BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum22_contig00035375
         (617 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAX96622.1| retrotransposon protein, putative, Ty1-copia sub-...   266   1e-86
gb|KYP76577.1| Retrovirus-related Pol polyprotein from transposo...   259   8e-83
dbj|BAA22288.1| polyprotein [Oryza australiensis]                     277   9e-83
gb|ADB85430.1| putative retrotransposon protein [Phyllostachys e...   271   3e-82
gb|AAP03364.1| putative polyprotein [Oryza sativa Japonica Group]     263   3e-81
gb|ABA97342.2| retrotransposon protein, putative, Ty1-copia subc...   270   7e-81
gb|ABF96491.1| retrotransposon protein, putative, Ty1-copia subc...   263   3e-80
gb|PKI46224.1| hypothetical protein CRG98_033396 [Punica granatum]    249   6e-80
gb|AAP44605.1| putative polyprotein [Oryza sativa Japonica Group]     265   8e-79
gb|ADB85429.1| putative retrotransposon protein [Phyllostachys e...   266   9e-79
gb|ABF97047.1| retrotransposon protein, putative, Ty1-copia subc...   265   1e-78
gb|ABG22008.1| retrotransposon protein, putative, Ty1-copia subc...   261   3e-78
gb|AAV85747.1| Integrase core domain, putative [Oryza sativa Jap...   262   1e-77
emb|CAD39797.2| OSJNBa0071G03.10 [Oryza sativa Japonica Group]        259   2e-77
gb|AAC26250.1| contains similarity to reverse transcriptase (Pfa...   258   7e-77
gb|AMY96445.1| gag/pol protein [Momordica dioica]                     260   1e-76
gb|PKI69339.1| hypothetical protein CRG98_010273 [Punica granatum]    244   5e-76
gb|PNX87842.1| retrotransposon protein putative Ty1-copia subcla...   243   6e-75
gb|EXX50149.1| gag-pol fusion protein [Rhizophagus irregularis D...   254   8e-75
gb|OTG07182.1| putative zinc finger, CCHC-type [Helianthus annuus]    253   4e-74

>gb|AAX96622.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza
           sativa Japonica Group]
 gb|ABA92972.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 305

 Score =  266 bits (681), Expect = 1e-86
 Identities = 131/205 (63%), Positives = 161/205 (78%)
 Frame = +1

Query: 1   KIYRDRSKRLIGLSQSAYIDKILKRFSMQNSKKGYLPMQVKHGLSSDMCASTPAEVARMQ 180
           +IYRDRSKRLIGL QS YIDK+LKRF+MQ+SKKG+LPM     L  + C+ T  E  +M 
Sbjct: 14  RIYRDRSKRLIGLRQSTYIDKVLKRFNMQDSKKGFLPMSHDINLGKNQCSQTTDERNKMS 73

Query: 181 KVPYASAVGSIMYAVRCTRPDVAFAQNLTSRYQQNPGEIHWTAVKHILKYLRATRDMFIV 360
            +PYASA+GSIMYA+ CTRPDV++A + TSRYQ +PGE HW AVK+ILKYL  T+DMF+V
Sbjct: 74  VIPYASAIGSIMYAMLCTRPDVSYALSATSRYQSDPGETHWIAVKNILKYLIRTKDMFLV 133

Query: 361 YGGNPEAELSVTGYCDASWKCDKDDTKSQTGYIFVINGGAVDWKSKKQTTIAMSTTEAEY 540
           YGG  + EL V  Y DAS++ DKDD +SQ+G++F +NGGAV WKS KQ T+A STT+ EY
Sbjct: 134 YGG--QEELVVNDYTDASFQTDKDDFRSQSGFVFCLNGGAVSWKSSKQDTLANSTTKTEY 191

Query: 541 IAASEAQMEAVWIRKFISGLGVMPS 615
           IAASEA  EAVWI+KF+S LGVM S
Sbjct: 192 IAASEAAKEAVWIKKFVSQLGVMTS 216


>gb|KYP76577.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 368

 Score =  259 bits (662), Expect = 8e-83
 Identities = 128/205 (62%), Positives = 158/205 (77%)
 Frame = +1

Query: 1   KIYRDRSKRLIGLSQSAYIDKILKRFSMQNSKKGYLPMQVKHGLSSDMCASTPAEVARMQ 180
           KIYRDRSKR++GLSQS YID IL+R++M+NSK+GY P+     LS++ C  T  E  RM 
Sbjct: 127 KIYRDRSKRMLGLSQSMYIDTILRRYNMENSKRGYFPIGTGVTLSNEDCPKTLEERTRMN 186

Query: 181 KVPYASAVGSIMYAVRCTRPDVAFAQNLTSRYQQNPGEIHWTAVKHILKYLRATRDMFIV 360
           +VPYASAVG+IMY + CTRPDVAFA  + SRYQ NPGE +W  VK ILKYLR T+D F++
Sbjct: 187 RVPYASAVGAIMYIMTCTRPDVAFAPGVVSRYQANPGEENWKVVKTILKYLRRTQDQFLI 246

