BLASTX nr result

ID: Chrysanthemum22_contig00033577 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum22_contig00033577
         (569 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|PLY94880.1| hypothetical protein LSAT_2X101141 [Lactuca sativa]     97   8e-23

>gb|PLY94880.1| hypothetical protein LSAT_2X101141 [Lactuca sativa]
          Length = 86

 Score = 96.7 bits (239), Expect = 8e-23
 Identities = 53/86 (61%), Positives = 59/86 (68%), Gaps = 2/86 (2%)
 Frame = -2

Query: 493 MSCKPVPXXXXXXXXXXXXXXFGYEKHTFPRARFPLRRMM--ARSHLTSLSTDPSMHKGA 320
           M+CKP+               FGYE+HTFP  RF  RR++  A S LTSLSTDPS  KGA
Sbjct: 1   MTCKPLFFLFFLIFFHLLVMSFGYERHTFPTERFQPRRLLKTAASSLTSLSTDPSKLKGA 60

Query: 319 AMNELQTSVQDSLRKRPPSKSNPSHN 242
           AMNE QTSV+DSLRKRPPS SNPSHN
Sbjct: 61  AMNEPQTSVEDSLRKRPPSASNPSHN 86


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