BLASTX nr result

ID: Chrysanthemum22_contig00033576 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum22_contig00033576
         (465 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|PLY94880.1| hypothetical protein LSAT_2X101141 [Lactuca sativa]     66   2e-11

>gb|PLY94880.1| hypothetical protein LSAT_2X101141 [Lactuca sativa]
          Length = 86

 Score = 66.2 bits (160), Expect = 2e-11
 Identities = 40/79 (50%), Positives = 44/79 (55%), Gaps = 2/79 (2%)
 Frame = -1

Query: 381 MSCKPVPXXXXXXXXXXXXXXFGYEKHXXXXXXXXXXXXXAK--SHLTSLSTDPSMHKGA 208
           M+CKP+               FGYE+H                 S LTSLSTDPS  KGA
Sbjct: 1   MTCKPLFFLFFLIFFHLLVMSFGYERHTFPTERFQPRRLLKTAASSLTSLSTDPSKLKGA 60

Query: 207 AMNEPQTSVQDSLRKRPPS 151
           AMNEPQTSV+DSLRKRPPS
Sbjct: 61  AMNEPQTSVEDSLRKRPPS 79


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