BLASTX nr result

ID: Chrysanthemum22_contig00035555 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum22_contig00035555
         (718 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KVI06242.1| DDT domain-containing protein [Cynara cardunculus...    70   3e-10
ref|XP_023767732.1| homeobox-DDT domain protein RLT3 [Lactuca sa...    60   1e-06
ref|XP_021973726.1| homeobox-DDT domain protein RLT3-like isofor...    58   5e-06
ref|XP_021973725.1| homeobox-DDT domain protein RLT3-like isofor...    58   5e-06
ref|XP_021973723.1| homeobox-DDT domain protein RLT3-like isofor...    58   5e-06
ref|XP_021973722.1| homeobox-DDT domain protein RLT3-like isofor...    58   5e-06

>gb|KVI06242.1| DDT domain-containing protein [Cynara cardunculus var. scolymus]
          Length = 1108

 Score = 70.5 bits (171), Expect = 3e-10
 Identities = 34/48 (70%), Positives = 40/48 (83%)
 Frame = -1

Query: 718  SMPQTSSAVALWLVKLDFIVAPHLKRVDLETTTGTSMRTRSKGKLTLV 575
            SMPQTSSAVALWLVKLD ++APH+K+V L+ TTG S R+ SKGK  LV
Sbjct: 1060 SMPQTSSAVALWLVKLDCLIAPHIKKVGLQKTTGVSSRSTSKGKDALV 1107


>ref|XP_023767732.1| homeobox-DDT domain protein RLT3 [Lactuca sativa]
 gb|PLY82586.1| hypothetical protein LSAT_2X107580 [Lactuca sativa]
          Length = 1074

 Score = 59.7 bits (143), Expect = 1e-06
 Identities = 30/43 (69%), Positives = 34/43 (79%)
 Frame = -1

Query: 715  MPQTSSAVALWLVKLDFIVAPHLKRVDLETTTGTSMRTRSKGK 587
            MPQTSSAVALWLVKLD ++APHL+ V+ E TT    R RSKGK
Sbjct: 1028 MPQTSSAVALWLVKLDLLIAPHLQNVEAEKTT---TRNRSKGK 1067


>ref|XP_021973726.1| homeobox-DDT domain protein RLT3-like isoform X4 [Helianthus annuus]
 gb|OTG21112.1| putative DDT domain superfamily, WHIM3 domain protein [Helianthus
            annuus]
          Length = 984

 Score = 58.2 bits (139), Expect = 5e-06
 Identities = 28/44 (63%), Positives = 33/44 (75%)
 Frame = -1

Query: 718  SMPQTSSAVALWLVKLDFIVAPHLKRVDLETTTGTSMRTRSKGK 587
            S+  TSSAVALWLVKLDF++APHLK+V+L   T  S R R  GK
Sbjct: 928  SVSPTSSAVALWLVKLDFLIAPHLKKVELGKATRVSTRARLNGK 971


>ref|XP_021973725.1| homeobox-DDT domain protein RLT3-like isoform X3 [Helianthus annuus]
          Length = 994

 Score = 58.2 bits (139), Expect = 5e-06
 Identities = 28/44 (63%), Positives = 33/44 (75%)
 Frame = -1

Query: 718  SMPQTSSAVALWLVKLDFIVAPHLKRVDLETTTGTSMRTRSKGK 587
            S+  TSSAVALWLVKLDF++APHLK+V+L   T  S R R  GK
Sbjct: 938  SVSPTSSAVALWLVKLDFLIAPHLKKVELGKATRVSTRARLNGK 981


>ref|XP_021973723.1| homeobox-DDT domain protein RLT3-like isoform X2 [Helianthus annuus]
          Length = 1000

 Score = 58.2 bits (139), Expect = 5e-06
 Identities = 28/44 (63%), Positives = 33/44 (75%)
 Frame = -1

Query: 718  SMPQTSSAVALWLVKLDFIVAPHLKRVDLETTTGTSMRTRSKGK 587
            S+  TSSAVALWLVKLDF++APHLK+V+L   T  S R R  GK
Sbjct: 944  SVSPTSSAVALWLVKLDFLIAPHLKKVELGKATRVSTRARLNGK 987


>ref|XP_021973722.1| homeobox-DDT domain protein RLT3-like isoform X1 [Helianthus annuus]
          Length = 1010

 Score = 58.2 bits (139), Expect = 5e-06
 Identities = 28/44 (63%), Positives = 33/44 (75%)
 Frame = -1

Query: 718  SMPQTSSAVALWLVKLDFIVAPHLKRVDLETTTGTSMRTRSKGK 587
            S+  TSSAVALWLVKLDF++APHLK+V+L   T  S R R  GK
Sbjct: 954  SVSPTSSAVALWLVKLDFLIAPHLKKVELGKATRVSTRARLNGK 997


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