGIIELIGPEEEEDCRTAWGVEYILK---ADKEDPPAKYTHCEL 734

Query: 357  DGSFLLSLSCGIIPFANHDHAKRVLFQAQKHSQQAIGHSTTNPNIRVDTIAHNLFYPQKP 536
            D S LL LSCGIIPFANHDHA+RVL+Q++KHSQQAIG ST NPNIRVDT  H L+YPQ+P
Sbjct: 735  DMSLLLGLSCGIIPFANHDHARRVLYQSEKHSQQAIGFSTVNPNIRVDTNTHQLYYPQRP 794

Query: 537  LFRTVLSDCLGAPKYGNGQR-LQPRDEYYNGQCAIVAVNVHLGYNQEDSLVMNRASLERG 713
            LFRT+L+D LG PK    Q+ + PR EY+NGQCAIVAVNVHLGYNQEDSLVMNRASLERG
Sbjct: 795  LFRTMLADSLGKPKCARSQKGMLPRPEYFNGQCAIVAVNVHLGYNQEDSLVMNRASLERG 854

Query: 714  MFRSEHVRSYKADIFXXXXXXXXXXXX--IIFGKIESKIGRVDNLDDDGFPYVGARLKSG 887
            MFRSEHVRSYKAD+               + FGK +SKIGRVD+LDDDGFP++GA L+SG
Sbjct: 855  MFRSEHVRSYKADVDNKEAVAKKLKIEDSVNFGKTQSKIGRVDSLDDDGFPFIGANLQSG 914

Query: 888  DIIIGKYAEAGGDHSIKLKHGERGSVQKVVLSANDDGKNFATVSLRQVRSPSLGDKFSSM 1067
            DIIIGKY+E+G DHSIKLKH ERG VQKV+LSAND+GKNFA VSLRQVRSP LGDKFSSM
Sbjct: 915  DIIIGKYSESGSDHSIKLKHTERGMVQKVLLSANDEGKNFAVVSLRQVRSPCLGDKFSSM 974

Query: 1068 HGQKGVLGFLESQENFPFTIQGIVPDIVINPHAFPSRQTPGQLLEAALGKGIALGGSLKY 1247
            HGQKGVLGFLESQENFPFT+QGIVPDIVINPHAFPSRQTPGQLLEA+LGKGIALGG  KY
Sbjct: 975  HGQKGVLGFLESQENFPFTVQGIVPDIVINPHAFPSRQTPGQLLEASLGKGIALGGGQKY 1034

Query: 1248 ATPFSTPSVEAITDQLHRCGFSRWGNERVYDGRTGEKVESLVFMGPTFYQKLVHMSEDKV 1427
            ATPFST SV+AI DQLH  GFSRWGNERVY+GRTGE V SL+FMGPTFYQ+L+HM+EDKV
Sbjct: 1035 ATPFSTLSVDAIMDQLHARGFSRWGNERVYNGRTGEMVHSLIFMGPTFYQRLIHMAEDKV 1094

Query: 1428 KFRNIGPVHPLTRQP 1472
            KFRN GPVHPLTRQP
Sbjct: 1095 KFRNTGPVHPLTRQP 1109


>ref|XP_016563842.1| PREDICTED: DNA-directed RNA polymerases IV and V subunit 2-like
            [Capsicum annuum]
 ref|XP_016563843.1| PREDICTED: DNA-directed RNA polymerases IV and V subunit 2-like
            [Capsicum annuum]
          Length = 1217

 Score =  718 bits (1854), Expect = 0.0
 Identities = 358/495 (72%), Positives = 405/495 (81%), Gaps = 5/495 (1%)
 Frame = +3

Query: 3    WVGVCDDATSLVANIRSKRRSKEVHYQVEIVQDDKNREVRIFTDAGRLMRPLLVVENIKN 182
            WVGVC+D+   V+ +R KRR  EV +QVE+ +D+   EVRIF+DAGR++RPLLVV N+K 
Sbjct: 618  WVGVCEDSALFVSKLRRKRRRNEVPHQVEVKRDELQGEVRIFSDAGRILRPLLVVSNLKK 677

