BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum22_contig00035482
         (865 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_023749966.1| uncharacterized protein LOC111898272 [Lactuc...   315   e-99 
dbj|BAF22809.1| Os08g0125300 [Oryza sativa Japonica Group] >gi|2...   292   1e-86
gb|EEC84282.1| hypothetical protein OsI_30754 [Oryza sativa Indi...   292   1e-86
gb|AAN65018.1| putative polyprotein [Oryza sativa Japonica Group...   285   3e-84
gb|ABF94034.1| retrotransposon protein, putative, unclassified [...   281   8e-83
gb|OTG20763.1| putative ribonuclease H-like domain, Reverse tran...   273   2e-81
gb|AAO72413.1| gag-pol polyprotein [Oryza sativa Japonica Group]...   276   3e-81
gb|OTG16582.1| putative zinc finger, CCHC-type [Helianthus annuus]    275   2e-80
gb|AAC95173.1| putative retroelement pol polyprotein [Arabidopsi...   273   2e-80
emb|CAE04422.2| OSJNBb0040D15.12 [Oryza sativa Japonica Group]        266   3e-79
gb|ABB47537.2| retrotransposon protein, putative, unclassified [...   268   2e-78
gb|AAF97299.1|AC007843_2 Similar to copia-type reverse transcrip...   261   2e-77
gb|ABH07409.1| putative pol polyprotein [Brassica oleracea var. ...   263   2e-76
gb|AAF79483.1|AC022492_27 F1L3.20 [Arabidopsis thaliana]              261   7e-76
gb|KYP39371.1| Retrovirus-related Pol polyprotein from transposo...   242   2e-74
gb|KYP35823.1| Retrovirus-related Pol polyprotein from transposo...   246   4e-73
gb|KZV32174.1| retrovirus-related Pol polyprotein from transposo...   246   4e-73
gb|KYP35826.1| Retrovirus-related Pol polyprotein from transposo...   242   5e-73
dbj|BAG94704.1| unnamed protein product [Oryza sativa Japonica G...   250   3e-72
gb|AAG60200.1|AC084763_20 putative gag-pol polyprotein [Oryza sa...   251   3e-72

>ref|XP_023749966.1| uncharacterized protein LOC111898272 [Lactuca sativa]
          Length = 652

 Score =  315 bits (806), Expect = e-99
 Identities = 146/247 (59%), Positives = 185/247 (74%)
 Frame = +3

Query: 3    PTPAGNRYFFLLVDDFSRVMWVYFLKSKDEALGMFQKFRVLVENETGVKVKTLRTDRGGE 182
            PTPAGNRYF L+VDD SRVMWV+ +K+KDE    F+ FRV VE ETG K+K LRTDRGGE
Sbjct: 397  PTPAGNRYFMLIVDDSSRVMWVFLMKTKDETFQTFKNFRVKVETETGEKLKVLRTDRGGE 456

Query: 183  FNLKAFTEYCENTGLKHHFTAPYSPQQNGVVERRNRSVIEMARSMMKSMEVPDTLWAEAV 362
            F    FT YC  TGL+ H+T+PYSPQQNGVVERRNR+V+EM R  +K+MEVPD LW EAV
Sbjct: 457  FLSNDFTRYCNETGLQRHYTSPYSPQQNGVVERRNRTVLEMVRCNLKTMEVPDVLWGEAV 516

Query: 363  RQAVYIQNRVPTKTLGDTTPYERWSGKKPNLEHLRVFGCIAHSKVLRGHQQKLDSRSEML 542
              +VYI NRV TK L + TPYE+W+G+KP+++HLR+FGC+AH KV +G  +KL+ RS  L
Sbjct: 517  THSVYILNRVHTKALKNATPYEKWTGRKPHVDHLRIFGCVAHMKVAKGQLKKLEDRSIKL 576

Query: 543  VHLGTETGSKAYRLLDPVSGRIRVSRDVRFEEGKPWLWDETTKFKENPRSTFTIKGYNQE 722
            VHLG E G+KAYRLLDP  G++ VSRDV FEE + W W+ +TK K     +F ++G++  
Sbjct: 577  VHLGVEKGTKAYRLLDPNKGKMYVSRDVVFEEKRKWDWETSTKIKATTGMSFIVEGFDFN 636

Query: 723  DTNLEDE 743
                ++E
Sbjct: 637  GDGYDEE 643


>dbj|BAF22809.1| Os08g0125300 [Oryza sativa Japonica Group]
 dbj|BAG92574.1| unnamed protein product [Oryza sativa Japonica Group]
 dbj|BAT03649.1| Os08g0125300 [Oryza sativa Japonica Group]
          Length = 1427

 Score =  292 bits (748), Expect = 1e-86
 Identities = 150/286 (52%), Positives = 185/286 (64%)
 Frame = +3

Query: 6    TPAGNRYFFLLVDDFSRVMWVYFLKSKDEALGMFQKFRVLVENETGVKVKTLRTDRGGEF 185
            T AGNRYF L+VDDFSR MW++ +K+KD+AL  F KF+ L EN  G ++KTLR+DRGGEF
Sbjct: 569  TMAGNRYFMLIVDDFSRWMWMFVIKTKDQALEAFTKFKPLAENTAGRRIKTLRSDRGGEF 628

Query: 186  NLKAFTEYCENTGLKHHFTAPYSPQQNGVVERRNRSVIEMARSMMKSMEVPDTLWAEAVR 365
                F + CE  G++ H TAPYSPQQNGVVERRNRSV+ MARS+MK M VP   W EAVR
Sbjct: 629  LSGEFAQLCEQAGIQRHLTAPYSPQQNGVVERRNRSVMAMARSLMKGMSVPGRFWGEAVR 688