Query: 361 YGGNPEAELSVTGYCDASWKCDKDDTKSQTGYIFVINGGAVDWKSKKQTTIAMSTTEAEY 540
           YGG    EL + GY DAS+  DKDD+KS +GY+F + GGAV WKS KQ T+A STTEAEY
Sbjct: 247 YGG---TELMLKGYTDASFASDKDDSKSISGYVFTLYGGAVSWKSSKQATVADSTTEAEY 303

Query: 541 IAASEAQMEAVWIRKFISGLGVMPS 615
           IAAS+A  EAVW++KFI+ LGV+PS
Sbjct: 304 IAASDATKEAVWMKKFITELGVVPS 328


>dbj|BAA22288.1| polyprotein [Oryza australiensis]
          Length = 1317

 Score =  277 bits (708), Expect = 9e-83
 Identities = 138/205 (67%), Positives = 166/205 (80%)
 Frame = +1

Query: 1    KIYRDRSKRLIGLSQSAYIDKILKRFSMQNSKKGYLPMQVKHGLSSDMCASTPAEVARMQ 180
            +IYRDRSKRLIGLSQS YIDK+LKRF+M +SKKG+LPM     LS + C  T  E  +M 
Sbjct: 1031 RIYRDRSKRLIGLSQSTYIDKVLKRFNMHDSKKGFLPMSHGINLSKNQCPQTHDERNKMG 1090

Query: 181  KVPYASAVGSIMYAVRCTRPDVAFAQNLTSRYQQNPGEIHWTAVKHILKYLRATRDMFIV 360
             VPYASA+GSIMYA+ CTRPDV++A + TSRYQ +PGE HWTAVK+ILKYLR T+DMF+V
Sbjct: 1091 MVPYASAIGSIMYAMLCTRPDVSYALSATSRYQSDPGEGHWTAVKNILKYLRRTKDMFLV 1150

Query: 361  YGGNPEAELSVTGYCDASWKCDKDDTKSQTGYIFVINGGAVDWKSKKQTTIAMSTTEAEY 540
            YGG  E +L V+GY DAS++ DKDD +SQ+G++F +NGGAV WKS KQ T+A STTEAEY
Sbjct: 1151 YGG--EEDLVVSGYTDASFQTDKDDYRSQSGFVFCLNGGAVSWKSSKQDTVADSTTEAEY 1208

Query: 541  IAASEAQMEAVWIRKFISGLGVMPS 615
            IAASEA  EAVWI+KF+S LGVM S
Sbjct: 1209 IAASEAAKEAVWIKKFVSELGVMTS 1233


>gb|ADB85430.1| putative retrotransposon protein [Phyllostachys edulis]
          Length = 896

 Score =  271 bits (693), Expect = 3e-82
 Identities = 132/205 (64%), Positives = 165/205 (80%)
 Frame = +1

Query: 1    KIYRDRSKRLIGLSQSAYIDKILKRFSMQNSKKGYLPMQVKHGLSSDMCASTPAEVARMQ 180
            +IYRDRSKRLIGLSQ  YIDK+L RF+MQNSK+G+LPM     LS + C +T  E  +M 
Sbjct: 611  RIYRDRSKRLIGLSQEMYIDKVLNRFNMQNSKRGFLPMAHGINLSKNQCPTTTDERDKMS 670

Query: 181  KVPYASAVGSIMYAVRCTRPDVAFAQNLTSRYQQNPGEIHWTAVKHILKYLRATRDMFIV 360
             +PYASA+GSIMYA+ CTRPDV++A ++TSRYQ +P E HWTAVK+ILKYLR T+D+F+V
Sbjct: 671  DIPYASAIGSIMYAMICTRPDVSYALSVTSRYQADPSEGHWTAVKNILKYLRRTKDVFLV 730

Query: 361  YGGNPEAELSVTGYCDASWKCDKDDTKSQTGYIFVINGGAVDWKSKKQTTIAMSTTEAEY 540
            YGG  + EL V GY DAS++ DKDD +SQ+G++F++NGGAV WKS KQ T+A STTEAEY
Sbjct: 731  YGG--DEELVVNGYTDASFQTDKDDYRSQSGFVFILNGGAVSWKSSKQETVADSTTEAEY 788

Query: 541  IAASEAQMEAVWIRKFISGLGVMPS 615
            IAASEA  E VWIR FI+ LG++PS
Sbjct: 789  IAASEAAKEGVWIRNFITELGMVPS 813


>gb|AAP03364.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 657

 Score =  263 bits (673), Expect = 3e-81
 Identities = 131/205 (63%), Positives = 160/205 (78%)
 Frame = +1

