BLASTX nr result

ID: Chrysanthemum22_contig00034932 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum22_contig00034932
         (810 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|PLY76158.1| hypothetical protein LSAT_4X36021 [Lactuca sativa]      49   1e-09
gb|KVH88199.1| NADH-ubiquinone reductase complex 1 MLRQ subunit ...    50   8e-09
ref|XP_022022125.1| uncharacterized protein LOC110922100 [Helian...    49   4e-08
ref|XP_023763660.1| putative HVA22-like protein g [Lactuca sativ...    57   6e-06

>gb|PLY76158.1| hypothetical protein LSAT_4X36021 [Lactuca sativa]
          Length = 161

 Score = 48.5 bits (114), Expect(2) = 1e-09
 Identities = 27/52 (51%), Positives = 35/52 (67%), Gaps = 1/52 (1%)
 Frame = +1

Query: 136 LKSISNFLALSLKTSISGADVLLAVSTVT-QLIHLPGV*VNKSNRSMVPEVD 288
           LKS ++   + +    +G  V LAV +VT QL H PGV VNK+NRSM+PEVD
Sbjct: 48  LKSRADLFPIYILLGFTGGAVFLAVRSVTMQLFHHPGVQVNKTNRSMMPEVD 99



 Score = 43.1 bits (100), Expect(2) = 1e-09
 Identities = 24/45 (53%), Positives = 30/45 (66%), Gaps = 1/45 (2%)
 Frame = +3

Query: 291 SPQLSHAYGDKFISK*VIRKVAHIQKCDGTVDTN-CGDVYTTEGS 422
           SP  + A GDKFISK V+RKVAHIQK D  V  +   ++Y+T  S
Sbjct: 100 SPDSALASGDKFISKSVLRKVAHIQKRDDAVPMDGTANIYSTRSS 144


>gb|KVH88199.1| NADH-ubiquinone reductase complex 1 MLRQ subunit [Cynara
           cardunculus var. scolymus]
          Length = 140

 Score = 49.7 bits (117), Expect(2) = 8e-09
 Identities = 27/52 (51%), Positives = 35/52 (67%), Gaps = 1/52 (1%)
 Frame = +1

Query: 136 LKSISNFLALSLKTSISGADVLLAVSTVTQ-LIHLPGV*VNKSNRSMVPEVD 288
           LKS ++   + +    +G  V LA+ +VTQ L H PGV VNK+NRSMVPEVD
Sbjct: 28  LKSRADLFPIYILLGFTGGAVFLAIKSVTQQLFHHPGVHVNKANRSMVPEVD 79



 Score = 39.3 bits (90), Expect(2) = 8e-09
 Identities = 21/45 (46%), Positives = 29/45 (64%), Gaps = 2/45 (4%)
 Frame = +3

Query: 294 PQLSHAYGDKFISK*VIRKVAHIQKCDGTV--DTNCGDVYTTEGS 422
           P  + A GDKFI+K V+RKVAHIQ+ D  +  D+   D+Y +  S
Sbjct: 81  PDSALASGDKFITKSVLRKVAHIQQRDDVIPMDSRXPDIYKSRRS 125


>ref|XP_022022125.1| uncharacterized protein LOC110922100 [Helianthus annuus]
 gb|OTF87012.1| hypothetical protein HannXRQ_Chr17g0557071 [Helianthus annuus]
          Length = 156

 Score = 48.9 bits (115), Expect(2) = 4e-08
 Identities = 27/52 (51%), Positives = 35/52 (67%), Gaps = 1/52 (1%)
 Frame = +1

Query: 136 LKSISNFLALSLKTSISGADVLLAVSTVTQ-LIHLPGV*VNKSNRSMVPEVD 288
           LKS ++   + +    +G  V LAV +VTQ L H PGV VNK+NRSM+PEVD
Sbjct: 42  LKSSADMFPIYILLGFTGGAVFLAVRSVTQQLFHHPGVQVNKTNRSMMPEVD 93



 Score = 37.7 bits (86), Expect(2) = 4e-08
 Identities = 17/31 (54%), Positives = 24/31 (77%)
 Frame = +3

Query: 291 SPQLSHAYGDKFISK*VIRKVAHIQKCDGTV 383
           +P ++ A GDKF+++ V+RKV HIQK D TV
Sbjct: 94  TPDIALASGDKFMNRSVLRKVGHIQKRDDTV 124


>ref|XP_023763660.1| putative HVA22-like protein g [Lactuca sativa]
 gb|PLY85584.1| hypothetical protein LSAT_2X55280 [Lactuca sativa]
          Length = 232

 Score = 57.0 bits (136), Expect = 6e-06
 Identities = 34/70 (48%), Positives = 39/70 (55%), Gaps = 8/70 (11%)
 Frame = +2

Query: 2   GKGFVYDVMLKP-LY*DMKHISKSTKQFLDEVWDVAIYYWWPNKDL*NQ-------YLIS 157
           G G VYD ML+P +Y     I +S KQF D  WDVAIYYW  + +L          YLIS
Sbjct: 85  GTGVVYDTMLRPFIYRHETDIERSLKQFRDRAWDVAIYYWQNSTELGQTKFFDILGYLIS 144

Query: 158 *PSASRPASQ 187
            PS SR  SQ
Sbjct: 145 KPSPSRTQSQ 154


Top