BLASTX nr result

ID: Chrysanthemum22_contig00034505 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum22_contig00034505
         (496 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|OTG29447.1| putative armadillo-type fold protein [Helianthus ...    51   2e-09
ref|XP_017235335.1| PREDICTED: RRP12-like protein [Daucus carota...    47   1e-07
gb|KZN11205.1| hypothetical protein DCAR_003861 [Daucus carota s...    48   3e-07
ref|XP_017228985.1| PREDICTED: RRP12-like protein isoform X1 [Da...    48   3e-07
gb|KVI01141.1| Armadillo-like helical [Cynara cardunculus var. s...    59   7e-07
ref|XP_021984189.1| RRP12-like protein [Helianthus annuus] >gi|1...    57   3e-06

>gb|OTG29447.1| putative armadillo-type fold protein [Helianthus annuus]
          Length = 912

 Score = 50.8 bits (120), Expect(2) = 2e-09
 Identities = 33/83 (39%), Positives = 40/83 (48%)
 Frame = -2

Query: 273 TIGEFASVADKGVVFQFFRSIVVKLLKATQEARKVQXXXXXXXXXXXXXXXETSLSKMRX 94
           TIGEFAS+ADK VV + ++S + KLLK T EA K+Q               ETS S  R 
Sbjct: 663 TIGEFASIADKSVVSKLYKSTMEKLLKVTHEASKIQNTKGSSSMEIDNLPNETSPSLTRA 722

Query: 93  XXXXXXXXXXXXXATTEVDPLFE 25
                         T EVD LF+
Sbjct: 723 KLYDLAAALLPGFGTKEVDHLFD 745



 Score = 38.9 bits (89), Expect(2) = 2e-09
 Identities = 21/35 (60%), Positives = 28/35 (80%), Gaps = 1/35 (2%)
 Frame = -1

Query: 496 LDVLRSSAPEVLSALSGILVKSS-NDSGCLKVALL 395
           LDVLRSSA E+LS LS + +KS+ +D G L+VA+L
Sbjct: 622 LDVLRSSAREILSTLSRVFMKSTKDDGGSLRVAIL 656


>ref|XP_017235335.1| PREDICTED: RRP12-like protein [Daucus carota subsp. sativus]
 gb|KZN04227.1| hypothetical protein DCAR_005064 [Daucus carota subsp. sativus]
          Length = 1270

 Score = 46.6 bits (109), Expect(2) = 1e-07
 Identities = 35/92 (38%), Positives = 42/92 (45%)
 Frame = -2

Query: 276 ATIGEFASVADKGVVFQFFRSIVVKLLKATQEARKVQXXXXXXXXXXXXXXXETSLSKMR 97
           ATIGEFAS++DK VV +F+ + + KLLK T+EA K Q               E  LS  R
Sbjct: 658 ATIGEFASISDKVVVSRFYTATMRKLLKVTEEAGKAQNSKSSNSMEVDSSSSEVPLSVAR 717

Query: 96  XXXXXXXXXXXXXXATTEVDPLFEFLIRPALK 1
                            E D LF   I PALK
Sbjct: 718 AQLFDLAVSLLPGLDPKETDLLF-VAIEPALK 748



 Score = 36.6 bits (83), Expect(2) = 1e-07
 Identities = 19/34 (55%), Positives = 24/34 (70%)
 Frame = -1

Query: 496 LDVLRSSAPEVLSALSGILVKSSNDSGCLKVALL 395
           L+ LRSSA E+LS LSGI +K+S D G L  A +
Sbjct: 627 LNALRSSAREILSVLSGIFLKTSKDDGGLLQATI 660


>gb|KZN11205.1| hypothetical protein DCAR_003861 [Daucus carota subsp. sativus]
          Length = 1359

 Score = 47.8 bits (112), Expect(2) = 3e-07
 Identities = 35/92 (38%), Positives = 43/92 (46%)
 Frame = -2

Query: 276  ATIGEFASVADKGVVFQFFRSIVVKLLKATQEARKVQXXXXXXXXXXXXXXXETSLSKMR 97
            ATIGEFAS++DK VV +F+ + + KLLK T+EA K Q               E SLS  R
Sbjct: 748  ATIGEFASISDKVVVSRFYTATMRKLLKVTEEAGKAQNSKSSNSMEVDSSSSEVSLSVAR 807

