BLASTX nr result

ID: Chrysanthemum22_contig00033753 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum22_contig00033753
         (440 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|PLY98440.1| hypothetical protein LSAT_1X7101 [Lactuca sativa]       62   1e-08
ref|XP_023744274.1| uncharacterized protein LOC111892467 [Lactuc...    59   2e-07
ref|XP_023764543.1| uncharacterized protein LOC111913047 [Lactuc...    57   8e-07
ref|XP_021991776.1| mediator of RNA polymerase II transcription ...    55   6e-06

>gb|PLY98440.1| hypothetical protein LSAT_1X7101 [Lactuca sativa]
          Length = 346

 Score = 62.4 bits (150), Expect = 1e-08
 Identities = 38/99 (38%), Positives = 54/99 (54%), Gaps = 2/99 (2%)
 Frame = -2

Query: 430 DLFYLYCILAEGVYCNIPFWLADYL-RSASGVRLADRVYGGMLITRLARSLGILAGEVPS 254
           D+FYL+ I+  GV+CNIP+ LA YL   A   R   R+ GGM +TRLA S G++     +
Sbjct: 143 DVFYLWSIITPGVFCNIPWCLASYLSEGAVKDRKTSRINGGMFVTRLANSFGLMNRGAWN 202

Query: 253 FLNTMAAPRVVKAKSLKAMNVLMDYGRG-YAWFRSQPVI 140
           F+  +  P        +A  ++ DYG G YA     PV+
Sbjct: 203 FMTMIPTPPFNPILFRRA-RIIEDYGGGHYAIPNDDPVV 240


>ref|XP_023744274.1| uncharacterized protein LOC111892467 [Lactuca sativa]
          Length = 263

 Score = 58.9 bits (141), Expect = 2e-07
 Identities = 36/99 (36%), Positives = 53/99 (53%), Gaps = 2/99 (2%)
 Frame = -2

Query: 430 DLFYLYCILAEGVYCNIPFWLADYL-RSASGVRLADRVYGGMLITRLARSLGILAGEVPS 254
           D+FYL+ I+   V+CNIP+ +A YL   A   R   R+ GGM +TRLA S G++     +
Sbjct: 60  DVFYLWSIITPDVFCNIPWCIASYLSEGAVKDRKTSRINGGMFVTRLANSFGLMNRGAWN 119

Query: 253 FLNTMAAPRVVKAKSLKAMNVLMDYGRG-YAWFRSQPVI 140
           F+  +  P        +A  ++ DYG G YA     PV+
Sbjct: 120 FMTMIPTPPFNPILFRRA-RIIEDYGGGHYAIPNDDPVV 157


>ref|XP_023764543.1| uncharacterized protein LOC111913047 [Lactuca sativa]
          Length = 303

 Score = 57.4 bits (137), Expect = 8e-07
 Identities = 32/93 (34%), Positives = 47/93 (50%), Gaps = 1/93 (1%)
 Frame = -2

Query: 430 DLFYLYCILAEGVYCNIPFWLADYL-RSASGVRLADRVYGGMLITRLARSLGILAGEVPS 254
           D+FYL+ I+  GV+CNIP+ +A YL   A   R   R+ GGM +TRLA S G++     +
Sbjct: 221 DVFYLWSIITPGVFCNIPWCIASYLSEGAVKDRKTSRINGGMFVTRLANSFGLMNRGAWN 280

Query: 253 FLNTMAAPRVVKAKSLKAMNVLMDYGRGYAWFR 155
           F+  +  P                +G G+ W R
Sbjct: 281 FMTLIPTP---------------PHGSGWVWQR 298


>ref|XP_021991776.1| mediator of RNA polymerase II transcription subunit 12-like
           [Helianthus annuus]
          Length = 431

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 29/81 (35%), Positives = 44/81 (54%)
 Frame = -2

Query: 430 DLFYLYCILAEGVYCNIPFWLADYLRSASGVRLADRVYGGMLITRLARSLGILAGEVPSF 251
           DLF+LYC++   V CN+ + LA Y  S  G+R    + GG  IT+LA+S G+L  E    
Sbjct: 140 DLFFLYCLIKPAV-CNVAYMLASYFTSCMGMRPTTYICGGSYITQLAKSYGVLTPEACDN 198

Query: 250 LNTMAAPRVVKAKSLKAMNVL 188
           L +    + +   +L  M V+
Sbjct: 199 LTSFLPTQTLDMVALTYMKVV 219


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