Query: 183  IKFLKERDYSFQSLLDHXXXXXXXXXXXXNCYTAWGVKYLFHDEPLEKTSPP--YTHCEL 356
            IK LK  DY FQSLLD+            +C TAWGV+Y+      +K  PP  YTHCEL
Sbjct: 678  IKALKGGDYGFQSLLDNGIIELIGPEEEEDCRTAWGVEYILK---ADKEDPPAKYTHCEL 734

Query: 357  DGSFLLSLSCGIIPFANHDHAKRVLFQAQKHSQQAIGHSTTNPNIRVDTIAHNLFYPQKP 536
            D S LL LSCGIIPFANHDHA+RVL+Q++KHSQQAIG ST NPNIRVDT  H L+YPQ+P
Sbjct: 735  DMSLLLGLSCGIIPFANHDHARRVLYQSEKHSQQAIGFSTVNPNIRVDTNTHQLYYPQRP 794

Query: 537  LFRTVLSDCLGAPKYGNGQR-LQPRDEYYNGQCAIVAVNVHLGYNQEDSLVMNRASLERG 713
            LFRT+L+D LG PK    Q+ + PR EY+NGQCAIVAVNVHLGYNQEDSLVMNRASLERG
Sbjct: 795  LFRTMLADSLGKPKCARSQKGMLPRPEYFNGQCAIVAVNVHLGYNQEDSLVMNRASLERG 854

Query: 714  MFRSEHVRSYKADIFXXXXXXXXXXXX--IIFGKIESKIGRVDNLDDDGFPYVGARLKSG 887
            MFRSEHVRSYKAD+               + FGK +SKIGRVD+LDDDGFP++GA L+SG
Sbjct: 855  MFRSEHVRSYKADVDNKEAVAKKLKIEDSVNFGKTQSKIGRVDSLDDDGFPFIGANLQSG 914

Query: 888  DIIIGKYAEAGGDHSIKLKHGERGSVQKVVLSANDDGKNFATVSLRQVRSPSLGDKFSSM 1067
            DIIIGKY+E+G DHSIKLKH ERG VQKV+LSAND+GKNFA VSLRQVRSP LGDKFSSM
Sbjct: 915  DIIIGKYSESGSDHSIKLKHTERGMVQKVLLSANDEGKNFAVVSLRQVRSPCLGDKFSSM 974

Query: 1068 HGQKGVLGFLESQENFPFTIQGIVPDIVINPHAFPSRQTPGQLLEAALGKGIALGGSLKY 1247
            HGQKGVLGFLESQENFPFT+QGIVPDIVINPHAFPSRQTPGQLLEA+LGKGIALGG  KY
Sbjct: 975  HGQKGVLGFLESQENFPFTVQGIVPDIVINPHAFPSRQTPGQLLEASLGKGIALGGGQKY 1034

Query: 1248 ATPFSTPSVEAITDQLHRCGFSRWGNERVYDGRTGEKVESLVFMGPTFYQKLVHMSEDKV 1427
            ATPFST SV+AI DQLH  GFSRWGNERVY+GRTGE V SL+FMGPTFYQ+L+HM+EDKV
Sbjct: 1035 ATPFSTLSVDAIMDQLHARGFSRWGNERVYNGRTGEMVHSLIFMGPTFYQRLIHMAEDKV 1094

Query: 1428 KFRNIGPVHPLTRQP 1472
            KFRN GPVHPLTRQP
Sbjct: 1095 KFRNTGPVHPLTRQP 1109


>gb|OMO69360.1| hypothetical protein COLO4_29107 [Corchorus olitorius]
          Length = 1034

 Score =  712 bits (1837), Expect = 0.0
 Identities = 363/508 (71%), Positives = 409/508 (80%), Gaps = 18/508 (3%)
 Frame = +3

Query: 3    WVGVCDDATSLVANIRSKRRSKEVHYQVEIVQDDKNREVRIFTDAGRLMRPLLVVENIKN 182
            WVGVC+D+ S  A +R KRR  E+ +QVEI +D+   EVRIFTDAGR++RPLLVV+N+  
Sbjct: 419  WVGVCEDSLSFAAEVRRKRRMTELPHQVEIKRDEHKGEVRIFTDAGRILRPLLVVKNLSK 478