Query: 96   XXXXXXXXXXXXXXATTEVDPLFEFLIRPALK 1
                             E D LF   + PALK
Sbjct: 808  AQLFDLAVSLLPGLDPKETDLLF-VALEPALK 838



 Score = 34.3 bits (77), Expect(2) = 3e-07
 Identities = 18/34 (52%), Positives = 23/34 (67%)
 Frame = -1

Query: 496 LDVLRSSAPEVLSALSGILVKSSNDSGCLKVALL 395
           L+ LR SA E+LS LSGI +K+S D G L  A +
Sbjct: 717 LNALRLSAREILSVLSGIFLKTSKDDGGLLQATI 750


>ref|XP_017228985.1| PREDICTED: RRP12-like protein isoform X1 [Daucus carota subsp.
           sativus]
 ref|XP_017228989.1| PREDICTED: RRP12-like protein isoform X2 [Daucus carota subsp.
           sativus]
          Length = 1268

 Score = 47.8 bits (112), Expect(2) = 3e-07
 Identities = 35/92 (38%), Positives = 43/92 (46%)
 Frame = -2

Query: 276 ATIGEFASVADKGVVFQFFRSIVVKLLKATQEARKVQXXXXXXXXXXXXXXXETSLSKMR 97
           ATIGEFAS++DK VV +F+ + + KLLK T+EA K Q               E SLS  R
Sbjct: 657 ATIGEFASISDKVVVSRFYTATMRKLLKVTEEAGKAQNSKSSNSMEVDSSSSEVSLSVAR 716

Query: 96  XXXXXXXXXXXXXXATTEVDPLFEFLIRPALK 1
                            E D LF   + PALK
Sbjct: 717 AQLFDLAVSLLPGLDPKETDLLF-VALEPALK 747



 Score = 34.3 bits (77), Expect(2) = 3e-07
 Identities = 18/34 (52%), Positives = 23/34 (67%)
 Frame = -1

Query: 496 LDVLRSSAPEVLSALSGILVKSSNDSGCLKVALL 395
           L+ LR SA E+LS LSGI +K+S D G L  A +
Sbjct: 626 LNALRLSAREILSVLSGIFLKTSKDDGGLLQATI 659


>gb|KVI01141.1| Armadillo-like helical [Cynara cardunculus var. scolymus]
          Length = 1253

 Score = 58.5 bits (140), Expect = 7e-07
 Identities = 43/93 (46%), Positives = 48/93 (51%), Gaps = 2/93 (2%)
 Frame = -2

Query: 273 TIGEFASVADKGVVFQFFRSIVVKLLKATQEARKVQXXXXXXXXXXXXXXXETSLS--KM 100
           TIGEFAS+ADKGVV +FF+S + KLLK T+EA KVQ               ETSLS    
Sbjct: 661 TIGEFASIADKGVVSRFFKSTMQKLLKVTEEAGKVQNTKGSSSMEIDNSSNETSLSLTSY 720

Query: 99  RXXXXXXXXXXXXXXATTEVDPLFEFLIRPALK 1
           R               T EVD LF   I PALK
Sbjct: 721 RARLYDLAVSLLPGLGTKEVDLLF-VAIEPALK 752


>ref|XP_021984189.1| RRP12-like protein [Helianthus annuus]
 gb|OTG16636.1| putative ARM repeat superfamily protein [Helianthus annuus]
          Length = 1239

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 38/91 (41%), Positives = 47/91 (51%)
 Frame = -2

Query: 273 TIGEFASVADKGVVFQFFRSIVVKLLKATQEARKVQXXXXXXXXXXXXXXXETSLSKMRX 94
           TIGEFAS+ADK VV + F+S + KLLK TQEA K+Q               E SLS+ R 
Sbjct: 655 TIGEFASIADKSVVSRLFKSTMSKLLKVTQEAGKIQNTKGSSSMEIDNSSNEPSLSQTRA 714

Query: 93  XXXXXXXXXXXXXATTEVDPLFEFLIRPALK 1
                         T EVD L+   ++PALK
Sbjct: 715 KLYDLGVALLPGFGTEEVDLLYA-AVQPALK 744


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