BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum22_contig00035265
         (391 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KVH95767.1| Protein of unknown function DUF177 [Cynara cardun...    82   1e-15
ref|XP_021969785.1| large ribosomal RNA subunit accumulation pro...    77   6e-14
ref|XP_023736460.1| large ribosomal RNA subunit accumulation pro...    77   6e-14

>gb|KVH95767.1| Protein of unknown function DUF177 [Cynara cardunculus var.
           scolymus]
          Length = 333

 Score = 81.6 bits (200), Expect = 1e-15
 Identities = 48/109 (44%), Positives = 60/109 (55%), Gaps = 8/109 (7%)
 Frame = -3

Query: 305 VKMSLMLSSTFTAPCFSVNNVNAS--------LSHPHCNSINCTVLQKCIFTNAHTSTIP 150
           VKM L+LSS+F +PCF  NNV  +        LSHPH NSI+C +LQK +F N H S I 
Sbjct: 24  VKMPLILSSSFVSPCFYENNVKGAHVLVPQITLSHPHHNSISCNILQKRLFANKHASMIL 83

Query: 149 TRKSRSEFIAIKSMNSSYGTIGDENVMEXXXXXXXXXXXXXXXDSPWEG 3
             KS  EFI   S+NS+Y   G+ N+ +               DSPWEG
Sbjct: 84  KHKSPLEFITRASVNSNYELAGESNMED--DWRDQEDVGADPMDSPWEG 130


>ref|XP_021969785.1| large ribosomal RNA subunit accumulation protein YCED homolog 1,
           chloroplastic [Helianthus annuus]
 gb|OTG22479.1| Protein of unknown function (DUF177) [Helianthus annuus]
          Length = 315

 Score = 76.6 bits (187), Expect = 6e-14
 Identities = 50/108 (46%), Positives = 58/108 (53%), Gaps = 9/108 (8%)
 Frame = -3

Query: 299 MSLMLSSTFTAPCFSVNNVNA--------SLSHPHCNSINCTVLQKCIFTNAHTS-TIPT 147
           M L+LSS+F  PCF VNNV A        SLSHP   S +C +LQK +F N H S TI  
Sbjct: 1   MPLILSSSFMTPCFYVNNVKAPRLLIPRTSLSHPCYKSTHCNILQKHLFANKHRSTTILK 60

Query: 146 RKSRSEFIAIKSMNSSYGTIGDENVMEXXXXXXXXXXXXXXXDSPWEG 3
            KSR EF   +S+NS+Y    DENV E               DSPWEG
Sbjct: 61  HKSRLEFKTRESLNSNYELASDENVTE----DEWMDQDVDELDSPWEG 104


>ref|XP_023736460.1| large ribosomal RNA subunit accumulation protein YCED homolog 1,
           chloroplastic [Lactuca sativa]
          Length = 326

 Score = 76.6 bits (187), Expect = 6e-14
 Identities = 49/108 (45%), Positives = 58/108 (53%), Gaps = 9/108 (8%)
 Frame = -3

Query: 299 MSLMLSSTFTAPCFSVNNVNA--------SLSHPHCNSINCTVLQKCIFTNAHTSTIPTR 144
           M L+LSS+F  PC  V+ V          SLSHPH NSI+C +LQKC+F N H S I   
Sbjct: 1   MPLILSSSFMPPCSFVDTVKEPHIIFPQPSLSHPHHNSIHCNILQKCLFPNNHVSMILKH 60

Query: 143 KSRSEFIAIK-SMNSSYGTIGDENVMEXXXXXXXXXXXXXXXDSPWEG 3
           K+  + IA + SMNSSY    DEN ME               DSPWEG
Sbjct: 61  KAPMKLIARESSMNSSYELFSDENSME--DDWIDQGEGDDSMDSPWEG 106