Query: 366  QAVYIQNRVPTKTLGDTTPYERWSGKKPNLEHLRVFGCIAHSKVLRGHQQKLDSRSEMLV 545
             AVY+ NR+PTK +GD TP+E W+G+KP L HLRVFGCIAH+K+   +Q+KLD RS   V
Sbjct: 689  HAVYLLNRLPTKAMGDRTPFEAWTGRKPQLGHLRVFGCIAHAKITTPNQKKLDDRSAPYV 748

Query: 546  HLGTETGSKAYRLLDPVSGRIRVSRDVRFEEGKPWLWDETTKFKENPRSTFTIKGYNQED 725
            +LG E GSKA+RL DP  GRI VSRDV FEE  PW W       E   + FT+       
Sbjct: 749  YLGVEEGSKAHRLFDPRCGRIHVSRDVIFEENVPWQWSVVA--GEQNSTEFTV------- 799

Query: 726  TNLEDENGLTGEPLGSLEGINDEEFQPTPQTHAHGDEGFSTPSQSP 863
                +E+G+   P G+          P P+  A       +P  SP
Sbjct: 800  ----EEDGVDAPPAGA-------PAYPVPRYRAPSPAVPQSPPASP 834


>gb|EEC84282.1| hypothetical protein OsI_30754 [Oryza sativa Indica Group]
          Length = 1427

 Score =  292 bits (747), Expect = 1e-86
 Identities = 144/256 (56%), Positives = 177/256 (69%)
 Frame = +3

Query: 6    TPAGNRYFFLLVDDFSRVMWVYFLKSKDEALGMFQKFRVLVENETGVKVKTLRTDRGGEF 185
            T AGNRYF L+VDDFSR MW++ +K+KD+AL  F KF+ L EN  G ++KTLR+DRGGEF
Sbjct: 569  TMAGNRYFMLIVDDFSRWMWMFVIKTKDQALEAFTKFKPLAENTAGRRIKTLRSDRGGEF 628

Query: 186  NLKAFTEYCENTGLKHHFTAPYSPQQNGVVERRNRSVIEMARSMMKSMEVPDTLWAEAVR 365
                F + CE  G++ H TAPYSPQQNGVVERRNRSV+ MARS+MK M VP   W EAVR
Sbjct: 629  LSGEFAQLCEQAGIQRHLTAPYSPQQNGVVERRNRSVMAMARSLMKGMSVPGRFWGEAVR 688

Query: 366  QAVYIQNRVPTKTLGDTTPYERWSGKKPNLEHLRVFGCIAHSKVLRGHQQKLDSRSEMLV 545
             AVY+ NR+PTK +GD TP+E W+G+KP L HLRVFGCIAH+K+   +Q+KLD RS   V
Sbjct: 689  HAVYLLNRLPTKAMGDRTPFEAWTGRKPQLGHLRVFGCIAHAKITTPNQKKLDDRSAPYV 748

Query: 546  HLGTETGSKAYRLLDPVSGRIRVSRDVRFEEGKPWLWDETTKFKENPRSTFTIKGYNQED 725
            +LG E GSKA+RL DP  GRI VSRDV FEE  PW W       E   + FT+       
Sbjct: 749  YLGVEEGSKAHRLFDPRCGRIHVSRDVIFEENVPWQWSVVA--GEQNSTEFTV------- 799

Query: 726  TNLEDENGLTGEPLGS 773
                +E+G+   P G+
Sbjct: 800  ----EEDGVDAPPAGA 811


>gb|AAN65018.1| putative polyprotein [Oryza sativa Japonica Group]
 gb|ABF99139.1| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1394

 Score =  285 bits (729), Expect = 3e-84
 Identities = 135/217 (62%), Positives = 164/217 (75%)
 Frame = +3

Query: 6    TPAGNRYFFLLVDDFSRVMWVYFLKSKDEALGMFQKFRVLVENETGVKVKTLRTDRGGEF 185
            T AGN+YF L+VDDF+R MWV+ +KSKD+A+  F KF+ L EN  G ++KTLR+DRGG+F
Sbjct: 484  TMAGNKYFVLIVDDFTRWMWVFVIKSKDQAVEAFTKFKPLAENVAGRRIKTLRSDRGGKF 543

Query: 186  NLKAFTEYCENTGLKHHFTAPYSPQQNGVVERRNRSVIEMARSMMKSMEVPDTLWAEAVR 365
                F + CE+ G++ H TAPYSPQQNGVVERRNRSV+ MARS++K M VP  LW EAVR
Sbjct: 544  LSGEFAQVCESAGIQRHLTAPYSPQQNGVVERRNRSVMVMARSLLKGMSVPGRLWGEAVR 603

Query: 366  QAVYIQNRVPTKTLGDTTPYERWSGKKPNLEHLRVFGCIAHSKVLRGHQQKLDSRSEMLV 545
             AVYI NR+PTK +G+ TPYE W+GKKP+L HLRVFGC AH+K+   H +KLD RS   V
Sbjct: 604  HAVYILNRLPTKAMGNRTPYEAWTGKKPHLAHLRVFGCTAHAKITTPHLKKLDDRSAPYV 663

Query: 546  HLGTETGSKAYRLLDPVSGRIRVSRDVRFEEGKPWLW 656
            +LG E GSKA+RL DP  GRI VSRDV FEE   W W
Sbjct: 664  YLGVEEGSKAHRLFDPRRGRIHVSRDVIFEENAVWQW 700


>gb|ABF94034.1| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1409

 Score =  281 bits (719), Expect = 8e-83
 Identities = 132/217 (60%), Positives = 163/217 (75%)
 Frame = +3