Query: 1    KIYRDRSKRLIGLSQSAYIDKILKRFSMQNSKKGYLPMQVKHGLSSDMCASTPAEVARMQ 180
            +IYR+RSKRLIGLSQS YIDK+LKRF+MQ SKKG+LPM     L  + C     E  +M 
Sbjct: 395  RIYRERSKRLIGLSQSTYIDKLLKRFNMQYSKKGFLPMSHGINLGKNQCPQATDERNKMS 454

Query: 181  KVPYASAVGSIMYAVRCTRPDVAFAQNLTSRYQQNPGEIHWTAVKHILKYLRATRDMFIV 360
             +PYASA+G IMYA+ CTRPDV++A + TSRYQ +PGE HW AVK+ILKYLR T+DMF+V
Sbjct: 455  VIPYASAIGCIMYAMLCTRPDVSYALSATSRYQLDPGESHWIAVKNILKYLRRTKDMFLV 514

Query: 361  YGGNPEAELSVTGYCDASWKCDKDDTKSQTGYIFVINGGAVDWKSKKQTTIAMSTTEAEY 540
            YGG  + EL V GY DAS++ DKDD +SQ+ ++F +NGGAV WKS KQ T+A STTEAEY
Sbjct: 515  YGG--QEELVVNGYTDASFQTDKDDFRSQSKFVFCLNGGAVSWKSSKQDTVADSTTEAEY 572

Query: 541  IAASEAQMEAVWIRKFISGLGVMPS 615
            IAASEA  +AVWI+KF+S LGVM S
Sbjct: 573  IAASEAAKKAVWIKKFVSQLGVMTS 597


>gb|ABA97342.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1050

 Score =  270 bits (689), Expect = 7e-81
 Identities = 133/205 (64%), Positives = 161/205 (78%)
 Frame = +1

Query: 1    KIYRDRSKRLIGLSQSAYIDKILKRFSMQNSKKGYLPMQVKHGLSSDMCASTPAEVARMQ 180
            +IYRDRSKRLIGLSQS YIDK+LKRF+MQ+SKKG+LPM     L  + C  T  E  +M 
Sbjct: 765  RIYRDRSKRLIGLSQSTYIDKVLKRFNMQDSKKGFLPMSHGINLGKNQCPQTTDERNKMS 824

Query: 181  KVPYASAVGSIMYAVRCTRPDVAFAQNLTSRYQQNPGEIHWTAVKHILKYLRATRDMFIV 360
             +PYASA+GSIMYA+ CT PDV++A + TSRYQ +PGE HW AVK+ILKYLR T+DMF+V
Sbjct: 825  VIPYASAIGSIMYAMLCTHPDVSYALSATSRYQSDPGESHWIAVKNILKYLRRTKDMFLV 884

Query: 361  YGGNPEAELSVTGYCDASWKCDKDDTKSQTGYIFVINGGAVDWKSKKQTTIAMSTTEAEY 540
            YGG  + EL V GY DAS++ DKDD +SQ+G++F +NGGAV WKS KQ T+  S TEAEY
Sbjct: 885  YGG--QEELVVKGYTDASFQTDKDDFRSQSGFVFCLNGGAVSWKSSKQDTVVDSITEAEY 942

Query: 541  IAASEAQMEAVWIRKFISGLGVMPS 615
            IAASEA  EAVWI+KF+S LGVM S
Sbjct: 943  IAASEAAKEAVWIKKFVSQLGVMTS 967


>gb|ABF96491.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 767

 Score =  263 bits (673), Expect = 3e-80
 Identities = 131/205 (63%), Positives = 160/205 (78%)
 Frame = +1

Query: 1    KIYRDRSKRLIGLSQSAYIDKILKRFSMQNSKKGYLPMQVKHGLSSDMCASTPAEVARMQ 180
            +IYR+RSKRLIGLSQS YIDK+LKRF+MQ SKKG+LPM     L  + C     E  +M 
Sbjct: 505  RIYRERSKRLIGLSQSTYIDKLLKRFNMQYSKKGFLPMSHGINLGKNQCPQATDERNKMS 564

Query: 181  KVPYASAVGSIMYAVRCTRPDVAFAQNLTSRYQQNPGEIHWTAVKHILKYLRATRDMFIV 360
             +PYASA+G IMYA+ CTRPDV++A + TSRYQ +PGE HW AVK+ILKYLR T+DMF+V
Sbjct: 565  VIPYASAIGCIMYAMLCTRPDVSYALSATSRYQLDPGESHWIAVKNILKYLRRTKDMFLV 624

Query: 361  YGGNPEAELSVTGYCDASWKCDKDDTKSQTGYIFVINGGAVDWKSKKQTTIAMSTTEAEY 540
            YGG  + EL V GY DAS++ DKDD +SQ+ ++F +NGGAV WKS KQ T+A STTEAEY
Sbjct: 625  YGG--QEELVVNGYTDASFQTDKDDFRSQSKFVFCLNGGAVSWKSSKQDTVADSTTEAEY 682

