BLASTX nr result

ID: Chrysanthemum22_contig00033496 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum22_contig00033496
         (434 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_022029140.1| arginine--tRNA ligase, chloroplastic/mitocho...    58   5e-07
ref|XP_022029139.1| arginine--tRNA ligase, cytoplasmic-like isof...    58   5e-07
ref|XP_023744249.1| arginine--tRNA ligase, chloroplastic/mitocho...    57   2e-06
ref|XP_023744248.1| arginine--tRNA ligase, cytoplasmic-like isof...    57   2e-06
ref|XP_022029136.1| arginine--tRNA ligase, cytoplasmic-like [Hel...    57   2e-06

>ref|XP_022029140.1| arginine--tRNA ligase, chloroplastic/mitochondrial-like isoform X2
           [Helianthus annuus]
          Length = 590

 Score = 58.2 bits (139), Expect = 5e-07
 Identities = 45/142 (31%), Positives = 74/142 (52%), Gaps = 21/142 (14%)
 Frame = -1

Query: 368 YVRFGLQRADWMVYLTPVWKQEYIEC-LTAAKLEERVKSNRHKPAKTSYAG--------- 219
           + R   ++A+W++Y+T V ++E+ E   TAAK    + ++ +K  KTS+ G         
Sbjct: 331 WYRLNEEKAEWIIYVTDVGQREHFEMFFTAAKRAGWLPTDENKHPKTSHVGFGLVLGDDG 390

Query: 218 --YRSCSTELED--KLLEKAKIHVVAEQAEDAKLLGYTP-------EAVLDCVLLYVFLK 72
             +R+ STE+     LL++AK    A   E  K   +TP       EAV    + Y  LK
Sbjct: 391 KRFRTRSTEVVKLVDLLDEAKTRCKAALVERGKAAEWTPEELEQTAEAVGYGAVKYADLK 450

Query: 71  HNRLDEFKFSIKDEILKEEGNT 6
           +NRL  + F+  D++L ++GNT
Sbjct: 451 NNRLTNYTFNF-DQMLNDKGNT 471


>ref|XP_022029139.1| arginine--tRNA ligase, cytoplasmic-like isoform X1 [Helianthus
           annuus]
 gb|OTG32101.1| putative arginyl-tRNA synthetase, class Ic [Helianthus annuus]
          Length = 640

 Score = 58.2 bits (139), Expect = 5e-07
 Identities = 45/142 (31%), Positives = 74/142 (52%), Gaps = 21/142 (14%)
 Frame = -1

Query: 368 YVRFGLQRADWMVYLTPVWKQEYIEC-LTAAKLEERVKSNRHKPAKTSYAG--------- 219
           + R   ++A+W++Y+T V ++E+ E   TAAK    + ++ +K  KTS+ G         
Sbjct: 381 WYRLNEEKAEWIIYVTDVGQREHFEMFFTAAKRAGWLPTDENKHPKTSHVGFGLVLGDDG 440

Query: 218 --YRSCSTELED--KLLEKAKIHVVAEQAEDAKLLGYTP-------EAVLDCVLLYVFLK 72
             +R+ STE+     LL++AK    A   E  K   +TP       EAV    + Y  LK
Sbjct: 441 KRFRTRSTEVVKLVDLLDEAKTRCKAALVERGKAAEWTPEELEQTAEAVGYGAVKYADLK 500

Query: 71  HNRLDEFKFSIKDEILKEEGNT 6
           +NRL  + F+  D++L ++GNT
Sbjct: 501 NNRLTNYTFNF-DQMLNDKGNT 521


>ref|XP_023744249.1| arginine--tRNA ligase, chloroplastic/mitochondrial-like isoform X2
           [Lactuca sativa]
          Length = 590

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 45/142 (31%), Positives = 74/142 (52%), Gaps = 21/142 (14%)
 Frame = -1