Query: 6    TPAGNRYFFLLVDDFSRVMWVYFLKSKDEALGMFQKFRVLVENETGVKVKTLRTDRGGEF 185
            T +GNRYFFL+VDD+SR +WV+ LK+KD++L  F KF+ L EN  G +VKTLR+DRGGEF
Sbjct: 547  TMSGNRYFFLIVDDYSRWIWVFVLKTKDQSLDAFVKFKPLAENTAGRRVKTLRSDRGGEF 606

Query: 186  NLKAFTEYCENTGLKHHFTAPYSPQQNGVVERRNRSVIEMARSMMKSMEVPDTLWAEAVR 365
                F + CE  G++ H TAPYSPQQNGVVERRNR+V+ MARS++K M VP   W EAVR
Sbjct: 607  LSGEFAQVCEEAGIQRHLTAPYSPQQNGVVERRNRTVMAMARSLLKGMRVPGRFWGEAVR 666

Query: 366  QAVYIQNRVPTKTLGDTTPYERWSGKKPNLEHLRVFGCIAHSKVLRGHQQKLDSRSEMLV 545
             AV++ NR+PTK +GD TP+E W+G+KP L HL+VFGC AH+K  + H +KLD RS   V
Sbjct: 667  HAVHLLNRLPTKAMGDRTPFEAWTGRKPQLGHLKVFGCTAHAKNTQPHLKKLDDRSAPYV 726

Query: 546  HLGTETGSKAYRLLDPVSGRIRVSRDVRFEEGKPWLW 656
            +LG E GSKA+RL DP  GRI VSRDV FEE  PW W
Sbjct: 727  YLGVEEGSKAHRLFDPRRGRIHVSRDVVFEENVPWEW 763


>gb|OTG20763.1| putative ribonuclease H-like domain, Reverse transcriptase,
           RNA-dependent DNA polymerase [Helianthus annuus]
          Length = 920

 Score =  273 bits (698), Expect = 2e-81
 Identities = 133/254 (52%), Positives = 170/254 (66%)
 Frame = +3

Query: 3   PTPAGNRYFFLLVDDFSRVMWVYFLKSKDEALGMFQKFRVLVENETGVKVKTLRTDRGGE 182
           PT AG +Y FLLVDD +R MW Y L SKD+A   F++F+  VE E   K+K LRTDRGGE
Sbjct: 59  PTHAGKKYIFLLVDDCTRYMWAYLLTSKDQAFETFKEFKEKVEKEAQTKLKMLRTDRGGE 118

Query: 183 FNLKAFTEYCENTGLKHHFTAPYSPQQNGVVERRNRSVIEMARSMMKSMEVPDTLWAEAV 362
           F    F +YC+  G+    TAPYSPQQNGVVERRNR+++   RSM+K+M +P   W EAV
Sbjct: 119 FTSAEFNKYCKTNGIARQLTAPYSPQQNGVVERRNRTMLSTTRSMLKAMNMPQNFWGEAV 178

Query: 363 RQAVYIQNRVPTKTLGDTTPYERWSGKKPNLEHLRVFGCIAHSKVLRGHQQKLDSRSEML 542
           R A+Y+ NRVPTK L + TP+E   G+KPNLEHL+VFGC A++KVL   Q+KLD RS  +
Sbjct: 179 RHAIYVLNRVPTKALVNKTPFEALKGRKPNLEHLKVFGCTAYAKVLPLQQKKLDDRSAPM 238

Query: 543 VHLGTETGSKAYRLLDPVSGRIRVSRDVRFEEGKPWLWDETTKFKENPRSTFTIKGYNQE 722
           V+LG E GSKAYRL DP   +I VSRDV+F EG+PW WD   +  ++    +T    +++
Sbjct: 239 VYLGIEEGSKAYRLYDPAKNKICVSRDVKFMEGQPWNWDSYMETVDSGNPEWTNFVIHED 298

Query: 723 DTNLEDENGLTGEP 764
           D   E E      P
Sbjct: 299 DLPPELEENEPSSP 312


>gb|AAO72413.1| gag-pol polyprotein [Oryza sativa Japonica Group]
 gb|ABF98178.1| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1339

 Score =  276 bits (707), Expect = 3e-81
 Identities = 130/217 (59%), Positives = 160/217 (73%)
 Frame = +3

Query: 6    TPAGNRYFFLLVDDFSRVMWVYFLKSKDEALGMFQKFRVLVENETGVKVKTLRTDRGGEF 185
            T  GNRYF L+VDDFS  MWV+ +KSKD+AL  F+KF+ L EN  G  +KTLRTDRGGEF
Sbjct: 522  TFTGNRYFMLIVDDFSHWMWVFVIKSKDQALAAFEKFKPLAENTAGRTIKTLRTDRGGEF 581

Query: 186  NLKAFTEYCENTGLKHHFTAPYSPQQNGVVERRNRSVIEMARSMMKSMEVPDTLWAEAVR 365
                F   C+  G++ H T PYSPQQNGVVERRNR+V+ MARS++K M VP  +W EAVR
Sbjct: 582  LSGEFARVCDAAGIERHLTVPYSPQQNGVVERRNRTVMAMARSLLKGMSVPGRMWGEAVR 641

Query: 366  QAVYIQNRVPTKTLGDTTPYERWSGKKPNLEHLRVFGCIAHSKVLRGHQQKLDSRSEMLV 545
             AV++ NR+PTK +G+ TP+E W+GKKP+L HLRVFGC AH+KV   H +KLD RS  +V
Sbjct: 642  HAVFLLNRLPTKAMGNRTPFEAWTGKKPHLGHLRVFGCTAHAKVTAPHLKKLDDRSNPVV 701

Query: 546  HLGTETGSKAYRLLDPVSGRIRVSRDVRFEEGKPWLW 656
            +LG E GSKA+RL DP   +I VSRDV F+E  PW W
Sbjct: 702  YLGVEEGSKAHRLFDPRRRQIIVSRDVVFDENTPWQW 738