Query: 541  IAASEAQMEAVWIRKFISGLGVMPS 615
            IAASEA  +AVWI+KF+S LGVM S
Sbjct: 683  IAASEAAKKAVWIKKFVSQLGVMTS 707


>gb|PKI46224.1| hypothetical protein CRG98_033396 [Punica granatum]
          Length = 287

 Score =  249 bits (636), Expect = 6e-80
 Identities = 126/205 (61%), Positives = 159/205 (77%)
 Frame = +1

Query: 1   KIYRDRSKRLIGLSQSAYIDKILKRFSMQNSKKGYLPMQVKHGLSSDMCASTPAEVARMQ 180
           +IYRDRS+ L+GLSQSAYIDK+L+RFSMQ+SKKG LPM     LS     ST  E  R+ 
Sbjct: 14  RIYRDRSRSLLGLSQSAYIDKVLRRFSMQDSKKGSLPMLHGISLSKAQSPSTREERDRIN 73

Query: 181 KVPYASAVGSIMYAVRCTRPDVAFAQNLTSRYQQNPGEIHWTAVKHILKYLRATRDMFIV 360
           ++ YASA+GSIMYA+ CTR DV++A ++TSRY  +PGE HW AVK+ILKYLR T++MF+V
Sbjct: 74  RISYASAIGSIMYAMLCTRSDVSYALSMTSRYHSDPGERHWIAVKNILKYLRRTKEMFLV 133

Query: 361 YGGNPEAELSVTGYCDASWKCDKDDTKSQTGYIFVINGGAVDWKSKKQTTIAMSTTEAEY 540
           YGG  + EL V GY DAS++ DKDD++SQ+ Y+F +N GAV WKS KQ T+A STTEAEY
Sbjct: 134 YGG--KEELIVRGYTDASFQTDKDDSRSQSRYVFSLNEGAVSWKSSKQETVADSTTEAEY 191

Query: 541 IAASEAQMEAVWIRKFISGLGVMPS 615
            AAS A  EAVWI+KF++ L V+PS
Sbjct: 192 TAASNAAKEAVWIKKFVTELVVVPS 216


>gb|AAP44605.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1161

 Score =  265 bits (677), Expect = 8e-79
 Identities = 133/205 (64%), Positives = 161/205 (78%)
 Frame = +1

Query: 1    KIYRDRSKRLIGLSQSAYIDKILKRFSMQNSKKGYLPMQVKHGLSSDMCASTPAEVARMQ 180
            +IYRDRSKRLIGLSQS YIDK+LKRF+MQ+SKKG+LPM     L  + C  T  E  +M 
Sbjct: 893  RIYRDRSKRLIGLSQSTYIDKVLKRFNMQDSKKGFLPMSHGINLGKNQCPQTTDERNKMS 952

Query: 181  KVPYASAVGSIMYAVRCTRPDVAFAQNLTSRYQQNPGEIHWTAVKHILKYLRATRDMFIV 360
             +PYASA+GSIMYA+ CTR DV++A + TSRYQ + GE HW AVK+ILKYLR T+DMF+V
Sbjct: 953  VIPYASAIGSIMYAMLCTRLDVSYALSATSRYQSDLGESHWIAVKNILKYLRRTKDMFLV 1012

Query: 361  YGGNPEAELSVTGYCDASWKCDKDDTKSQTGYIFVINGGAVDWKSKKQTTIAMSTTEAEY 540
            YG   + EL V GY DAS++ DKDD +SQ+G++F +NGGAV WKS KQ T+A STTEAEY
Sbjct: 1013 YG--RQEELVVNGYTDASFQTDKDDFRSQSGFVFCLNGGAVSWKSSKQDTVADSTTEAEY 1070

Query: 541  IAASEAQMEAVWIRKFISGLGVMPS 615
            IAASEA  EAVWI+KF+S LGVM S
Sbjct: 1071 IAASEAAKEAVWIKKFVSQLGVMTS 1095


>gb|ADB85429.1| putative retrotransposon protein [Phyllostachys edulis]
          Length = 1313

 Score =  266 bits (679), Expect = 9e-79
 Identities = 134/207 (64%), Positives = 165/207 (79%), Gaps = 2/207 (0%)
 Frame = +1

Query: 1    KIYRDRSKRLIGLSQSAYIDKILKRFSMQNSKKGYLPMQVKHGLSSDMCA--STPAEVAR 174
            KIYRDRS+RLIGLSQS YIDK+L RF+MQN+KKG+LPM   HG+S       ST  E  R
Sbjct: 1027 KIYRDRSRRLIGLSQSTYIDKVLIRFNMQNTKKGFLPMS--HGISPSKSQRPSTTDERDR 1084

Query: 175  MQKVPYASAVGSIMYAVRCTRPDVAFAQNLTSRYQQNPGEIHWTAVKHILKYLRATRDMF 354
            M  +PYASA+GSIMYA+ CTR DV++A ++TSRYQ +PGE HWTAVK+ILKYLR T+D F
Sbjct: 1085 MNGIPYASAIGSIMYAMICTRQDVSYALSVTSRYQADPGECHWTAVKNILKYLRRTKDAF 1144

