BLASTX nr result

ID: Chrysanthemum22_contig00034838 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum22_contig00034838
         (351 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KVI05837.1| F-box domain, cyclin-like protein [Cynara cardunc...    82   1e-15
ref|XP_023758962.1| F-box/kelch-repeat protein At1g51550 [Lactuc...    74   6e-13
ref|XP_021984598.1| F-box/kelch-repeat protein At1g51550 [Helian...    74   8e-13
gb|OTG16992.1| putative kelch repeat-containing F-box family pro...    74   9e-13
dbj|GAY62966.1| hypothetical protein CUMW_221820 [Citrus unshiu]       55   2e-06
ref|XP_006465174.1| PREDICTED: F-box/kelch-repeat protein At1g51...    55   2e-06
ref|XP_006427768.1| F-box/kelch-repeat protein At1g51550 [Citrus...    55   2e-06

>gb|KVI05837.1| F-box domain, cyclin-like protein [Cynara cardunculus var.
           scolymus]
          Length = 448

 Score = 81.6 bits (200), Expect = 1e-15
 Identities = 39/68 (57%), Positives = 45/68 (66%)
 Frame = -1

Query: 204 FAMTCKKTNHLLHSNNDLWKTICIRDWGHPTLDAFXXXXXXXXXXXXIRDWRSLYQRLRN 25
           FAMTCKKT  L HS+  LWK+IC RDWGH T+DA               DW+ LYQRLRN
Sbjct: 49  FAMTCKKTTRLTHSHT-LWKSICTRDWGHSTVDALLTSSSSSSL-----DWKRLYQRLRN 102

Query: 24  MDRLSCFN 1
           +DR+SCFN
Sbjct: 103 LDRVSCFN 110


>ref|XP_023758962.1| F-box/kelch-repeat protein At1g51550 [Lactuca sativa]
 gb|PLY89113.1| hypothetical protein LSAT_4X89221 [Lactuca sativa]
          Length = 439

 Score = 73.9 bits (180), Expect = 6e-13
 Identities = 35/67 (52%), Positives = 43/67 (64%)
 Frame = -1

Query: 204 FAMTCKKTNHLLHSNNDLWKTICIRDWGHPTLDAFXXXXXXXXXXXXIRDWRSLYQRLRN 25
           FAMTCKKT  L  S+  LWK+IC RDWGH T+DA               DW+ LYQRLRN
Sbjct: 42  FAMTCKKTTRLTQSHT-LWKSICTRDWGHSTVDALVNSSSSPLSI----DWKRLYQRLRN 96

Query: 24  MDRLSCF 4
           +DR++C+
Sbjct: 97  LDRVACY 103


>ref|XP_021984598.1| F-box/kelch-repeat protein At1g51550 [Helianthus annuus]
          Length = 427

 Score = 73.6 bits (179), Expect = 8e-13
 Identities = 38/68 (55%), Positives = 43/68 (63%)
 Frame = -1

Query: 204 FAMTCKKTNHLLHSNNDLWKTICIRDWGHPTLDAFXXXXXXXXXXXXIRDWRSLYQRLRN 25
           FAMTCKKT  LL  +  LWK+IC RDWGH TLDA               DW  LY+RLRN
Sbjct: 43  FAMTCKKTL-LLTRSQTLWKSICARDWGHSTLDA----------CSPSLDWIQLYRRLRN 91

Query: 24  MDRLSCFN 1
           +DR+SCFN
Sbjct: 92  LDRVSCFN 99


>gb|OTG16992.1| putative kelch repeat-containing F-box family protein [Helianthus
           annuus]
          Length = 487

 Score = 73.6 bits (179), Expect = 9e-13
 Identities = 38/68 (55%), Positives = 43/68 (63%)
 Frame = -1

Query: 204 FAMTCKKTNHLLHSNNDLWKTICIRDWGHPTLDAFXXXXXXXXXXXXIRDWRSLYQRLRN 25
           FAMTCKKT  LL  +  LWK+IC RDWGH TLDA               DW  LY+RLRN
Sbjct: 103 FAMTCKKTL-LLTRSQTLWKSICARDWGHSTLDA----------CSPSLDWIQLYRRLRN 151

Query: 24  MDRLSCFN 1
           +DR+SCFN
Sbjct: 152 LDRVSCFN 159


>dbj|GAY62966.1| hypothetical protein CUMW_221820 [Citrus unshiu]
          Length = 466

 Score = 55.5 bits (132), Expect = 2e-06
 Identities = 26/68 (38%), Positives = 38/68 (55%)
 Frame = -1

Query: 204 FAMTCKKTNHLLHSNNDLWKTICIRDWGHPTLDAFXXXXXXXXXXXXIRDWRSLYQRLRN 25
           FAMTCK+   L  S++ LW++IC RDWGH  +DAF               W  LY+++  
Sbjct: 42  FAMTCKRFRSLA-SSDTLWESICRRDWGHKQVDAFKYSCSQYQMMMMTVPWMRLYRQVTQ 100

Query: 24  MDRLSCFN 1
           ++ +SC N
Sbjct: 101 LESVSCRN 108


>ref|XP_006465174.1| PREDICTED: F-box/kelch-repeat protein At1g51550 [Citrus sinensis]
          Length = 466

 Score = 55.5 bits (132), Expect = 2e-06
 Identities = 26/68 (38%), Positives = 38/68 (55%)
 Frame = -1

Query: 204 FAMTCKKTNHLLHSNNDLWKTICIRDWGHPTLDAFXXXXXXXXXXXXIRDWRSLYQRLRN 25
           FAMTCK+   L  S++ LW++IC RDWGH  +DAF               W  LY+++  
Sbjct: 42  FAMTCKRFRSLA-SSDTLWESICRRDWGHKQVDAFKYSCNQYQMMMTTVPWMRLYRQVTQ 100

Query: 24  MDRLSCFN 1
           ++ +SC N
Sbjct: 101 LESVSCRN 108


>ref|XP_006427768.1| F-box/kelch-repeat protein At1g51550 [Citrus clementina]
 gb|ESR41008.1| hypothetical protein CICLE_v10025550mg [Citrus clementina]
          Length = 466

 Score = 55.5 bits (132), Expect = 2e-06
 Identities = 26/68 (38%), Positives = 38/68 (55%)
 Frame = -1

Query: 204 FAMTCKKTNHLLHSNNDLWKTICIRDWGHPTLDAFXXXXXXXXXXXXIRDWRSLYQRLRN 25
           FAMTCK+   L  S++ LW++IC RDWGH  +DAF               W  LY+++  
Sbjct: 42  FAMTCKRFRSLA-SSDTLWESICRRDWGHKQVDAFKYSCSQYQMMMMTVPWMRLYRQVTQ 100

Query: 24  MDRLSCFN 1
           ++ +SC N
Sbjct: 101 LESVSCRN 108


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