>gb|OTG16582.1| putative zinc finger, CCHC-type [Helianthus annuus]
          Length = 1427

 Score =  275 bits (702), Expect = 2e-80
 Identities = 142/286 (49%), Positives = 184/286 (64%), Gaps = 4/286 (1%)
 Frame = +3

Query: 6    TPAGNRYFFLLVDDFSRVMWVYFLKSKDEALGMFQKFRVLVENETGVKVKTLRTDRGGEF 185
            T  GNRYF L+VDDFSR MWVY LK+K+EA   F+ F+  VE E+  K+K LRTDRGGEF
Sbjct: 570  TWGGNRYFLLIVDDFSRYMWVYLLKTKNEAFEKFKIFKTRVEKESKYKIKMLRTDRGGEF 629

Query: 186  NLKAFTEYCENTGLKHHFTAPYSPQQNGVVERRNRSVIEMARSMMKSMEVPDTLWAEAVR 365
            N + F ++C  TG+K   TAPY+PQQNGVVERRNR+V+ M RSM+KSM VP+ LW EAVR
Sbjct: 630  NSQVFIDFCNETGIKRQTTAPYTPQQNGVVERRNRTVLGMTRSMLKSMNVPEPLWGEAVR 689

Query: 366  QAVYIQNRVPTKTLGDTTPYERWSGKKPNLEHLRVFGCIAHSKVLRGHQQKLDSRSEMLV 545
             AVY+ NR+ TK + + TPYE W  KKPNL++L+VFGC+ ++  L G   KL+ RS+ L+
Sbjct: 690  HAVYLLNRIVTKAVKNKTPYEAWKKKKPNLKYLKVFGCVGYAMKLTGRFHKLEDRSQPLI 749

Query: 546  HLGTETGSKAYRLLDPVSGRIRVSRDVRFEEGKPWLWDETTKFKENPRSTFTIKGYNQE- 722
            +LG E GSKAYRL +P   RI VSRDV F E K W+W +  +    P +  +++  N E 
Sbjct: 750  YLGREPGSKAYRLFNPTEKRIVVSRDVSFYEKKAWVW-QKVQVNNAPSTWTSVQAGNMEH 808

Query: 723  -DTNLEDENGLTGEPL--GSLEGINDEEFQPTPQTHAHGDEGFSTP 851
             D   ED   +   P        I+D    P      H + G +TP
Sbjct: 809  GDNACEDAERVPPTPTFNNMTSPIHDNACTP------HANSGKNTP 848


>gb|AAC95173.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1200

 Score =  273 bits (699), Expect = 2e-80
 Identities = 144/286 (50%), Positives = 184/286 (64%), Gaps = 2/286 (0%)
 Frame = +3

Query: 3    PTPAGNRYFFLLVDDFSRVMWVYFLKSKDEALGMFQKFRVLVENETGVKVKTLRTDRGGE 182
            PT A  RY  +L+DD SR MW + LK K EA G F+ F+  VE ETG K+KTLRTDRGGE
Sbjct: 463  PTAAKRRYILVLIDDHSRFMWSFLLKEKSEAFGKFKTFKATVEQETGEKIKTLRTDRGGE 522

Query: 183  FNLKAFTEYCENTGLKHHFTAPYSPQQNGVVERRNRSVIEMARSMMKSMEVPDTLWAEAV 362
            F  + F  +CE  G+  H TAPY+PQQNGVVERRNR+++ M RS+MK M VP+ LW EA+
Sbjct: 523  FLSQEFQTFCEEEGIIRHLTAPYTPQQNGVVERRNRTLLGMTRSIMKHMSVPNYLWGEAI 582

Query: 363  RQAVYIQNRVPTKTLGDTTPYERWSGKKPNLEHLRVFGCIAHSKVLRGHQQKLDSRSEML 542
            R A Y+ NRV T+ L + TPYE    KKPN+EHLRVFGC++++KV   H +KLD RS +L
Sbjct: 583  RHATYLINRVGTRALINQTPYEALKKKKPNVEHLRVFGCVSYAKVEFPHLRKLDERSRIL 642

Query: 543  VHLGTETGSKAYRLLDPVSGRIRVSRDVRFEEGKPWLW--DETTKFKENPRSTFTIKGYN 716
            V+LGTETGSKAY LLDP + +I VSRDV F+E K W W   E  + ++ P   FT+    
Sbjct: 643  VYLGTETGSKAYTLLDPTTRKIIVSRDVVFDENKSWKWANSELIEIQKEP-GMFTLA--Q 699

Query: 717  QEDTNLEDENGLTGEPLGSLEGINDEEFQPTPQTHAHGDEGFSTPS 854
             E  N E+    T E +        EE +    T+   ++G   PS
Sbjct: 700  TEFHNNEEVENETSEEI--------EENEAEDSTNKDAEDGLDEPS 737


>emb|CAE04422.2| OSJNBb0040D15.12 [Oryza sativa Japonica Group]
          Length = 893

 Score =  266 bits (681), Expect = 3e-79
 Identities = 128/217 (58%), Positives = 155/217 (71%)
 Frame = +3

Query: 6    TPAGNRYFFLLVDDFSRVMWVYFLKSKDEALGMFQKFRVLVENETGVKVKTLRTDRGGEF 185
            T AGNRYF L+VDDFSR MWV+ +KSKD+AL   +KF+ L EN  G  +KTLRTDRG EF
Sbjct: 382  TFAGNRYFMLIVDDFSRWMWVFVIKSKDQALAASEKFKPLAENTAGRTIKTLRTDRGSEF 441