Query: 355  IVYGGNPEAELSVTGYCDASWKCDKDDTKSQTGYIFVINGGAVDWKSKKQTTIAMSTTEA 534
            ++YGG  + EL V GY DAS++ DKDD +SQ+G++F++NGGAV WKS KQ T+A STT+A
Sbjct: 1145 LIYGG--DEELVVNGYTDASFQTDKDDYRSQSGFVFILNGGAVSWKSSKQETVADSTTKA 1202

Query: 535  EYIAASEAQMEAVWIRKFISGLGVMPS 615
            EYIAASEA  E VWIR FI+ LGV+PS
Sbjct: 1203 EYIAASEAAKEGVWIRNFIAELGVVPS 1229


>gb|ABF97047.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1248

 Score =  265 bits (677), Expect = 1e-78
 Identities = 133/205 (64%), Positives = 161/205 (78%)
 Frame = +1

Query: 1    KIYRDRSKRLIGLSQSAYIDKILKRFSMQNSKKGYLPMQVKHGLSSDMCASTPAEVARMQ 180
            +IYRDRSKRLIGLSQS YIDK+LKRF+MQ+SKKG+LPM     L  + C  T  E  +M 
Sbjct: 980  RIYRDRSKRLIGLSQSTYIDKVLKRFNMQDSKKGFLPMSHGINLGKNQCPQTTDERNKMS 1039

Query: 181  KVPYASAVGSIMYAVRCTRPDVAFAQNLTSRYQQNPGEIHWTAVKHILKYLRATRDMFIV 360
             +PYASA+GSIMYA+ CTR DV++A + TSRYQ + GE HW AVK+ILKYLR T+DMF+V
Sbjct: 1040 VIPYASAIGSIMYAMLCTRLDVSYALSATSRYQSDLGESHWIAVKNILKYLRRTKDMFLV 1099

Query: 361  YGGNPEAELSVTGYCDASWKCDKDDTKSQTGYIFVINGGAVDWKSKKQTTIAMSTTEAEY 540
            YG   + EL V GY DAS++ DKDD +SQ+G++F +NGGAV WKS KQ T+A STTEAEY
Sbjct: 1100 YG--RQEELVVNGYTDASFQTDKDDFRSQSGFVFCLNGGAVSWKSSKQDTVADSTTEAEY 1157

Query: 541  IAASEAQMEAVWIRKFISGLGVMPS 615
            IAASEA  EAVWI+KF+S LGVM S
Sbjct: 1158 IAASEAAKEAVWIKKFVSQLGVMTS 1182


>gb|ABG22008.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 932

 Score =  261 bits (666), Expect = 3e-78
 Identities = 129/205 (62%), Positives = 160/205 (78%)
 Frame = +1

Query: 1    KIYRDRSKRLIGLSQSAYIDKILKRFSMQNSKKGYLPMQVKHGLSSDMCASTPAEVARMQ 180
            +IYRDRS+RLIG SQS YIDK+LKRF+MQ+SKKG+LP+     L  + C  T  E  +M 
Sbjct: 656  RIYRDRSRRLIG-SQSTYIDKVLKRFNMQDSKKGFLPLSHGINLGKNQCPQTTDERNKMS 714

Query: 181  KVPYASAVGSIMYAVRCTRPDVAFAQNLTSRYQQNPGEIHWTAVKHILKYLRATRDMFIV 360
             +PYASA+GSIMYA+ CTRPDV +A + TS+YQ +PGE HW AVK+ILKYLR T+DMF++
Sbjct: 715  VIPYASAIGSIMYAMLCTRPDVPYALSATSQYQSDPGESHWIAVKNILKYLRRTKDMFLI 774

Query: 361  YGGNPEAELSVTGYCDASWKCDKDDTKSQTGYIFVINGGAVDWKSKKQTTIAMSTTEAEY 540
            YGG  + EL V  Y DAS++ DKDD +SQ+G++F +NGGAV WKS KQ T+A STTEAEY
Sbjct: 775  YGG--QEELVVNNYTDASFQTDKDDFRSQSGFVFCLNGGAVSWKSSKQDTVADSTTEAEY 832

Query: 541  IAASEAQMEAVWIRKFISGLGVMPS 615
            IAASEA  EA WI+KF+S LGVM S
Sbjct: 833  IAASEAAKEAAWIKKFVSQLGVMTS 857


>gb|AAV85747.1| Integrase core domain, putative [Oryza sativa Japonica Group]
 gb|AAX92956.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa
            Japonica Group]
 gb|ABA92827.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1184

 Score =  262 bits (669), Expect = 1e-77
 Identities = 131/205 (63%), Positives = 159/205 (77%)
 Frame = +1