Query: 368 YVRFGLQRADWMVYLTPVWKQEYIEC-LTAAKLEERVKSNRHKPAKTSYAG--------- 219
           + R   ++A+W++Y+T V ++E+ E   TAAK    + ++ +K  KTS+ G         
Sbjct: 331 WYRLNEEKAEWIIYVTDVGQREHFEMFFTAAKRAGWLPNDENKYPKTSHVGFGLVLGDDG 390

Query: 218 --YRSCSTELED--KLLEKAKIHVVAEQAEDAKL-------LGYTPEAVLDCVLLYVFLK 72
             +R+ STE+     LL++AK    A   E  K        L +T EAV    + Y  LK
Sbjct: 391 KRFRTRSTEVVKLVDLLDEAKTRCKAALVERGKAAEWTAEELEHTAEAVGYGAVKYADLK 450

Query: 71  HNRLDEFKFSIKDEILKEEGNT 6
           +NRL  + F+  D++L ++GNT
Sbjct: 451 NNRLTNYTFNF-DQMLNDKGNT 471


>ref|XP_023744248.1| arginine--tRNA ligase, cytoplasmic-like isoform X1 [Lactuca sativa]
 gb|PLY65832.1| hypothetical protein LSAT_5X60361 [Lactuca sativa]
          Length = 643

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 45/142 (31%), Positives = 74/142 (52%), Gaps = 21/142 (14%)
 Frame = -1

Query: 368 YVRFGLQRADWMVYLTPVWKQEYIEC-LTAAKLEERVKSNRHKPAKTSYAG--------- 219
           + R   ++A+W++Y+T V ++E+ E   TAAK    + ++ +K  KTS+ G         
Sbjct: 384 WYRLNEEKAEWIIYVTDVGQREHFEMFFTAAKRAGWLPNDENKYPKTSHVGFGLVLGDDG 443

Query: 218 --YRSCSTELED--KLLEKAKIHVVAEQAEDAKL-------LGYTPEAVLDCVLLYVFLK 72
             +R+ STE+     LL++AK    A   E  K        L +T EAV    + Y  LK
Sbjct: 444 KRFRTRSTEVVKLVDLLDEAKTRCKAALVERGKAAEWTAEELEHTAEAVGYGAVKYADLK 503

Query: 71  HNRLDEFKFSIKDEILKEEGNT 6
           +NRL  + F+  D++L ++GNT
Sbjct: 504 NNRLTNYTFNF-DQMLNDKGNT 524


>ref|XP_022029136.1| arginine--tRNA ligase, cytoplasmic-like [Helianthus annuus]
 ref|XP_022029137.1| arginine--tRNA ligase, cytoplasmic-like [Helianthus annuus]
 ref|XP_022029138.1| arginine--tRNA ligase, cytoplasmic-like [Helianthus annuus]
 gb|OTG32102.1| putative arginine-tRNA ligase [Helianthus annuus]
          Length = 700

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 44/142 (30%), Positives = 74/142 (52%), Gaps = 21/142 (14%)
 Frame = -1

Query: 368 YVRFGLQRADWMVYLTPVWKQEYIEC-LTAAKLEERVKSNRHKPAKTSYAG--------- 219
           + R   ++A+W++YLT V ++E+ E    AAKL   + ++++K  KTS+ G         
Sbjct: 441 WYRLNEEKAEWIIYLTDVGQREHFEMFFAAAKLAGWLPTDKNKYPKTSHVGFGLVLGDDK 500

Query: 218 --YRSCSTELED--KLLEKAKIHVVAEQAEDAKLLGYTP-------EAVLDCVLLYVFLK 72
             +R+ STE+     LL++AK        E  K   +TP       EA+    + Y  LK
Sbjct: 501 KRFRTRSTEVVKLVDLLDEAKRRCKEALEERGKAAQWTPEELEQTSEAIGYGAVKYADLK 560

Query: 71  HNRLDEFKFSIKDEILKEEGNT 6
           +NRL  + F+  D++L ++GNT
Sbjct: 561 NNRLTNYTFNF-DQMLNDKGNT 581


Top