Query: 186  NLKAFTEYCENTGLKHHFTAPYSPQQNGVVERRNRSVIEMARSMMKSMEVPDTLWAEAVR 365
                F   C+  G++ H TAPYSPQQNGVVE RNR+V+ MARS++K M VP  +W EAVR
Sbjct: 442  LSGEFARVCDAAGIERHLTAPYSPQQNGVVEHRNRTVMAMARSLLKGMSVPGRMWGEAVR 501

Query: 366  QAVYIQNRVPTKTLGDTTPYERWSGKKPNLEHLRVFGCIAHSKVLRGHQQKLDSRSEMLV 545
             AV++ NR+PTK +G+ T +E W GKKP+L HL VFGC AH+KV   H  KLD RS   V
Sbjct: 502  HAVFLLNRLPTKAMGNRTSFEAWMGKKPHLGHLWVFGCTAHTKVTAPHLMKLDDRSNPFV 561

Query: 546  HLGTETGSKAYRLLDPVSGRIRVSRDVRFEEGKPWLW 656
            +LG E GSKA+RL DP   +I VSRDV F+E  PW W
Sbjct: 562  YLGVEEGSKAHRLFDPRRRQIIVSRDVVFDENTPWQW 598


>gb|ABB47537.2| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1172

 Score =  268 bits (684), Expect = 2e-78
 Identities = 126/217 (58%), Positives = 158/217 (72%)
 Frame = +3

Query: 6    TPAGNRYFFLLVDDFSRVMWVYFLKSKDEALGMFQKFRVLVENETGVKVKTLRTDRGGEF 185
            T AGNRYF L+VDDFS  MWV+ +K KD+AL +F+KF+ L +N  G  +KTLRTDRGGEF
Sbjct: 416  TFAGNRYFMLIVDDFSNWMWVFVIKLKDQALAVFEKFKPLAKNTVGRTIKTLRTDRGGEF 475

Query: 186  NLKAFTEYCENTGLKHHFTAPYSPQQNGVVERRNRSVIEMARSMMKSMEVPDTLWAEAVR 365
                F   C+   ++ H TAPYSPQQN VVERRNR+V+ MARS++K M VP  +W EAVR
Sbjct: 476  LSGKFARVCDAASIERHLTAPYSPQQNDVVERRNRTVMAMARSLLKGMSVPGRMWGEAVR 535

Query: 366  QAVYIQNRVPTKTLGDTTPYERWSGKKPNLEHLRVFGCIAHSKVLRGHQQKLDSRSEMLV 545
             A+++ N +PTK +G+ TP+E W+GKKP+L HLRVFGC AH+KV   H +KLD RS   V
Sbjct: 536  HAIFLLNWLPTKAMGNRTPFEAWTGKKPHLGHLRVFGCTAHAKVTAPHLKKLDDRSNPFV 595

Query: 546  HLGTETGSKAYRLLDPVSGRIRVSRDVRFEEGKPWLW 656
            +LG E GSKA+RL DP   +I VSRDV F+E  PW W
Sbjct: 596  YLGVEEGSKAHRLFDPRRRQIIVSRDVVFDENTPWQW 632


>gb|AAF97299.1|AC007843_2 Similar to copia-type reverse transcriptase proteins [Arabidopsis
           thaliana]
          Length = 833

 Score =  261 bits (666), Expect = 2e-77
 Identities = 125/258 (48%), Positives = 174/258 (67%)
 Frame = +3

Query: 6   TPAGNRYFFLLVDDFSRVMWVYFLKSKDEALGMFQKFRVLVENETGVKVKTLRTDRGGEF 185
           T AGN+Y F L+DDF R MW   LK K +A   F  F+ LVE E+  +V+T RTDRGGEF
Sbjct: 71  TKAGNKYIFALIDDFFRYMWTILLKEKADAFQKFCNFKSLVEKESSTRVQTFRTDRGGEF 130

Query: 186 NLKAFTEYCENTGLKHHFTAPYSPQQNGVVERRNRSVIEMARSMMKSMEVPDTLWAEAVR 365
               F  +CE +G+  H TAPY+PQQNGVVERRNR+++EM RS++K M +P+ LW EA+R
Sbjct: 131 VSHEFNSFCEKSGITRHLTAPYTPQQNGVVERRNRTMMEMTRSILKHMHLPNYLWGEAIR 190

Query: 366 QAVYIQNRVPTKTLGDTTPYERWSGKKPNLEHLRVFGCIAHSKVLRGHQQKLDSRSEMLV 545
              Y+ NR+ T++L D TPYE +  ++P +EH+R+FGCIA++K+ +   +KLD RS +L+
Sbjct: 191 HTTYLLNRIITRSLKDKTPYECFRDRRPTVEHIRIFGCIAYAKIDKQQLRKLDDRSRILI 250

Query: 546 HLGTETGSKAYRLLDPVSGRIRVSRDVRFEEGKPWLWDETTKFKENPRSTFTIKGYNQED 725
           HLGTE GSKAYRL DP + ++ VSRDV F+EGK W W  +   K+   S F I  +N  +
Sbjct: 251 HLGTEPGSKAYRLFDPQTQKVVVSRDVVFDEGKGWDWKYSNTGKDGDGS-FDITFHNFGN 309

Query: 726 TNLEDENGLTGEPLGSLE 779
             L+D   ++     ++E
Sbjct: 310 HGLQDYEEISQSEHANIE 327


>gb|ABH07409.1| putative pol polyprotein [Brassica oleracea var. botrytis]
          Length = 1239

 Score =  263 bits (671), Expect = 2e-76
 Identities = 124/231 (53%), Positives = 163/231 (70%)
 Frame = +3