Query: 1    KIYRDRSKRLIGLSQSAYIDKILKRFSMQNSKKGYLPMQVKHGLSSDMCASTPAEVARMQ 180
            +IYRDRSKRLIGLSQS YIDK+LKRF+MQ+SKKG+LPM     L  + C  T  E  +M 
Sbjct: 902  RIYRDRSKRLIGLSQSTYIDKVLKRFNMQDSKKGFLPMSHGINLGKNQCPQTTDERNKMS 961

Query: 181  KVPYASAVGSIMYAVRCTRPDVAFAQNLTSRYQQNPGEIHWTAVKHILKYLRATRDMFIV 360
             +PYASA+GSIMYA+ CTRPDV++A + TSRYQ +PGE HW AVK+ILKYLR T+DMF+ 
Sbjct: 962  VIPYASAIGSIMYAMLCTRPDVSYALSATSRYQSDPGESHWIAVKNILKYLRRTKDMFLA 1021

Query: 361  YGGNPEAELSVTGYCDASWKCDKDDTKSQTGYIFVINGGAVDWKSKKQTTIAMSTTEAEY 540
            YGG  + EL V GY DAS++ DKDD +SQ+G++F +NGGAV WKS KQ  +  STTEAEY
Sbjct: 1022 YGG--QEELVVNGYTDASFQIDKDDFRSQSGFVFCLNGGAVSWKSSKQDIVVDSTTEAEY 1079

Query: 541  IAASEAQMEAVWIRKFISGLGVMPS 615
            IAAS    EAVWI+KF+S LGVM S
Sbjct: 1080 IAAS----EAVWIKKFVSQLGVMTS 1100


>emb|CAD39797.2| OSJNBa0071G03.10 [Oryza sativa Japonica Group]
          Length = 948

 Score =  259 bits (662), Expect = 2e-77
 Identities = 126/198 (63%), Positives = 156/198 (78%)
 Frame = +1

Query: 1    KIYRDRSKRLIGLSQSAYIDKILKRFSMQNSKKGYLPMQVKHGLSSDMCASTPAEVARMQ 180
            +IYRDRSKRLIGLSQS YIDK+LKRF+MQ+SKKG+LPM     L  + C  T  E  +M 
Sbjct: 753  RIYRDRSKRLIGLSQSTYIDKVLKRFNMQDSKKGFLPMSHDINLGKNQCPQTTDERNKMS 812

Query: 181  KVPYASAVGSIMYAVRCTRPDVAFAQNLTSRYQQNPGEIHWTAVKHILKYLRATRDMFIV 360
             +PYASA+GSIMYA+ CT PDV++A + T+RYQ +PGE HW AVK+ILKYLR T DMF+V
Sbjct: 813  VIPYASAIGSIMYAMLCTCPDVSYALSATNRYQSDPGESHWIAVKNILKYLRRTEDMFLV 872

Query: 361  YGGNPEAELSVTGYCDASWKCDKDDTKSQTGYIFVINGGAVDWKSKKQTTIAMSTTEAEY 540
            YGG  + EL V GY DAS++ DKDD +S++G++F +NGG V WKS KQ T+A STTEAEY
Sbjct: 873  YGG--QEELVVNGYTDASFQTDKDDFRSRSGFVFCLNGGVVSWKSSKQDTVADSTTEAEY 930

Query: 541  IAASEAQMEAVWIRKFIS 594
            IAASEA  +AVWI+KF+S
Sbjct: 931  IAASEAAKDAVWIKKFVS 948


>gb|AAC26250.1| contains similarity to reverse transcriptase (Pfam: rvt.hmm, score
            19.29) [Arabidopsis thaliana]
 emb|CAB80804.1| putative retrotransposon protein [Arabidopsis thaliana]
          Length = 964

 Score =  258 bits (658), Expect = 7e-77
 Identities = 128/205 (62%), Positives = 158/205 (77%)
 Frame = +1

Query: 1    KIYRDRSKRLIGLSQSAYIDKILKRFSMQNSKKGYLPMQVKHGLSSDMCASTPAEVARMQ 180
            +IYRDR  ++IGLSQ  YIDK+L RF+M +SKKG++PM     LS   C ST  E  RM 
Sbjct: 678  RIYRDRLNKIIGLSQDTYIDKVLHRFNMHDSKKGFIPMSHGITLSKTQCPSTHDERERMS 737

Query: 181  KVPYASAVGSIMYAVRCTRPDVAFAQNLTSRYQQNPGEIHWTAVKHILKYLRATRDMFIV 360
            K+PYASA+GSIMYA+  TRPDVA A ++TSRYQ +PGE HW  V++I KYLR T+D F+V
Sbjct: 738  KIPYASAIGSIMYAMLYTRPDVACALSMTSRYQSDPGESHWIVVRNIFKYLRRTKDKFLV 797

