BLASTX nr result

ID: Chrysanthemum22_contig00033064 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum22_contig00033064
         (608 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KVI00753.1| Arginine repressor C-terminal-like domain-contain...    62   2e-07
ref|XP_021977342.1| DNA topoisomerase 2-like [Helianthus annuus]...    62   2e-07
ref|XP_023759895.1| DNA topoisomerase 2 [Lactuca sativa]               58   2e-06
gb|PLY88472.1| hypothetical protein LSAT_1X105720 [Lactuca sativa]     58   2e-06
ref|XP_022005320.1| DNA topoisomerase 2-like [Helianthus annuus]...    57   6e-06

>gb|KVI00753.1| Arginine repressor C-terminal-like domain-containing protein
           [Cynara cardunculus var. scolymus]
          Length = 1484

 Score = 61.6 bits (148), Expect = 2e-07
 Identities = 31/68 (45%), Positives = 44/68 (64%)
 Frame = +3

Query: 291 TIVR*DANVMWYHVFNYYPNVAKFAIECPEDDNNDLKKRCVIELAACMGNSVKAELDGTH 470
           TI +  +   W  V ++ P+++KF +EC EDD   L K+ V++LA C+G SVK ELDG  
Sbjct: 205 TITKCKSGENWTMV-SFKPDLSKFGMECLEDDVVALMKKRVVDLAGCLGKSVKVELDGKR 263

Query: 471 FSPKTFKD 494
             PKTF+D
Sbjct: 264 VPPKTFED 271


>ref|XP_021977342.1| DNA topoisomerase 2-like [Helianthus annuus]
 gb|OTG37224.1| putative topoisomerase II [Helianthus annuus]
          Length = 1499

 Score = 61.6 bits (148), Expect = 2e-07
 Identities = 33/75 (44%), Positives = 48/75 (64%)
 Frame = +3

Query: 270 K*LEYSITIVR*DANVMWYHVFNYYPNVAKFAIECPEDDNNDLKKRCVIELAACMGNSVK 449
           K LE +IT  +   N   + + ++ P+++KF +EC EDD   L K+ V++LA C+G SVK
Sbjct: 200 KKLEPTITKCKNSEN---WTMVSFKPDLSKFGMECLEDDVVALMKKRVVDLAGCLGKSVK 256

Query: 450 AELDGTHFSPKTFKD 494
            ELDG    PKTF+D
Sbjct: 257 VELDGKRVPPKTFED 271


>ref|XP_023759895.1| DNA topoisomerase 2 [Lactuca sativa]
          Length = 1508

 Score = 58.2 bits (139), Expect = 2e-06
 Identities = 30/68 (44%), Positives = 42/68 (61%)
 Frame = +3

Query: 291 TIVR*DANVMWYHVFNYYPNVAKFAIECPEDDNNDLKKRCVIELAACMGNSVKAELDGTH 470
           TI +  +   W  V ++ P++ KF +EC E D   L K+ V++LA C+G SVK ELDG  
Sbjct: 206 TITKCKSGENWTMV-SFKPDLTKFGMECLEADVVALMKKRVVDLAGCLGKSVKVELDGKR 264

Query: 471 FSPKTFKD 494
             PKTF+D
Sbjct: 265 VPPKTFED 272


>gb|PLY88472.1| hypothetical protein LSAT_1X105720 [Lactuca sativa]
          Length = 1508

 Score = 58.2 bits (139), Expect = 2e-06
 Identities = 30/68 (44%), Positives = 42/68 (61%)
 Frame = +3

Query: 291 TIVR*DANVMWYHVFNYYPNVAKFAIECPEDDNNDLKKRCVIELAACMGNSVKAELDGTH 470
           TI +  +   W  V ++ P++ KF +EC E D   L K+ V++LA C+G SVK ELDG  
Sbjct: 206 TITKCKSGENWTMV-SFKPDLTKFGMECLEADVVALMKKRVVDLAGCLGKSVKVELDGKR 264

Query: 471 FSPKTFKD 494
             PKTF+D
Sbjct: 265 VPPKTFED 272


>ref|XP_022005320.1| DNA topoisomerase 2-like [Helianthus annuus]
 gb|OTF98638.1| putative DNA topoisomerase 2 [Helianthus annuus]
          Length = 1488

 Score = 57.0 bits (136), Expect = 6e-06
 Identities = 25/53 (47%), Positives = 37/53 (69%)
 Frame = +3

Query: 336 NYYPNVAKFAIECPEDDNNDLKKRCVIELAACMGNSVKAELDGTHFSPKTFKD 494
           ++ P++ KF +EC EDD   L K+ V++LA C+G +VK EL+G    PKTF+D
Sbjct: 206 SFKPDLKKFGMECLEDDVVALMKKRVVDLAGCLGKTVKVELNGKRVPPKTFED 258


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