Query: 183  IKFLK-ERDYSFQSLLDHXXXXXXXXXXXXNCYTAWGVKYLFHDEPLEKTSPPYTHCELD 359
            IK  K E++++FQSLLD             +C  AWG+KYL  D   EK S  YTHCELD
Sbjct: 479  IKAFKAEKNFTFQSLLDKGIIELIGTEEEEDCRNAWGIKYLLADVK-EKESVKYTHCELD 537

Query: 360  GSFLLSLSCGIIPFANHDHAKRVLFQAQKHSQQAIGHSTTNPNIRVDTIAHNLFYPQKPL 539
             SFLL LSCGIIPFANHDHA+RVL+QAQKHSQQAIG STTNPNIRVDT++H ++YPQ+PL
Sbjct: 538  MSFLLGLSCGIIPFANHDHARRVLYQAQKHSQQAIGFSTTNPNIRVDTLSHQMYYPQRPL 597

Query: 540  FRTVLSDCLGAPKYGNGQR-LQPRDEYYNGQCAIVAVNVHLGYNQEDSLVMNRASLERGM 716
            FRT+ SDCLG P Y  GQ  L+P+ E YNGQ AIVAVNVHLGYNQEDSLVMNRASLERGM
Sbjct: 598  FRTMTSDCLGKPGYPLGQNGLEPKPELYNGQIAIVAVNVHLGYNQEDSLVMNRASLERGM 657

Query: 717  FRSEHVRSYKADIFXXXXXXXXXXXXII--FGKIESKIGRVDNLDDDGFPYVGARLKSGD 890
            FRSEHVRSYKA++              I  FGKI+SKIGRVD+LDDDGFPYVGA L+SGD
Sbjct: 658  FRSEHVRSYKAEVDNQEMSDKKRKLEDIVNFGKIQSKIGRVDSLDDDGFPYVGASLQSGD 717

Query: 891  IIIGKYAEAGGD--------------HSIKLKHGERGSVQKVVLSANDDGKNFATVSLRQ 1028
            I+IG+ AE+  D              HSIKLKH ERG VQKVVLS+ND+GKNFA VSLRQ
Sbjct: 718  IVIGRCAESEPDNSKTDANVAERRLDHSIKLKHTERGMVQKVVLSSNDEGKNFAVVSLRQ 777

Query: 1029 VRSPSLGDKFSSMHGQKGVLGFLESQENFPFTIQGIVPDIVINPHAFPSRQTPGQLLEAA 1208
            VRSP LGDKFSSMHGQKGVLGFLESQENFPFT QGIVPDIVINPHAFP+RQTPGQLLEAA
Sbjct: 778  VRSPCLGDKFSSMHGQKGVLGFLESQENFPFTTQGIVPDIVINPHAFPTRQTPGQLLEAA 837

Query: 1209 LGKGIALGGSLKYATPFSTPSVEAITDQLHRCGFSRWGNERVYDGRTGEKVESLVFMGPT 1388
            LGKGIA GGSLKYATPFST SV+AIT+QLHR GFSRWG+ERVY+GRTGE V SL+FMGPT
Sbjct: 838  LGKGIACGGSLKYATPFSTLSVDAITEQLHRAGFSRWGHERVYNGRTGEMVRSLIFMGPT 897

Query: 1389 FYQKLVHMSEDKVKFRNIGPVHPLTRQP 1472
            FYQ+L+HM+EDKVKFRN GPVHPLTRQP
Sbjct: 898  FYQRLIHMAEDKVKFRNTGPVHPLTRQP 925


>emb|CDP09677.1| unnamed protein product [Coffea canephora]
          Length = 1213

 Score =  716 bits (1849), Expect = 0.0
 Identities = 353/492 (71%), Positives = 403/492 (81%), Gaps = 2/492 (0%)
 Frame = +3