Query: 361  YGGNPEAELSVTGYCDASWKCDKDDTKSQTGYIFVINGGAVDWKSKKQTTIAMSTTEAEY 540
            YGG+   EL V+GY DAS++ DKDD +SQ+G+ F +NGGAV WKS KQ+T+A STTEAEY
Sbjct: 798  YGGS--EELVVSGYTDASFQTDKDDFRSQSGFFFCLNGGAVSWKSTKQSTVADSTTEAEY 855

Query: 541  IAASEAQMEAVWIRKFISGLGVMPS 615
            IAASEA  E VWIRKFI+ LGV+PS
Sbjct: 856  IAASEAAKEVVWIRKFITELGVVPS 880


>gb|AMY96445.1| gag/pol protein [Momordica dioica]
          Length = 1313

 Score =  260 bits (664), Expect = 1e-76
 Identities = 125/205 (60%), Positives = 161/205 (78%)
 Frame = +1

Query: 1    KIYRDRSKRLIGLSQSAYIDKILKRFSMQNSKKGYLPMQVKHGLSSDMCASTPAEVARMQ 180
            +IYRDRS + IG+SQS YIDK+L RF MQ+SKKG LP +    LS + C  TP EV  M+
Sbjct: 1057 RIYRDRSNKTIGMSQSTYIDKVLSRFKMQDSKKGLLPFRHGIHLSKEQCPKTPQEVEDMR 1116

Query: 181  KVPYASAVGSIMYAVRCTRPDVAFAQNLTSRYQQNPGEIHWTAVKHILKYLRATRDMFIV 360
             +PY+SA+GS+MYA+ CTRPDV +A ++ SRYQ NPG  HWTAVK+ILKYLR TR+MF+V
Sbjct: 1117 NIPYSSAIGSLMYAMLCTRPDVCYALSIVSRYQSNPGRDHWTAVKNILKYLRRTRNMFLV 1176

Query: 361  YGGNPEAELSVTGYCDASWKCDKDDTKSQTGYIFVINGGAVDWKSKKQTTIAMSTTEAEY 540
            YGG  + +L+V GY D+S++ DKDD+KSQ+G +F +NGGAV W+S KQT +A ST EAEY
Sbjct: 1177 YGG--DKDLAVKGYTDSSFQTDKDDSKSQSG-VFTLNGGAVSWRSSKQTCVADSTCEAEY 1233

Query: 541  IAASEAQMEAVWIRKFISGLGVMPS 615
            +AA EA  EAVWIRKF++ LGV+P+
Sbjct: 1234 VAACEAAKEAVWIRKFLTDLGVVPN 1258


>gb|PKI69339.1| hypothetical protein CRG98_010273 [Punica granatum]
          Length = 431

 Score =  244 bits (622), Expect = 5e-76
 Identities = 120/205 (58%), Positives = 155/205 (75%)
 Frame = +1

Query: 1   KIYRDRSKRLIGLSQSAYIDKILKRFSMQNSKKGYLPMQVKHGLSSDMCASTPAEVARMQ 180
           +IYRDR KRLIGLSQ+ Y+DK+LKRF+MQ+S++G LPM+    LS  M   TP E  +M 
Sbjct: 144 RIYRDRPKRLIGLSQALYLDKVLKRFNMQDSRRGLLPMRHGIHLSKAMSPKTPVEREKMS 203

Query: 181 KVPYASAVGSIMYAVRCTRPDVAFAQNLTSRYQQNPGEIHWTAVKHILKYLRATRDMFIV 360
            VPYA A+GS+MY + CTR D+A+A ++TSRY+ N G  HWTA+K+ILKYLR T+++ +V
Sbjct: 204 HVPYAPAIGSLMYVMLCTRSDIAYAVSMTSRYRSNSGPDHWTAIKNILKYLRRTKEIVLV 263

Query: 361 YGGNPEAELSVTGYCDASWKCDKDDTKSQTGYIFVINGGAVDWKSKKQTTIAMSTTEAEY 540
           YGG    EL +  + D+ ++ D DD KS +GYIF  NGGAV WKS KQ T A  TTEAEY
Sbjct: 264 YGG---GELRLDEFTDSDFQSDVDDRKSISGYIFTCNGGAVSWKSSKQETTADFTTEAEY 320

Query: 541 IAASEAQMEAVWIRKFISGLGVMPS 615
           IAAS+A+MEAVWIRKF++ LGV+PS
Sbjct: 321 IAASDAEMEAVWIRKFVTELGVVPS 345


>gb|PNX87842.1| retrotransposon protein putative Ty1-copia subclass, partial
           [Trifolium pratense]
          Length = 511

 Score =  243 bits (621), Expect = 6e-75
 Identities = 120/186 (64%), Positives = 145/186 (77%)
 Frame = +1

Query: 1   KIYRDRSKRLIGLSQSAYIDKILKRFSMQNSKKGYLPMQVKHGLSSDMCASTPAEVARMQ 180
           KIYRDRSKRL+GLSQS YID ILKR++M+ SK+GYLP+ +   LS + C  T  E  RM 
Sbjct: 329 KIYRDRSKRLLGLSQSMYIDTILKRYNMEKSKRGYLPVGMGVSLSRENCPKTLEERERMS 388

