BLASTX nr result

ID: Chrysanthemum22_contig00034754 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum22_contig00034754
         (597 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_021973036.1| F-box/FBD/LRR-repeat protein At5g56420-like ...    76   7e-16
ref|XP_021993467.1| F-box/FBD/LRR-repeat protein At5g56420-like ...    75   2e-15
gb|KVI09669.1| F-box domain, cyclin-like protein [Cynara cardunc...    78   2e-13

>ref|XP_021973036.1| F-box/FBD/LRR-repeat protein At5g56420-like [Helianthus annuus]
 gb|OTG20529.1| putative F-box domain, Leucine-rich repeat domain, L domain-like
           protein [Helianthus annuus]
          Length = 365

 Score = 75.9 bits (185), Expect(2) = 7e-16
 Identities = 41/84 (48%), Positives = 57/84 (67%), Gaps = 1/84 (1%)
 Frame = -1

Query: 597 LEVISFRLLRLTVSSCYCNFSGHQKLILLTPKLVFLNLKGLIPVNLEAYEVPLLEAIRID 418
           LEVI F LLRLT+SSC+ +   ++KL+LLTPKL  L + GLIP++ EA E+P L+ + ID
Sbjct: 203 LEVIGFELLRLTISSCFYHPVPYEKLVLLTPKLKVLEISGLIPMSFEACELPGLDTVHID 262

Query: 417 HCYP-VATMHRRGAQFDKNQQKDN 349
            C+  V +  R   Q D+ +QK N
Sbjct: 263 CCFSFVRSFDRIVQQPDEEEQKVN 286



 Score = 35.8 bits (81), Expect(2) = 7e-16
 Identities = 19/43 (44%), Positives = 27/43 (62%), Gaps = 4/43 (9%)
 Frame = -3

Query: 346 MNILKRF---TNTKSVQLSLSTIEII-LSHGMLAEEPCPLKKL 230
           +N++K F    N K + LS ST++++ LSH  L EEPCP   L
Sbjct: 285 VNLIKMFWCIRNAKCIHLSPSTVKLLSLSHEKLVEEPCPFVNL 327


>ref|XP_021993467.1| F-box/FBD/LRR-repeat protein At5g56420-like isoform X1 [Helianthus
           annuus]
 ref|XP_021993468.1| F-box/FBD/LRR-repeat protein At5g56420-like isoform X2 [Helianthus
           annuus]
 gb|OTG07929.1| putative F-box domain, Leucine-rich repeat domain, L domain-like
           protein [Helianthus annuus]
          Length = 365

 Score = 74.7 bits (182), Expect(2) = 2e-15
 Identities = 40/84 (47%), Positives = 56/84 (66%), Gaps = 1/84 (1%)
 Frame = -1

Query: 597 LEVISFRLLRLTVSSCYCNFSGHQKLILLTPKLVFLNLKGLIPVNLEAYEVPLLEAIRID 418
           LEVI F LLRLT+SSC+ +   ++KL+L+TPKL  L + GLIP++ EA E+P L+ + ID
Sbjct: 203 LEVIGFELLRLTISSCFYHPVPYEKLVLMTPKLKVLEISGLIPMSFEACELPGLDTVHID 262

Query: 417 HCYP-VATMHRRGAQFDKNQQKDN 349
            C+  V    R   Q D+ +QK N
Sbjct: 263 CCFSFVRAFDRIVQQPDEGEQKVN 286



 Score = 35.4 bits (80), Expect(2) = 2e-15
 Identities = 19/43 (44%), Positives = 27/43 (62%), Gaps = 4/43 (9%)
 Frame = -3

Query: 346 MNILKRF---TNTKSVQLSLSTIEII-LSHGMLAEEPCPLKKL 230
           +N++K F    N K + LS ST++++ LSH  L EEPCP   L
Sbjct: 285 VNLIKMFWCLRNAKCIHLSPSTVKLLSLSHDKLDEEPCPFVNL 327


>gb|KVI09669.1| F-box domain, cyclin-like protein [Cynara cardunculus var.
           scolymus]
          Length = 369

 Score = 78.2 bits (191), Expect = 2e-13
 Identities = 46/102 (45%), Positives = 64/102 (62%), Gaps = 3/102 (2%)
 Frame = -1

Query: 597 LEVISFRLLRLTVSSCYCNFSGHQKLILLTPKLVFLNLKGLIPVNLEAYEVPLLEAIRID 418
           LEVI  RL RLT+SSC+ +   ++KL+LLTPKLV L L GLIP++ EA E+P L+ + ID
Sbjct: 210 LEVIGSRLSRLTISSCFYHPIPYEKLVLLTPKLVLLELDGLIPMSFEASELPFLDTVHID 269

Query: 417 HCYP---VATMHRRGAQFDKNQQKDNE*ISLSALQILNLFSC 301
            C+    VA+ H    Q D++QQK         L ++N+  C
Sbjct: 270 CCFSFPRVASAH----QPDESQQK---------LNLINILRC 298


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