BLASTX nr result

ID: Chrysanthemum22_contig00034476 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum22_contig00034476
         (543 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|PLY73134.1| hypothetical protein LSAT_2X112881 [Lactuca sativa]     60   4e-07
ref|XP_023734643.1| LOW QUALITY PROTEIN: pumilio homolog 4 [Lact...    60   4e-07
gb|KVI09697.1| Armadillo-like helical [Cynara cardunculus var. s...    57   3e-06

>gb|PLY73134.1| hypothetical protein LSAT_2X112881 [Lactuca sativa]
          Length = 863

 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 26/32 (81%), Positives = 29/32 (90%)
 Frame = +1

Query: 403 WVTKSDGLIGLTSPSMGGRRKSFADILQEGLE 498
           W+ + DGLIGLT+P MGGRRKSFADILQEGLE
Sbjct: 209 WIERGDGLIGLTAPGMGGRRKSFADILQEGLE 240


>ref|XP_023734643.1| LOW QUALITY PROTEIN: pumilio homolog 4 [Lactuca sativa]
          Length = 986

 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 26/32 (81%), Positives = 29/32 (90%)
 Frame = +1

Query: 403 WVTKSDGLIGLTSPSMGGRRKSFADILQEGLE 498
           W+ + DGLIGLT+P MGGRRKSFADILQEGLE
Sbjct: 209 WIERGDGLIGLTAPGMGGRRKSFADILQEGLE 240


>gb|KVI09697.1| Armadillo-like helical [Cynara cardunculus var. scolymus]
          Length = 917

 Score = 57.4 bits (137), Expect = 3e-06
 Identities = 25/32 (78%), Positives = 28/32 (87%)
 Frame = +1

Query: 403 WVTKSDGLIGLTSPSMGGRRKSFADILQEGLE 498
           W+ + DGLIGLT+P MG RRKSFADILQEGLE
Sbjct: 186 WIDRGDGLIGLTAPGMGSRRKSFADILQEGLE 217


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