BLASTX nr result

ID: Chrysanthemum22_contig00032000 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum22_contig00032000
         (550 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KVH96359.1| hypothetical protein Ccrd_001565 [Cynara carduncu...    62   2e-08
ref|XP_006371673.1| hypothetical protein POPTR_0019s15010g [Popu...    56   1e-06

>gb|KVH96359.1| hypothetical protein Ccrd_001565 [Cynara cardunculus var. scolymus]
          Length = 216

 Score = 62.0 bits (149), Expect = 2e-08
 Identities = 39/99 (39%), Positives = 52/99 (52%)
 Frame = +3

Query: 201 SPKGGEIHLGASFECSPSYPQRSHTRGYHHLHCCWSSNTQTPLE*RENIANGERYAPKQ* 380
           S K  EI    SF+C+P Y  R  T  +HHLH    S TQTP +  E  A+G        
Sbjct: 119 STKAREIPFRVSFKCTPRYHHRRFTGRFHHLHRRSCSATQTPPQAPEKSADGGETT---- 174

Query: 381 FNDVEDAPKQGSNAVEDAHKQVLNRGEDAHKQAATSGDK 497
           F +VE+A KQ S+  ++A K+    G + HK AA +G K
Sbjct: 175 FENVENALKQESDNRKNAPKRESENGGEGHKHAAANGAK 213


>ref|XP_006371673.1| hypothetical protein POPTR_0019s15010g [Populus trichocarpa]
 gb|PNS22738.1| hypothetical protein POPTR_T119900v3 [Populus trichocarpa]
          Length = 158

 Score = 56.2 bits (134), Expect = 1e-06
 Identities = 44/117 (37%), Positives = 58/117 (49%), Gaps = 2/117 (1%)
 Frame = -3

Query: 548 AVVVILGICCFICLFSCLVS-TCSCLFMCIFSTIQYLFMCIFYSVRSLFGCIFYIVKSLF 372
           AVVVI+ + C  C   CLV   CSC   C+  +++    C+ +SVRS  GC+   V+S  
Sbjct: 64  AVVVIVLLFCSCC--GCLVKIVCSCCG-CLARSVRSCCGCLAWSVRSCCGCLARSVRS-- 118

Query: 371 GCISFTVCYIFSLLKGCLCVGGPAT-VKMMVAPGMAPLRIARAAFEASPQVYFATLR 204
                             C GG AT VK M+APG    R+ R+ FEA+P  YF  LR
Sbjct: 119 ------------------CCGGAATSVKTMIAPG-RDYRMPRSIFEANPSGYFRDLR 156


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