Query: 6    TPAGNRYFFLLVDDFSRVMWVYFLKSKDEALGMFQKFRVLVENETGVKVKTLRTDRGGEF 185
            T A NRY F+++DD +R MW   LK K E    F+ F+ LVE E    + TLRTDRGGEF
Sbjct: 408  TLAQNRYIFVIIDDNTRYMWSILLKEKSEVFEKFKTFKALVEKEVNKVIVTLRTDRGGEF 467

Query: 186  NLKAFTEYCENTGLKHHFTAPYSPQQNGVVERRNRSVIEMARSMMKSMEVPDTLWAEAVR 365
              + F +YC N G++ H TAPY+PQQNGVVERRNR+++EM RSM+K+M VP+ +W EAVR
Sbjct: 468  TSRDFQDYCNNNGIRRHLTAPYTPQQNGVVERRNRTLMEMTRSMLKAMNVPNYMWGEAVR 527

Query: 366  QAVYIQNRVPTKTLGDTTPYERWSGKKPNLEHLRVFGCIAHSKVLRGHQQKLDSRSEMLV 545
             A Y+ NRVPT+ L + TPYE + G+KP++ H+RVFGC+A++K+     +KLD RS+ LV
Sbjct: 528  HATYLINRVPTRALKNQTPYESFKGRKPSIGHIRVFGCLAYAKLDAALLKKLDDRSQTLV 587

Query: 546  HLGTETGSKAYRLLDPVSGRIRVSRDVRFEEGKPWLWDETTKFKENPRSTF 698
            HLG E GSKAYRL +P + RI VSRDV+F+E   W W+ET K  +     F
Sbjct: 588  HLGIEPGSKAYRLYNPSTRRIVVSRDVKFDEKACWNWNETDKGNQEESGKF 638


>gb|AAF79483.1|AC022492_27 F1L3.20 [Arabidopsis thaliana]
          Length = 1188

 Score =  261 bits (666), Expect = 7e-76
 Identities = 125/258 (48%), Positives = 174/258 (67%)
 Frame = +3

Query: 6    TPAGNRYFFLLVDDFSRVMWVYFLKSKDEALGMFQKFRVLVENETGVKVKTLRTDRGGEF 185
            T AGN+Y F L+DDF R MW   LK K +A   F  F+ LVE E+  +V+T RTDRGGEF
Sbjct: 453  TKAGNKYIFALIDDFFRYMWTILLKEKADAFQKFCNFKSLVEKESSTRVQTFRTDRGGEF 512

Query: 186  NLKAFTEYCENTGLKHHFTAPYSPQQNGVVERRNRSVIEMARSMMKSMEVPDTLWAEAVR 365
                F  +CE +G+  H TAPY+PQQNGVVERRNR+++EM RS++K M +P+ LW EA+R
Sbjct: 513  VSHEFNSFCEKSGITRHLTAPYTPQQNGVVERRNRTMMEMTRSILKHMHLPNYLWGEAIR 572

Query: 366  QAVYIQNRVPTKTLGDTTPYERWSGKKPNLEHLRVFGCIAHSKVLRGHQQKLDSRSEMLV 545
               Y+ NR+ T++L D TPYE +  ++P +EH+R+FGCIA++K+ +   +KLD RS +L+
Sbjct: 573  HTTYLLNRIITRSLKDKTPYECFRDRRPTVEHIRIFGCIAYAKIDKQQLRKLDDRSRILI 632

Query: 546  HLGTETGSKAYRLLDPVSGRIRVSRDVRFEEGKPWLWDETTKFKENPRSTFTIKGYNQED 725
            HLGTE GSKAYRL DP + ++ VSRDV F+EGK W W  +   K+   S F I  +N  +
Sbjct: 633  HLGTEPGSKAYRLFDPQTQKVVVSRDVVFDEGKGWDWKYSNTGKDGDGS-FDITFHNFGN 691

Query: 726  TNLEDENGLTGEPLGSLE 779
              L+D   ++     ++E
Sbjct: 692  HGLQDYEEISQSEHANIE 709


>gb|KYP39371.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 407

 Score =  242 bits (618), Expect = 2e-74
 Identities = 119/246 (48%), Positives = 159/246 (64%), Gaps = 4/246 (1%)
 Frame = +3

Query: 12  AGNRYFFLLVDDFSRVMWVYFLKSKDEALGMFQKFRVLVENETGVKVKTLRTDRGGEFNL 191
           +G +YF   +DDFSR  WVYFLK K E    F+KF+V+VE E    VK +R+DRGGEF  
Sbjct: 106 SGKKYFVSFIDDFSRKTWVYFLKEKLEVFETFKKFKVMVEKEMSTFVKAVRSDRGGEFTS 165

Query: 192 KAFTEYCENTGLKHHFTAPYSPQQNGVVERRNRSVIEMARSMMKSMEVPDTLWAEAVRQA 371
             F +YCE  G+K   TAPYSPQQNGV ER+NR++++M RSM+K   +P   WAEAV+ A
Sbjct: 166 VEFNKYCEEHGIKRFLTAPYSPQQNGVAERKNRTILDMVRSMLKGKNMPKKFWAEAVQCA 225

Query: 372 VYIQNRVPTKTLGDTTPYERWSGKKPNLEHLRVFGCIAHSKVLRGHQQKLDSRSEMLVHL 551
           VY+QNR P   LG+ TP E WSG KP++ HLRVFG +A+ +V R  + KL+ RS+  + +
Sbjct: 226 VYVQNRCPHAKLGEKTPQEIWSGMKPSVSHLRVFGSLAYGQVPRQQRTKLEDRSKKYIFI 285

