BLASTX nr result

ID: Chrysanthemum22_contig00033247 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum22_contig00033247
         (409 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|PLY81838.1| hypothetical protein LSAT_3X21901 [Lactuca sativa]      65   4e-11
gb|OTG20983.1| hypothetical protein HannXRQ_Chr07g0199171 [Helia...    65   5e-11
gb|KVH89835.1| hypothetical protein Ccrd_008178 [Cynara carduncu...    59   3e-07

>gb|PLY81838.1| hypothetical protein LSAT_3X21901 [Lactuca sativa]
          Length = 110

 Score = 65.5 bits (158), Expect = 4e-11
 Identities = 42/114 (36%), Positives = 50/114 (43%), Gaps = 2/114 (1%)
 Frame = -2

Query: 336 MAYHSSNTADLANLGKEAFDAIDTYFPHGRNSKHLSASTVIPQTRTPEPQQEFHYHRXXX 157
           M+Y+S    DL  +G E F  +D + P G+NSK  SAS     T  P       Y     
Sbjct: 1   MSYYSKAKTDLKKIGAEGFSLLDDHCPRGQNSKRSSASAAAAATAPP-------YRTQPQ 53

Query: 156 XXXXXXXXXXYHSAPVATMRTEKVIKYNDAAKMYGGTLYVDYPK--RKPARKGF 1
                      +    A   TE VI    AA MYGGTL VDYPK  RKP   G+
Sbjct: 54  MFPCQYKPQQTYFVQQAPPETEMVIDSYQAANMYGGTLLVDYPKTNRKPIHNGW 107


>gb|OTG20983.1| hypothetical protein HannXRQ_Chr07g0199171 [Helianthus annuus]
          Length = 105

 Score = 65.1 bits (157), Expect = 5e-11
 Identities = 44/110 (40%), Positives = 60/110 (54%), Gaps = 2/110 (1%)
 Frame = -2

Query: 336 MAYHSSNTADLANLGKEAFDAIDTYFPHGR--NSKHLSASTVIPQTRTPEPQQEFHYHRX 163
           MA+   N  DLA +GKEAFD ID+    GR  + +H+S     PQ        + +  R 
Sbjct: 1   MAHTYKNKTDLATIGKEAFDVIDS---RGRQYSKQHVSHYQYQPQ--------QAYVVRE 49

Query: 162 XXXXXXXXXXXXYHSAPVATMRTEKVIKYNDAAKMYGGTLYVDYPKRKPA 13
                        ++APV+    ++VI  +DAAKMYGGTL+V+YPKRKPA
Sbjct: 50  QVYAAPYVVQQQVYAAPVS----KRVITCDDAAKMYGGTLFVEYPKRKPA 95


>gb|KVH89835.1| hypothetical protein Ccrd_008178 [Cynara cardunculus var. scolymus]
          Length = 419

 Score = 58.5 bits (140), Expect = 3e-07
 Identities = 45/120 (37%), Positives = 56/120 (46%), Gaps = 3/120 (2%)
 Frame = -2

Query: 354 YSFTQKMAYHSSNTA-DLANLGKEAFDAIDTYFPHGRNSKHLS--ASTVIPQTRTPEPQQ 184
           Y  T KM+YH S +  +LA +G +AF  +D  F  G  SK     +    P  RTP    
Sbjct: 291 YGGTFKMSYHDSKSKPNLAKIGADAFALLDD-FSGGNKSKPKPWLSKVSAPPRRTPNKL- 348

Query: 183 EFHYHRXXXXXXXXXXXXXYHSAPVATMRTEKVIKYNDAAKMYGGTLYVDYPKRKPARKG 4
              +H               + APV  M    V  Y  A K YGGT+ +DYPKRKPARKG
Sbjct: 349 ---FHDLYQPKNASVIQEEVYDAPVEEMIKTAVDCYK-ADKRYGGTVTLDYPKRKPARKG 404


Top