BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum22_contig00033837
         (629 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_023763421.1| RNA-dependent RNA polymerase 6 [Lactuca sati...    52   4e-09
gb|KVH89612.1| RNA-dependent RNA polymerase, eukaryotic-type [Cy...    51   5e-08
ref|XP_022029697.1| RNA-dependent RNA polymerase 6-like [Heliant...    47   7e-08
gb|KVH99831.1| RNA-dependent RNA polymerase, eukaryotic-type [Cy...    44   6e-06
gb|KVH99780.1| RNA-dependent RNA polymerase, eukaryotic-type [Cy...    44   6e-06

>ref|XP_023763421.1| RNA-dependent RNA polymerase 6 [Lactuca sativa]
 gb|PLY85763.1| hypothetical protein LSAT_1X44761 [Lactuca sativa]
          Length = 1199

 Score = 51.6 bits (122), Expect(2) = 4e-09
 Identities = 22/31 (70%), Positives = 27/31 (87%)
 Frame = +3

Query: 66  ILPSNRSWPPMEYTASEAKKLPRDVRHTVIL 158
           I PS  SWPPMEYTA+EAK+LPRDV+H+ I+
Sbjct: 881 IPPSKTSWPPMEYTAAEAKQLPRDVKHSDII 911



 Score = 37.4 bits (85), Expect(2) = 4e-09
 Identities = 16/18 (88%), Positives = 17/18 (94%)
 Frame = +2

Query: 2   PGDVQVLKVVNVPGLEHL 55
           PGDV+VLK VNVPGLEHL
Sbjct: 827 PGDVRVLKAVNVPGLEHL 844


>gb|KVH89612.1| RNA-dependent RNA polymerase, eukaryotic-type [Cynara cardunculus
           var. scolymus]
          Length = 1182

 Score = 51.2 bits (121), Expect(2) = 5e-08
 Identities = 22/31 (70%), Positives = 27/31 (87%)
 Frame = +3

Query: 66  ILPSNRSWPPMEYTASEAKKLPRDVRHTVIL 158
           I PS +SWPPMEYTA+EAK LPRDV+H+ I+
Sbjct: 864 IPPSKQSWPPMEYTAAEAKLLPRDVKHSDII 894



 Score = 33.9 bits (76), Expect(2) = 5e-08
 Identities = 14/18 (77%), Positives = 17/18 (94%)
 Frame = +2

Query: 2   PGDVQVLKVVNVPGLEHL 55
           PGDV+VL+ V+VPGLEHL
Sbjct: 810 PGDVRVLEAVDVPGLEHL 827


>ref|XP_022029697.1| RNA-dependent RNA polymerase 6-like [Helianthus annuus]
 gb|OTG32623.1| putative RNA-dependent RNA polymerase 6 [Helianthus annuus]
          Length = 1201

 Score = 47.4 bits (111), Expect(2) = 7e-08
 Identities = 21/26 (80%), Positives = 23/26 (88%)
 Frame = +3

Query: 66  ILPSNRSWPPMEYTASEAKKLPRDVR 143
           I PS RSWPPMEYTA+EAK+L RDVR
Sbjct: 881 IPPSKRSWPPMEYTAAEAKELTRDVR 906



 Score = 37.4 bits (85), Expect(2) = 7e-08
 Identities = 16/18 (88%), Positives = 17/18 (94%)
 Frame = +2

Query: 2   PGDVQVLKVVNVPGLEHL 55
           PGDV+VLK VNVPGLEHL
Sbjct: 827 PGDVRVLKAVNVPGLEHL 844


>gb|KVH99831.1| RNA-dependent RNA polymerase, eukaryotic-type [Cynara cardunculus
            var. scolymus]
          Length = 1373

 Score = 44.3 bits (103), Expect(2) = 6e-06
 Identities = 19/24 (79%), Positives = 21/24 (87%)
 Frame = +3

Query: 66   ILPSNRSWPPMEYTASEAKKLPRD 137
            I PS +SWPPMEYTA+EAK LPRD
Sbjct: 1059 IPPSKQSWPPMEYTAAEAKLLPRD 1082



 Score = 33.9 bits (76), Expect(2) = 6e-06
 Identities = 14/18 (77%), Positives = 17/18 (94%)
 Frame = +2

Query: 2    PGDVQVLKVVNVPGLEHL 55
            PGDV+VL+ V+VPGLEHL
Sbjct: 1005 PGDVRVLEAVDVPGLEHL 1022


>gb|KVH99780.1| RNA-dependent RNA polymerase, eukaryotic-type [Cynara cardunculus
           var. scolymus]
          Length = 506

 Score = 44.3 bits (103), Expect(2) = 6e-06
 Identities = 19/24 (79%), Positives = 21/24 (87%)
 Frame = +3

Query: 66  ILPSNRSWPPMEYTASEAKKLPRD 137
           I PS +SWPPMEYTA+EAK LPRD
Sbjct: 192 IPPSKQSWPPMEYTAAEAKLLPRD 215



 Score = 33.9 bits (76), Expect(2) = 6e-06
 Identities = 14/18 (77%), Positives = 17/18 (94%)
 Frame = +2

Query: 2   PGDVQVLKVVNVPGLEHL 55
           PGDV+VL+ V+VPGLEHL
Sbjct: 138 PGDVRVLEAVDVPGLEHL 155