BLASTX nr result

ID: Chrysanthemum22_contig00034091 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum22_contig00034091
         (530 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KVI10448.1| Regulatory protein RecX [Cynara cardunculus var. ...    90   4e-18
ref|XP_023728359.1| uncharacterized protein LOC111876065 isoform...    74   2e-12
ref|XP_023728357.1| uncharacterized protein LOC111876065 isoform...    74   4e-12
ref|XP_023728356.1| uncharacterized protein LOC111876065 isoform...    74   4e-12
ref|XP_022012696.1| uncharacterized protein LOC110912314 [Helian...    56   6e-06

>gb|KVI10448.1| Regulatory protein RecX [Cynara cardunculus var. scolymus]
          Length = 352

 Score = 90.1 bits (222), Expect = 4e-18
 Identities = 52/115 (45%), Positives = 70/115 (60%), Gaps = 12/115 (10%)
 Frame = +2

Query: 8   KIIVRCCSNSRKKSEDFPVTYILKRALKLK--NDSAVTPKE-EKLEVND---------DL 151
           KIIVRCCSN  ++S+DFPV Y  K++ K    +DS  +PK+ E  EV           ++
Sbjct: 29  KIIVRCCSNFGERSKDFPVRYTPKKSSKFNKLDDSTRSPKDSENYEVRRFTNPDSSSVEI 88

Query: 152 SNDKGKSRIGLFSDDKLVDYDFNSGNPRPIEKNIRKKNVRAEMGEREYEWRSAES 316
           SN + +SRIG   D+K  DYDF SG  +  EK IR   VR+E+GE +Y+WR  ES
Sbjct: 89  SNAEERSRIGSILDEKSPDYDFRSGKLKSKEKKIRNSAVRSEVGEHDYKWRFPES 143



 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 31/63 (49%), Positives = 42/63 (66%)
 Frame = +2

Query: 320 DSVVAPKYYENHKMSRFTNDDLSDVEVLDDREKSRIGLFLDEKLREDVYKGDNLRSKEKN 499
           DS  +PK  EN+++ RFTN D S VE+ +  E+SRIG  LDEK  +  ++   L+SKEK 
Sbjct: 62  DSTRSPKDSENYEVRRFTNPDSSSVEISNAEERSRIGSILDEKSPDYDFRSGKLKSKEKK 121

Query: 500 IRN 508
           IRN
Sbjct: 122 IRN 124


>ref|XP_023728359.1| uncharacterized protein LOC111876065 isoform X3 [Lactuca sativa]
          Length = 270

 Score = 73.6 bits (179), Expect = 2e-12
 Identities = 48/115 (41%), Positives = 62/115 (53%), Gaps = 12/115 (10%)
 Frame = +2

Query: 11  IIVRCCSNSRKKSEDFPVTYILKRALKLKNDSAVTP--KEEK-LEVND---------DLS 154
           IIVRCCSNS + S + PV Y  K++LK    +  TP  KE K  EV           + S
Sbjct: 30  IIVRCCSNSDESSMNSPVRYTPKKSLKYNKVNDYTPAAKESKNFEVRRFTNPDSLYVEFS 89

Query: 155 NDKGKSRIGLFSDDKLVDYDFNSGNPRPIEKNIRKKNVRAEMGEREYEWRSAESK 319
           N   +S IG    +K +D DF  G+    EK     NVR E+GE +Y+WRSA+SK
Sbjct: 90  NAGERSSIGFSVHEKSLDNDFKEGHVISKEKKTYNSNVRLEVGEPDYKWRSADSK 144


>ref|XP_023728357.1| uncharacterized protein LOC111876065 isoform X2 [Lactuca sativa]
          Length = 349

 Score = 73.6 bits (179), Expect = 4e-12
 Identities = 48/115 (41%), Positives = 62/115 (53%), Gaps = 12/115 (10%)
 Frame = +2

Query: 11  IIVRCCSNSRKKSEDFPVTYILKRALKLKNDSAVTP--KEEK-LEVND---------DLS 154
           IIVRCCSNS + S + PV Y  K++LK    +  TP  KE K  EV           + S
Sbjct: 29  IIVRCCSNSDESSMNSPVRYTPKKSLKYNKVNDYTPAAKESKNFEVRRFTNPDSLYVEFS 88

Query: 155 NDKGKSRIGLFSDDKLVDYDFNSGNPRPIEKNIRKKNVRAEMGEREYEWRSAESK 319
           N   +S IG    +K +D DF  G+    EK     NVR E+GE +Y+WRSA+SK
Sbjct: 89  NAGERSSIGFSVHEKSLDNDFKEGHVISKEKKTYNSNVRLEVGEPDYKWRSADSK 143


>ref|XP_023728356.1| uncharacterized protein LOC111876065 isoform X1 [Lactuca sativa]
 gb|PLY78037.1| hypothetical protein LSAT_7X114860 [Lactuca sativa]
          Length = 350

 Score = 73.6 bits (179), Expect = 4e-12
 Identities = 48/115 (41%), Positives = 62/115 (53%), Gaps = 12/115 (10%)
 Frame = +2

Query: 11  IIVRCCSNSRKKSEDFPVTYILKRALKLKNDSAVTP--KEEK-LEVND---------DLS 154
           IIVRCCSNS + S + PV Y  K++LK    +  TP  KE K  EV           + S
Sbjct: 30  IIVRCCSNSDESSMNSPVRYTPKKSLKYNKVNDYTPAAKESKNFEVRRFTNPDSLYVEFS 89

Query: 155 NDKGKSRIGLFSDDKLVDYDFNSGNPRPIEKNIRKKNVRAEMGEREYEWRSAESK 319
           N   +S IG    +K +D DF  G+    EK     NVR E+GE +Y+WRSA+SK
Sbjct: 90  NAGERSSIGFSVHEKSLDNDFKEGHVISKEKKTYNSNVRLEVGEPDYKWRSADSK 144


>ref|XP_022012696.1| uncharacterized protein LOC110912314 [Helianthus annuus]
 gb|OTF95886.1| putative regulatory protein RecX family protein [Helianthus annuus]
          Length = 356

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 46/114 (40%), Positives = 56/114 (49%), Gaps = 10/114 (8%)
 Frame = +2

Query: 5   SKIIVRCCSNSRKKSEDFPVTYILKRALKLKNDSAVTP---KEEKLEV-----NDDLSN- 157
           +KIIVRCCSN       FPV Y  K++  L   +  TP     EKLE      NDD +  
Sbjct: 28  TKIIVRCCSN-------FPVRYTPKKSSSLNKPNDPTPVPSNSEKLEFKQFIENDDFNKN 80

Query: 158 -DKGKSRIGLFSDDKLVDYDFNSGNPRPIEKNIRKKNVRAEMGEREYEWRSAES 316
            D  +SRI    D K    DF SG+ R  EK      V++E  E  Y+WRS ES
Sbjct: 81  VDWPRSRIRSNLDKK--SPDFKSGDLRSKEKKNCNAAVQSEALEDSYKWRSVES 132


Top