BLASTX nr result

ID: Chrysanthemum22_contig00033176 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum22_contig00033176
         (387 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|OTG05826.1| putative serine/threonine-protein kinase, active ...    60   5e-08
gb|ABA97658.1| retrotransposon protein, putative, Ty1-copia subc...    57   1e-06
gb|OTG33036.1| putative ribonuclease H-like domain-containing pr...    55   3e-06

>gb|OTG05826.1| putative serine/threonine-protein kinase, active site protein
            [Helianthus annuus]
          Length = 1471

 Score = 60.5 bits (145), Expect = 5e-08
 Identities = 22/46 (47%), Positives = 34/46 (73%)
 Frame = +3

Query: 249  SIHPMVTRYRVGTNRPTERLNMHVSSVSPLPKTYRDASTDPNWQNA 386
            ++HPM TR + G+++P  +LN+H +++SP+P TY  A TDPNW  A
Sbjct: 1092 NLHPMATRSKTGSSKPAHKLNLHTTTISPIPSTYGKAFTDPNWVQA 1137


>gb|ABA97658.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1597

 Score = 56.6 bits (135), Expect = 1e-06
 Identities = 22/47 (46%), Positives = 33/47 (70%)
 Frame = +3

Query: 246  VSIHPMVTRYRVGTNRPTERLNMHVSSVSPLPKTYRDASTDPNWQNA 386
            ++ H M TR + G  +P +RLN+H S++SP+P+TYR A  DP W+ A
Sbjct: 1052 INDHTMTTRGKAGVRKPVQRLNLHASTLSPVPRTYRAALADPYWRTA 1098


>gb|OTG33036.1| putative ribonuclease H-like domain-containing protein [Helianthus
            annuus]
          Length = 1430

 Score = 55.5 bits (132), Expect = 3e-06
 Identities = 28/76 (36%), Positives = 39/76 (51%), Gaps = 3/76 (3%)
 Frame = +3

Query: 168  QHTPNTSPPAXXXXXXXXXXXXXXXXVSIHPMVTRYRVGTNRPTERLNMHVSS---VSPL 338
            QH+ + S P+                 S HPM TR + G  +P   LN+H ++   VSPL
Sbjct: 867  QHSNHNSHPSSSDQNHPLNQTVQPQPTSSHPMTTRLKAGITKPKIHLNLHATTSPTVSPL 926

Query: 339  PKTYRDASTDPNWQNA 386
            PK++ DA +DPNW  A
Sbjct: 927  PKSHIDAQSDPNWHMA 942


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