BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum22_contig00034158
         (511 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_021971203.1| sigma factor binding protein 1, chloroplasti...    74   9e-14
ref|XP_023741351.1| sigma factor binding protein 1, chloroplasti...    66   1e-10

>ref|XP_021971203.1| sigma factor binding protein 1, chloroplastic-like [Helianthus
           annuus]
          Length = 142

 Score = 74.3 bits (181), Expect = 9e-14
 Identities = 51/135 (37%), Positives = 70/135 (51%), Gaps = 32/135 (23%)
 Frame = -2

Query: 420 MEKLPTFRHEKISXXXXXXXXXXXXYISNPMKVKTTPSEFRAVVQQLTGKYANS-SQPYE 244
           MEK PT +HEK +            YISNPMK+K +PSEFRAVVQQLTG+YA S    +E
Sbjct: 1   MEKQPTAKHEKRAQKTSKKAPVKVVYISNPMKIKASPSEFRAVVQQLTGRYATSPPSSHE 60

Query: 243 FATKVLKDGLEEEKEE---------ASRAVH-----------SSDIPYA----------- 157
               V KD L++++++          +  VH            SD+ Y            
Sbjct: 61  LPGIVNKDNLDDQEDDDNAEAEVGFGTGGVHHQQTWHRSHATRSDLCYESRCREDQAVTD 120

Query: 156 NFFITPKMLEGYSPM 112
           +F ITP+ML+G+SP+
Sbjct: 121 DFIITPQMLDGFSPL 135


>ref|XP_023741351.1| sigma factor binding protein 1, chloroplastic [Lactuca sativa]
 gb|PLY68025.1| hypothetical protein LSAT_5X156980 [Lactuca sativa]
          Length = 133

 Score = 65.9 bits (159), Expect = 1e-10
 Identities = 46/126 (36%), Positives = 62/126 (49%), Gaps = 23/126 (18%)
 Frame = -2

Query: 420 MEKLPTFRHEKISXXXXXXXXXXXXYISNPMKVKTTPSEFRAVVQQLTGKYANSSQPYEF 241
           MEKLP+ + EK S            YISNPMK+K TPSEFRAVVQQ TG+YA S  P   
Sbjct: 1   MEKLPSVKLEKRSQKTSKKNPVKVVYISNPMKIKATPSEFRAVVQQFTGRYAISPPPGAL 60

Query: 240 ATKVLKD------GLEEEKEEASRAVHSSDIPYA-----------------NFFITPKML 130
                +D      G +++ +  +RA   + +  A                 +  ITP+ML
Sbjct: 61  TGVPERDHEVGSLGAQQKWQLINRASIDAQLTVAGSDPSHESACREDQVSDDLIITPQML 120

Query: 129 EGYSPM 112
           E +SP+
Sbjct: 121 ESFSPL 126