BLASTX nr result

ID: Chrysanthemum22_contig00034867 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum22_contig00034867
         (498 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|PLY99835.1| hypothetical protein LSAT_4X32541 [Lactuca sativa]      55   6e-17
ref|XP_022018170.1| rho GTPase-activating protein 3-like [Helian...    48   8e-15

>gb|PLY99835.1| hypothetical protein LSAT_4X32541 [Lactuca sativa]
          Length = 456

 Score = 54.7 bits (130), Expect(3) = 6e-17
 Identities = 26/38 (68%), Positives = 32/38 (84%)
 Frame = -1

Query: 366 MSLLKTLVMITLREREGSSSGFEPLSSCANNRSPNNKV 253
           M+LLKTL+M TL ERE SS+GFEP+SSCA+  +PNN V
Sbjct: 321 MNLLKTLIMKTLHEREESSTGFEPVSSCADCPTPNNNV 358



 Score = 47.8 bits (112), Expect(3) = 6e-17
 Identities = 26/49 (53%), Positives = 31/49 (63%)
 Frame = -2

Query: 188 WSFLRKSGSLVEYDYMLGKSSHVTFMCDLLGSKDNTKHERQHHILLIIG 42
           WSF RKSGS+VEYD ML KS  +T   D L S   +KHE+Q   + I G
Sbjct: 381 WSFPRKSGSVVEYDSMLEKSLSITCTNDPLKSDHKSKHEQQEREVEIEG 429



 Score = 32.3 bits (72), Expect(3) = 6e-17
 Identities = 15/25 (60%), Positives = 18/25 (72%)
 Frame = -3

Query: 253 EYPYLLKSVTLKRLGSENEEQYGVF 179
           E  Y L++ TL RLGSE+EEQY  F
Sbjct: 359 ESSYSLRTATLNRLGSESEEQYWSF 383


>ref|XP_022018170.1| rho GTPase-activating protein 3-like [Helianthus annuus]
 gb|OTF92686.1| putative rho GTPase activating protein with PAK-box/P21-Rho-binding
           domain-containing protein [Helianthus annuus]
          Length = 470

 Score = 48.1 bits (113), Expect(3) = 8e-15
 Identities = 26/52 (50%), Positives = 33/52 (63%), Gaps = 3/52 (5%)
 Frame = -2

Query: 188 WSFLRKSGSLVEYDYMLGKSSHVTFMCDLLGSKDNTK---HERQHHILLIIG 42
           WSF RKSGS+VEYDYM GK+S V+   D L S +  K   HE+   ++ I G
Sbjct: 375 WSFSRKSGSIVEYDYMSGKNSPVSSKDDSLESVERAKQEQHEQHREVVNIEG 426



 Score = 47.8 bits (112), Expect(3) = 8e-15
 Identities = 23/37 (62%), Positives = 29/37 (78%)
 Frame = -1

Query: 366 MSLLKTLVMITLREREGSSSGFEPLSSCANNRSPNNK 256
           M+LLKTLV+ TLRERE SS  F+P+ SC +  SPNN+
Sbjct: 315 MNLLKTLVIKTLREREESSPNFKPIISCEDYPSPNNR 351



 Score = 31.6 bits (70), Expect(3) = 8e-15
 Identities = 15/26 (57%), Positives = 19/26 (73%)
 Frame = -3

Query: 256 SEYPYLLKSVTLKRLGSENEEQYGVF 179
           SEY   L+S TL RLG+ENEE++  F
Sbjct: 352 SEYRSPLQSATLNRLGTENEERFWSF 377