Query: 3    WVGVCDDATSLVANIRSKRRSKEVHYQVEIVQDDKNREVRIFTDAGRLMRPLLVVENIKN 182
            W+G C D+   VA +RSKRR+KE+  QVEI +D+ + E+RIF+DAGR++RPLLVVEN+K 
Sbjct: 614  WIGTCKDSAFFVAELRSKRRNKEIPPQVEIKRDEHHGEIRIFSDAGRVLRPLLVVENLKK 673

Query: 183  IKFLKERDYSFQSLLDHXXXXXXXXXXXXNCYTAWGVKYLFHDEPLEKTSPPYTHCELDG 362
            IK LK  +YSFQSLLD             +C TAW + YL+     E  S  YTHCELD 
Sbjct: 674  IKDLKGENYSFQSLLDKGIIELIGPEEEEDCPTAWAIDYLYTGNR-ENPSMKYTHCELDM 732

Query: 363  SFLLSLSCGIIPFANHDHAKRVLFQAQKHSQQAIGHSTTNPNIRVDTIAHNLFYPQKPLF 542
            SFLL LSCGIIP+ANHDHA+RVL+Q++KHSQQAIG STTNP+IRVDT  H L+YPQ+PLF
Sbjct: 733  SFLLGLSCGIIPYANHDHARRVLYQSEKHSQQAIGFSTTNPSIRVDTNIHQLYYPQRPLF 792

Query: 543  RTVLSDCLGAPKYGNGQRLQPRDEYYNGQCAIVAVNVHLGYNQEDSLVMNRASLERGMFR 722
             T+LSDCL  P Y   + + PR EYYNGQCAIVAVNVHLGYNQEDSLVMNRASLERGMFR
Sbjct: 793  CTMLSDCLWKPAYPRHRGMLPRPEYYNGQCAIVAVNVHLGYNQEDSLVMNRASLERGMFR 852

Query: 723  SEHVRSYKADIFXXXXXXXXXXXX--IIFGKIESKIGRVDNLDDDGFPYVGARLKSGDII 896
            SEH+RSYK+DI               + FGK+ SKIGRVD+LDDDGFP++GA L++GDI+
Sbjct: 853  SEHIRSYKSDIDEKHNLGKKHKSEDEVKFGKMPSKIGRVDSLDDDGFPFIGASLQTGDIV 912

Query: 897  IGKYAEAGGDHSIKLKHGERGSVQKVVLSANDDGKNFATVSLRQVRSPSLGDKFSSMHGQ 1076
            IGKY+E+G DHS+KLKH ERG VQKVVLSA+DDGKNFA VSLRQVRSPSLGDKFSSMHGQ
Sbjct: 913  IGKYSESGADHSVKLKHTERGMVQKVVLSADDDGKNFAVVSLRQVRSPSLGDKFSSMHGQ 972

Query: 1077 KGVLGFLESQENFPFTIQGIVPDIVINPHAFPSRQTPGQLLEAALGKGIALGGSLKYATP 1256
            KGVLGFLESQENFPFT QGIVPDIVINPHAFPSRQTPGQLLEAAL KGIALGG  KYATP
Sbjct: 973  KGVLGFLESQENFPFTAQGIVPDIVINPHAFPSRQTPGQLLEAALAKGIALGGVQKYATP 1032

Query: 1257 FSTPSVEAITDQLHRCGFSRWGNERVYDGRTGEKVESLVFMGPTFYQKLVHMSEDKVKFR 1436
            FS  SV+A+TDQLHR GFSRWGNERVY GRTGE + S++FMGPTFYQ+L+HM+EDKVKFR
Sbjct: 1033 FSALSVDAVTDQLHRLGFSRWGNERVYSGRTGEMIHSMIFMGPTFYQRLIHMAEDKVKFR 1092

Query: 1437 NIGPVHPLTRQP 1472
            N GPVHPLTRQP
Sbjct: 1093 NTGPVHPLTRQP 1104


>gb|OTF95570.1| putative RNA polymerase, beta subunit, protrusion, DNA-directed RNA
            polymerase, subunit 2 [Helianthus annuus]
          Length = 1170

 Score =  715 bits (1845), Expect = 0.0
 Identities = 356/494 (72%), Positives = 408/494 (82%), Gaps = 4/494 (0%)
 Frame = +3

