BLASTX nr result

ID: Chrysanthemum22_contig00035237 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum22_contig00035237
         (396 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KVH88195.1| Nucleotide-binding, alpha-beta plait [Cynara card...    57   9e-07

>gb|KVH88195.1| Nucleotide-binding, alpha-beta plait [Cynara cardunculus var.
           scolymus]
          Length = 1081

 Score = 57.0 bits (136), Expect = 9e-07
 Identities = 37/70 (52%), Positives = 41/70 (58%), Gaps = 13/70 (18%)
 Frame = +2

Query: 197 SSFLSEDLHLHPHPNERQIGFWKNTATPT---AADGVKEYALGDTS----------SGHS 337
           SSFLSE++ L   PNERQIGFWK    P      DG K YALGD+S          S   
Sbjct: 55  SSFLSEEVQL---PNERQIGFWKTDGMPDDYGPKDG-KVYALGDSSLASLPLEKQTSSEP 110

Query: 338 HMLKRFDVPD 367
           HMLKRFDVP+
Sbjct: 111 HMLKRFDVPN 120


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