Query: 181 KVPYASAVGSIMYAVRCTRPDVAFAQNLTSRYQQNPGEIHWTAVKHILKYLRATRDMFIV 360
           +VPYASAVG+IMY + CTRPDVA+A  +TSRYQ NPGE HW  VK ILKYLR T+D F++
Sbjct: 389 RVPYASAVGAIMYTMTCTRPDVAYALGVTSRYQANPGEEHWKVVKTILKYLRRTKDQFLI 448

Query: 361 YGGNPEAELSVTGYCDASWKCDKDDTKSQTGYIFVINGGAVDWKSKKQTTIAMSTTEAEY 540
           YG    +ELS+ GY DAS+  DKDD+KS +GY+F +NGGA+ WKS KQ T+A STTEAEY
Sbjct: 449 YG---NSELSLKGYTDASFASDKDDSKSISGYVFTLNGGAISWKSSKQATVADSTTEAEY 505

Query: 541 IAASEA 558
           IAASEA
Sbjct: 506 IAASEA 511


>gb|EXX50149.1| gag-pol fusion protein [Rhizophagus irregularis DAOM 197198w]
          Length = 1303

 Score =  254 bits (650), Expect = 8e-75
 Identities = 126/205 (61%), Positives = 156/205 (76%)
 Frame = +1

Query: 1    KIYRDRSKRLIGLSQSAYIDKILKRFSMQNSKKGYLPMQVKHGLSSDMCASTPAEVARMQ 180
            +I RDR KRLIGLSQ  Y++K+LKRFSM+NSKKG LP+Q    LS     ST  E+A M 
Sbjct: 1014 RILRDRKKRLIGLSQGTYLEKVLKRFSMENSKKGELPIQSNAKLSKTQSPSTDEEIAEMS 1073

Query: 181  KVPYASAVGSIMYAVRCTRPDVAFAQNLTSRYQQNPGEIHWTAVKHILKYLRATRDMFIV 360
            +VPYASAVGSIMYA+ CTRPDVAFA ++ SRYQ NPG  HW AVK+ILKYLR T++M +V
Sbjct: 1074 RVPYASAVGSIMYAMTCTRPDVAFALSMVSRYQGNPGRAHWIAVKNILKYLRRTKNMVLV 1133

Query: 361  YGGNPEAELSVTGYCDASWKCDKDDTKSQTGYIFVINGGAVDWKSKKQTTIAMSTTEAEY 540
             GG+    L V GY DAS++ D+D  +SQ+G++F++NGGAV WKS KQ T+A ST E+EY
Sbjct: 1134 LGGSD--TLRVEGYTDASFQTDRDSGRSQSGWVFLLNGGAVTWKSSKQETVADSTCESEY 1191

Query: 541  IAASEAQMEAVWIRKFISGLGVMPS 615
            IAASEA  EA W++ FI  LGV+PS
Sbjct: 1192 IAASEASKEAAWLKNFIGDLGVVPS 1216


>gb|OTG07182.1| putative zinc finger, CCHC-type [Helianthus annuus]
          Length = 1325

 Score =  253 bits (645), Expect = 4e-74
 Identities = 121/205 (59%), Positives = 161/205 (78%)
 Frame = +1

Query: 1    KIYRDRSKRLIGLSQSAYIDKILKRFSMQNSKKGYLPMQVKHGLSSDMCASTPAEVARMQ 180
            KIYR+RSKRL+GL+QS YID++++RF M+NSKKG +PM     L      S   E+ +M+
Sbjct: 1036 KIYRNRSKRLLGLTQSTYIDQVMRRFKMENSKKGGVPMTKGTVLDKSQAPSEDREIKQME 1095

Query: 181  KVPYASAVGSIMYAVRCTRPDVAFAQNLTSRYQQNPGEIHWTAVKHILKYLRATRDMFIV 360
             VPYASA+G IMYA+ CTRPDV++A ++TSRYQQNPG  HWTAVK+ILKYLR T+DMF++
Sbjct: 1096 GVPYASAIGFIMYAMVCTRPDVSYALSMTSRYQQNPGVAHWTAVKNILKYLRRTKDMFLI 1155

Query: 361  YGGNPEAELSVTGYCDASWKCDKDDTKSQTGYIFVINGGAVDWKSKKQTTIAMSTTEAEY 540
            +GG  E EL+V  Y DAS++ D+D ++SQTG++F +NGGAV WKS KQ+ +A STTE+EY
Sbjct: 1156 FGGVNE-ELTVKCYTDASFQTDRDTSRSQTGFVFTLNGGAVSWKSSKQSVVADSTTESEY 1214

Query: 541  IAASEAQMEAVWIRKFISGLGVMPS 615
            IAAS+   EA W++KFI+ L V+PS
Sbjct: 1215 IAASDVAKEAAWMKKFITDLDVVPS 1239