Query: 3    WVGVCDDATSLVANIRSKRRSKEVHYQVEIVQDDKNREVRIFTDAGRLMRPLLVVENIKN 182
            WVG C D+ S VA  RSKRR K+V +QVEI +D K++EVRIF DAGR++RPLLVV+N+  
Sbjct: 569  WVGTCKDSASFVAEFRSKRRRKQVPHQVEIKRDAKHKEVRIFCDAGRILRPLLVVKNLHK 628

Query: 183  IKFLKERDYSFQSLLDHXXXXXXXXXXXXNCYTAWGVKYLFHDEPLEKTSPPYTHCELDG 362
            IK LK   YSFQ LLD+            +C TAW +KYLF +   +     YTHCELD 
Sbjct: 629  IKLLKGGGYSFQDLLDNGVVELIGTEEEEDCCTAWDIKYLFLEND-DHNPGKYTHCELDM 687

Query: 363  SFLLSLSCGIIPFANHDHAKRVLFQAQKHSQQAIGHSTTNPNIRVDTIAHNLFYPQKPLF 542
            SF+L LSCGIIPFANHDHAKRVLFQ+QKHSQQAIG+S+TNP+IR DT++H LFYPQ+PLF
Sbjct: 688  SFMLGLSCGIIPFANHDHAKRVLFQSQKHSQQAIGYSSTNPDIRADTLSHQLFYPQRPLF 747

Query: 543  RTVLSDCLGAPK-YGNGQR-LQPRDEYYNGQCAIVAVNVHLGYNQEDSLVMNRASLERGM 716
            +TVLSDCL   + +G  Q+ + PR E+YNGQCAIVAVNVHLGYNQEDSLVMNRA L+RGM
Sbjct: 748  KTVLSDCLEKSQPFGQSQKGMIPRPEFYNGQCAIVAVNVHLGYNQEDSLVMNRACLDRGM 807

Query: 717  FRSEHVRSYKADIFXXXXXXXXXXXX--IIFGKIESKIGRVDNLDDDGFPYVGARLKSGD 890
            FRSEH RSYKA++               I FGKI+SKIGRVD+LDDDGFP+VGA L+SGD
Sbjct: 808  FRSEHTRSYKAEVENKEALGKKPKSDDAINFGKIQSKIGRVDSLDDDGFPFVGANLQSGD 867

Query: 891  IIIGKYAEAGGDHSIKLKHGERGSVQKVVLSANDDGKNFATVSLRQVRSPSLGDKFSSMH 1070
            I+IGK+ EAG DHS+KLKH ERG VQKVVLSAND+G NFA VSLRQVRSP LGDKFSSMH
Sbjct: 868  IVIGKFTEAGTDHSVKLKHTERGMVQKVVLSANDEGMNFAEVSLRQVRSPCLGDKFSSMH 927

Query: 1071 GQKGVLGFLESQENFPFTIQGIVPDIVINPHAFPSRQTPGQLLEAALGKGIALGGSLKYA 1250
            GQKGVLG+LESQENFPFT+QGIVPDIVINPHAFPSRQTPGQ+LE+AL KGIALGGS +YA
Sbjct: 928  GQKGVLGYLESQENFPFTVQGIVPDIVINPHAFPSRQTPGQMLESALAKGIALGGSQRYA 987

Query: 1251 TPFSTPSVEAITDQLHRCGFSRWGNERVYDGRTGEKVESLVFMGPTFYQKLVHMSEDKVK 1430
            TPFS+ SV+AITDQLHR G+SRWGNER+YDGRTGE V+SLVF+GPTFYQ+LVHMSEDKVK
Sbjct: 988  TPFSSLSVDAITDQLHRAGYSRWGNERLYDGRTGEMVKSLVFIGPTFYQRLVHMSEDKVK 1047

Query: 1431 FRNIGPVHPLTRQP 1472
            FRN GPVHPLTRQP
Sbjct: 1048 FRNTGPVHPLTRQP 1061


>gb|EOY29337.1| DNA-directed RNA polymerase isoform 2 [Theobroma cacao]
          Length = 961