Query: 552 GTETGSKAYRLLDPVSGRIRVSRDVRFEEGKPWLW----DETTKFKENPRSTFTIKGYNQ 719
           G +  SKAY+L DP + ++ VSRDV  EE K W W    +E T       ST T    + 
Sbjct: 286 GYDEKSKAYKLFDPDNKKVVVSRDVHVEETKQWCWSNSAEEETSSNIVVPSTITTTELSD 345

Query: 720 EDTNLE 737
           E++ L+
Sbjct: 346 EESELQ 351


>gb|KYP35823.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 677

 Score =  246 bits (628), Expect = 4e-73
 Identities = 120/251 (47%), Positives = 163/251 (64%), Gaps = 4/251 (1%)
 Frame = +3

Query: 12   AGNRYFFLLVDDFSRVMWVYFLKSKDEALGMFQKFRVLVENETGVKVKTLRTDRGGEFNL 191
            +G +YF   +DDFSR  WVYFLK K E    F+KF+V+VE ET   +K +R+DRGGEF  
Sbjct: 406  SGKKYFVSFIDDFSRKTWVYFLKEKLEVFETFKKFKVMVEKETSKFIKAVRSDRGGEFTS 465

Query: 192  KAFTEYCENTGLKHHFTAPYSPQQNGVVERRNRSVIEMARSMMKSMEVPDTLWAEAVRQA 371
              F +YCE  G+K   TAPYSPQQNGV ER+NR++++M RSM+K   +P   WAEAV+ A
Sbjct: 466  VEFNKYCEEHGIKRFLTAPYSPQQNGVAERKNRTILDMVRSMLKGKNMPKKFWAEAVQCA 525

Query: 372  VYIQNRVPTKTLGDTTPYERWSGKKPNLEHLRVFGCIAHSKVLRGHQQKLDSRSEMLVHL 551
            VY+QNR P   LG+ TP E WSG KP++ HLRVFG +A+ +V R H+ KL+ RS+  + +
Sbjct: 526  VYVQNRCPHAKLGEKTPQEIWSGMKPSVSHLRVFGSLAYGQVPRQHRTKLEDRSKKYIFI 585

Query: 552  GTETGSKAYRLLDPVSGRIRVSRDVRFEEGKPWLWDETTKFKENP----RSTFTIKGYNQ 719
            G +  SKAY+L DP + ++ VSRDV  EE K W W  + + + +      ST T+  +  
Sbjct: 586  GYDEKSKAYKLYDPDNKKVVVSRDVHVEETKQWCWSNSIEVETSSDIVVPSTTTMTEFFD 645

Query: 720  EDTNLEDENGL 752
            E + L    GL
Sbjct: 646  EGSELHTLEGL 656


>gb|KZV32174.1| retrovirus-related Pol polyprotein from transposon TNT 1-94
            [Dorcoceras hygrometricum]
          Length = 699

 Score =  246 bits (629), Expect = 4e-73
 Identities = 125/275 (45%), Positives = 168/275 (61%), Gaps = 3/275 (1%)
 Frame = +3

Query: 6    TPAGNRYFFLLVDDFSRVMWVYFLKSKDEALGMFQKFRVLVENETGVKVKTLRTDRGGEF 185
            T  G++YF L VDD+SR+ WVYFLK K EA G F KF+ LVE + G  +K LRTDRGGEF
Sbjct: 364  TLGGSKYFLLFVDDYSRMSWVYFLKFKSEAFGQFFKFKALVEKQKGSNLKILRTDRGGEF 423

Query: 186  NLKAFTEYCENTGLKHHFTAPYSPQQNGVVERRNRSVIEMARSMMKSMEVPDTLWAEAVR 365
                F +YCE  G+    TAPY+P+QNGV ER+NR+++EMARSM+KS  +P   WAEAV 
Sbjct: 424  TSMEFNQYCEKHGIHKELTAPYTPEQNGVAERKNRTIVEMARSMLKSKGLPYNFWAEAVT 483

Query: 366  QAVYIQNRVPTKTLGDTTPYERWSGKKPNLEHLRVFGCIAHSKVLRGHQQKLDSRSEMLV 545
             AVY+ N  PTK + + TPYE WSGK+P++EHL++FGCI +  +    + KL+ +S   +
Sbjct: 484  TAVYLINLSPTKAVMNKTPYEAWSGKRPSVEHLKIFGCIVYVLINANERHKLEEKSIKCI 543

Query: 546  HLGTETGSKAYRLLDPVSGRIRVSRDVRFEEGKPWLWDETTKFKENPRSTFTIKGYNQED 725
             +G  + SKAYR+ +P +G++ VSR+  F E   W W++  K             +  ED
Sbjct: 544  FIGYCSQSKAYRVYNPATGKVIVSRNTVFNEEDSWQWEDNRK----------APAFQFED 593

Query: 726  TNLEDENGLTGEPLGSL--EGIND-EEFQPTPQTH 821
             N E     T E   SL  +G N      PT  TH
Sbjct: 594  DNRETRRMTTSESNSSLSPDGSNSVSRSSPTISTH 628


>gb|KYP35826.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 529

 Score =  242 bits (618), Expect = 5e-73
 Identities = 115/242 (47%), Positives = 159/242 (65%), Gaps = 5/242 (2%)
 Frame = +3

Query: 12  AGNRYFFLLVDDFSRVMWVYFLKSKDEALGMFQKFRVLVENETGVKVKTLRTDRGGEFNL 191
           +G +YF   +DDFSR  WVYFLK K E    F+KF+V+VE ET   +K +R+DRGGEF  
Sbjct: 79  SGKKYFVSFIDDFSRKTWVYFLKEKLEVFETFKKFKVMVEKETSKFIKAIRSDRGGEFTS 138

