BLASTX nr result

ID: Chrysanthemum22_contig00035192 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum22_contig00035192
         (362 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_023734924.1| probable E3 ubiquitin-protein ligase ARI10 [...    60   4e-08
gb|KVH97899.1| Zinc finger, C6HC-type [Cynara cardunculus var. s...    55   2e-06

>ref|XP_023734924.1| probable E3 ubiquitin-protein ligase ARI10 [Lactuca sativa]
 gb|PLY97282.1| hypothetical protein LSAT_1X38601 [Lactuca sativa]
          Length = 295

 Score = 60.1 bits (144), Expect = 4e-08
 Identities = 27/55 (49%), Positives = 33/55 (60%)
 Frame = -1

Query: 221 NPTDIMLMNVAXXXXXXXXXXCNFFVQEPSVYLHIVCRCGYTFCYGHGKNHNNTH 57
           NP D+MLM +A          CNF+V++     HI CRCGY FCYG GK HN +H
Sbjct: 232 NPEDLMLMELAKNKKWRRCPSCNFYVEKNEGCQHISCRCGYHFCYGCGKEHNGSH 286


>gb|KVH97899.1| Zinc finger, C6HC-type [Cynara cardunculus var. scolymus]
          Length = 280

 Score = 55.5 bits (132), Expect = 2e-06
 Identities = 26/58 (44%), Positives = 33/58 (56%)
 Frame = -1

Query: 230 GLPNPTDIMLMNVAXXXXXXXXXXCNFFVQEPSVYLHIVCRCGYTFCYGHGKNHNNTH 57
           G  +P D+MLM +A          C FFV++    LHI CRCGY FCYG G  H+ +H
Sbjct: 218 GERDPEDVMLMELAKKKKWRRCPRCKFFVEKAQGCLHISCRCGYEFCYGCGLMHHGSH 275