 Score =  707 bits (1826), Expect = 0.0
 Identities = 358/498 (71%), Positives = 406/498 (81%), Gaps = 8/498 (1%)
 Frame = +3

Query: 3    WVGVCDDATSLVANIRSKRRSKEVHYQVEIVQDDKNREVRIFTDAGRLMRPLLVVENIKN 182
            WVGVC+D+ S  A +R KRRSKE  +QVEI +D+   EVRIF+D GR++RPLLVV+N+  
Sbjct: 357  WVGVCEDSLSFAAEVRRKRRSKEFPHQVEIKRDEHKGEVRIFSDGGRILRPLLVVDNLNR 416

Query: 183  IKFLKERDYSFQSLLDHXXXXXXXXXXXXNCYTAWGVKYLFHDEPLEKTSP-PYTHCELD 359
            IK  K  +Y+FQ+LL+             +C TAW +KYL  D  +E   P  YTHCELD
Sbjct: 417  IKAFKGENYTFQALLEGGIIELVGTEEEEDCRTAWSIKYLLTD--VEGKQPVKYTHCELD 474

Query: 360  GSFLLSLSCGIIPFANHDHAKRVLFQAQKHSQQAIGHSTTNPNIRVDTIAHNLFYPQKPL 539
             SFLL LSCGIIPFANHDHA+RVL+QAQKHSQQAIG STTNPNIRVDT++H L+YPQ+PL
Sbjct: 475  MSFLLGLSCGIIPFANHDHARRVLYQAQKHSQQAIGFSTTNPNIRVDTLSHQLYYPQRPL 534

Query: 540  FRTVLSDCLGAPKYGNGQR-LQPRDEYYNGQCAIVAVNVHLGYNQEDSLVMNRASLERGM 716
            FRT+ SDCLG   +  GQ+ + P+ E YNGQ AIVAVNVHLGYNQEDSLVMNR+SLERGM
Sbjct: 535  FRTMTSDCLGKLGHPLGQKGVLPKPELYNGQNAIVAVNVHLGYNQEDSLVMNRSSLERGM 594

Query: 717  FRSEHVRSYKADIFXXXXXXXXXXXXII--FGKIESKIGRVDNLDDDGFPYVGARLKSGD 890
            FRSEHVRSYKA++              I  FGKI+SKIGRVD+LDDDGFPYVGA L+ GD
Sbjct: 595  FRSEHVRSYKAEVDNKEIQDKRRKSEDIVNFGKIQSKIGRVDSLDDDGFPYVGANLQCGD 654

Query: 891  IIIGKYAEAGGDHSIKLKHGERGSVQKVVLSANDDGKNFATVSLRQVRSPSLGDKFSSMH 1070
            I+IG+ AE+G DHSIKLKH ERG VQKVVLS+NDDGKN+A VSLRQVRSP LGDKFSSMH
Sbjct: 655  IVIGRCAESGADHSIKLKHTERGMVQKVVLSSNDDGKNYAVVSLRQVRSPCLGDKFSSMH 714

Query: 1071 GQKGVLGFLESQENFPFTIQGIVPDIVINPHAFPSRQTPGQLLEAALGKGIALGGSLKYA 1250
            GQKGVLGFLESQENFPFT QGIVPDIVINPHAFPSRQTPGQLLEAALGKGIA GGS+KYA
Sbjct: 715  GQKGVLGFLESQENFPFTTQGIVPDIVINPHAFPSRQTPGQLLEAALGKGIACGGSMKYA 774

Query: 1251 TPFSTPSVEAITDQL----HRCGFSRWGNERVYDGRTGEKVESLVFMGPTFYQKLVHMSE 1418
            TPFST SV+AIT+QL    HR GFSRWGNERVY+GRTGE V SL+FMGPTFYQ+L+HM+E
Sbjct: 775  TPFSTISVDAITEQLHSICHRAGFSRWGNERVYNGRTGEMVRSLIFMGPTFYQRLIHMAE 834

Query: 1419 DKVKFRNIGPVHPLTRQP 1472
            DKVKFRN GPVHPLTRQP
Sbjct: 835  DKVKFRNTGPVHPLTRQP 852