Query: 192 KAFTEYCENTGLKHHFTAPYSPQQNGVVERRNRSVIEMARSMMKSMEVPDTLWAEAVRQA 371
             F +YCE  G+K   TAPYSPQQNGV ER+NR++++M RSM+K   +P   WAEAV+ A
Sbjct: 139 FEFNKYCEEHGIKRFLTAPYSPQQNGVAERKNRTILDMVRSMLKGKNMPKKFWAEAVQCA 198

Query: 372 VYIQNRVPTKTLGDTTPYERWSGKKPNLEHLRVFGCIAHSKVLRGHQQKLDSRSEMLVHL 551
           +Y+QNR P   LG+ TP E WS  KP++ HLRVFG +A+ +V R H+ KL+ RS+  + +
Sbjct: 199 IYVQNRCPHAKLGEKTPQEIWSSMKPSVSHLRVFGSVAYGQVPRQHRTKLEDRSKKYIFI 258

Query: 552 GTETGSKAYRLLDPVSGRIRVSRDVRFEEGKPWLWDETTKFKEN-----PRSTFTIKGYN 716
           G +  SKAY+L DP + ++ VSRDV  EE K W W  + + + +     P  T T +  +
Sbjct: 259 GYDEKSKAYKLFDPDNKKVVVSRDVHVEETKQWCWSNSAEVETSSDIVVPSKTTTTEFSD 318

Query: 717 QE 722
           +E
Sbjct: 319 EE 320


>dbj|BAG94704.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 1094

 Score =  250 bits (638), Expect = 3e-72
 Identities = 118/237 (49%), Positives = 158/237 (66%)
 Frame = +3

Query: 6   TPAGNRYFFLLVDDFSRVMWVYFLKSKDEALGMFQKFRVLVENETGVKVKTLRTDRGGEF 185
           TP G +YF LLVDD SR MW+  L  K EA    ++F+  VE E+G K++ LRTDRGGEF
Sbjct: 254 TPGGRKYFLLLVDDMSRFMWIRLLSGKHEAAAAIKQFKAGVEMESGRKLRALRTDRGGEF 313

Query: 186 NLKAFTEYCENTGLKHHFTAPYSPQQNGVVERRNRSVIEMARSMMKSMEVPDTLWAEAVR 365
               FTE+C + G+    TAPYSPQQNGVVERRN +V+  ARSM+K+  +P   W EAV 
Sbjct: 314 TSVEFTEFCADRGVSRQLTAPYSPQQNGVVERRNLTVVAAARSMLKAAGMPAQFWGEAVM 373

Query: 366 QAVYIQNRVPTKTLGDTTPYERWSGKKPNLEHLRVFGCIAHSKVLRGHQQKLDSRSEMLV 545
            AVY+ NR PTK+L   TPYE W G++P++EHL+VFGC+ + K ++ + +KLD R   +V
Sbjct: 374 AAVYLWNRSPTKSLDGVTPYEAWHGRRPSVEHLKVFGCVGYVKTVKPNLRKLDDRGTRMV 433

Query: 546 HLGTETGSKAYRLLDPVSGRIRVSRDVRFEEGKPWLWDETTKFKENPRSTFTIKGYN 716
            +G E GSKAYR+ DPVS R+ VSRDV F+E   W W +    +      FT++ ++
Sbjct: 434 FIGYEQGSKAYRMYDPVSRRVYVSRDVVFDEAAMWPWRDPEVTQTGGEEDFTVEFFS 490


>gb|AAG60200.1|AC084763_20 putative gag-pol polyprotein [Oryza sativa Japonica Group]
          Length = 1611

 Score =  251 bits (641), Expect = 3e-72
 Identities = 135/286 (47%), Positives = 172/286 (60%), Gaps = 1/286 (0%)
 Frame = +3

Query: 6    TPAGNRYFFLLVDDFSRVMWVYFLKSKDEALGMFQKFRVLVENETGVKVKTLRTDRGGEF 185
            TP G RYF LLVDD SR MWV  L SK EA    +  +   E E G K++ LRTD GGEF
Sbjct: 727  TPGGRRYFLLLVDDLSRYMWVMVLGSKGEAADAIRHAQAAAEAECGRKLRVLRTDNGGEF 786

Query: 186  NLKAFTEYCENTGLKHHFTAPYSPQQNGVVERRNRSVIEMARSMMKSMEVPDTLWAEAVR 365
                F  YC + G++ H+TAPYSPQQNGVVERRN++V+ MAR+++K   +P   W EAV 
Sbjct: 787  TAAEFASYCADEGIQRHYTAPYSPQQNGVVERRNQTVVGMARALLKQRGMPAIFWGEAVV 846

Query: 366  QAVYIQNRVPTKTLGDTTPYERWSGKKPNLEHLRVFGCIAHSKVLRGHQQKLDSRSEMLV 545
             A YI NR PTK L   TPYE W G+KP + HLRVFGC+A +K L GH  KLD RS   V
Sbjct: 847  TAAYILNRSPTKALDGRTPYEAWHGRKPAVSHLRVFGCLAFAKEL-GHIGKLDDRSTPGV 905

Query: 546  HLGTETGSKAYRLLDPVSGRIRVSRDVRFEEGKPWLWDETTKFKENPRSTFTIKGYNQED 725
             +G   GSKAYR+LDP + R+R++RDV F+EG+ W+WD+      +  ST T   +  E 
Sbjct: 906  FIGYAEGSKAYRILDPETQRVRITRDVVFDEGRGWVWDKAV----DDGSTPTYDDFTIEY 961

Query: 726  TNLEDENGLTGEPLGSLE-GINDEEFQPTPQTHAHGDEGFSTPSQS 860
             + E   G+      S+   + +    PTP TH       +T S S
Sbjct: 962  VHFEGAGGVGSSSSPSVSTPVPEPPPTPTP-THPRATTSTTTSSSS 1006