BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum22_contig00032094
         (473 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KVI04323.1| Helicase, C-terminal [Cynara cardunculus var. sco...    56   4e-06

>gb|KVI04323.1| Helicase, C-terminal [Cynara cardunculus var. scolymus]
          Length = 2874

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 54/177 (30%), Positives = 73/177 (41%), Gaps = 21/177 (11%)
 Frame = -2

Query: 469  MDTSLGGSEHEKQELSRSDALGGIEKVISNEEKSTVETTLGGIEKVTDSQEKSTVETTTV 290
            +DT++  SE  + E  + DA GGI++  + EE                       +TT  
Sbjct: 2527 VDTNVKPSEMGESENEKQDASGGIKENATEEE-----------------------QTTIA 2563

Query: 289  LPAGLEEHEDG-NTDRGTPIETDEKSPEKMQD-------ARXXXXXXXXXXXSIEKDV-N 137
            LP  L + ED  NTD G  +E D++S EKM D                     IEKDV  
Sbjct: 2564 LPVILGDREDDKNTDGGPLVEIDKESSEKMDDVLMGETEVNTSEVGGEDGAGGIEKDVTE 2623

Query: 136  VG------------EQSTKELPAAKEETEVSETIDSAMLVETEAKPFKEDSDGVHGE 2
            VG             +  +  PAA+EE E SETIDS           K+++D  HGE
Sbjct: 2624 VGGEDGAGGIEKDVTEDDQSFPAAQEEIEASETIDS-----------KKENDDTHGE 2669