BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum22_contig00031915
         (3961 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_022012121.1| DNA-directed RNA polymerase V subunit 1-like...  1988   0.0  
gb|OTF95291.1| putative nuclear RNA polymerase D1B [Helianthus a...  1988   0.0  
ref|XP_023733016.1| DNA-directed RNA polymerase V subunit 1 [Lac...  1893   0.0  
gb|PLY74549.1| hypothetical protein LSAT_7X31901 [Lactuca sativa]    1893   0.0  
ref|XP_021981591.1| LOW QUALITY PROTEIN: DNA-directed RNA polyme...  1867   0.0  
gb|OTG37776.1| putative DNA-directed RNA polymerase, subunit bet...  1816   0.0  
ref|XP_022866101.1| DNA-directed RNA polymerase V subunit 1 [Ole...  1537   0.0  
ref|XP_018849434.1| PREDICTED: DNA-directed RNA polymerase V sub...  1537   0.0  
ref|XP_018849433.1| PREDICTED: DNA-directed RNA polymerase V sub...  1537   0.0  
gb|PIN04981.1| RNA polymerase II, large subunit [Handroanthus im...  1536   0.0  
ref|XP_020554889.1| DNA-directed RNA polymerase V subunit 1 [Ses...  1536   0.0  
ref|XP_019066486.1| PREDICTED: DNA-directed RNA polymerase V sub...  1533   0.0  
ref|XP_015056787.1| PREDICTED: DNA-directed RNA polymerase V sub...  1532   0.0  
ref|XP_002265533.1| PREDICTED: DNA-directed RNA polymerase V sub...  1529   0.0  
emb|CBI40152.3| unnamed protein product, partial [Vitis vinifera]    1525   0.0  
gb|PHT40964.1| DNA-directed RNA polymerase V subunit 1 [Capsicum...  1522   0.0  
gb|PHU09752.1| DNA-directed RNA polymerase V subunit 1 [Capsicum...  1519   0.0  
gb|PHT74769.1| DNA-directed RNA polymerase V subunit 1 [Capsicum...  1519   0.0  
ref|XP_016557263.1| PREDICTED: DNA-directed RNA polymerase V sub...  1518   0.0  
ref|XP_017257953.1| PREDICTED: DNA-directed RNA polymerase V sub...  1516   0.0  

>ref|XP_022012121.1| DNA-directed RNA polymerase V subunit 1-like [Helianthus annuus]
          Length = 2083

 Score = 1988 bits (5150), Expect = 0.0
 Identities = 1020/1340 (76%), Positives = 1114/1340 (83%), Gaps = 20/1340 (1%)
 Frame = +1

Query: 1    CLKFKSKRPQAKSIGVLERAFTACCEDAAQVTVNEAKTADGACYLELKVPSRSR-RDGIW 177
            CLKFK+KR Q+K+ GVLERAF  CCE++AQVTV+E +  DGAC+LELK+PSR+R  D  W
Sbjct: 101  CLKFKNKRLQSKNAGVLERAFAFCCEESAQVTVHENQKKDGACFLELKLPSRTRVSDRFW 160

Query: 178  DFLDRYGYHYG-DGIARPLLPSEVLIILKKIPDATKKKLAGRGCFFQEGYIMQHLPVPPN 354
            DFLDRYGY YG DG  RPLLPSEVL ILKKIP+ATKKKLAGRGCFFQEGYIMQHLPVPPN
Sbjct: 161  DFLDRYGYRYGGDGTTRPLLPSEVLKILKKIPEATKKKLAGRGCFFQEGYIMQHLPVPPN 220

Query: 355  CLSTPDVSDGISVMSSDISMTMLKKVLRQVEIIKSSRSGHPNFESLEVEVNDLQAAVAQY 534
            CLSTPDVSDGI+V SSDISM MLKKVLRQVEIIKSSRSG PNFESLEVEVNDLQ AVAQY
Sbjct: 221  CLSTPDVSDGITVTSSDISMPMLKKVLRQVEIIKSSRSGTPNFESLEVEVNDLQLAVAQY 280

Query: 535  LQSRGAKTSPDRNTRYGIAKEQTESSSTKAWLEKMKTLFISKGSGFSSRSVITGDPYKGV 714
            LQSRGAK SPDRNTRY IA+  T+SSSTKAWLEKMKTLFISKGSGFSSRSVITGDPYKGV
Sbjct: 281  LQSRGAKASPDRNTRYAIARTATDSSSTKAWLEKMKTLFISKGSGFSSRSVITGDPYKGV 340

Query: 715  GEIGIPFEIAQRITFEERVTEYNMKSLQKLVDDKLCLTYRDGQSTYSLREGSKGHTFLKP 894
            GEIGIPFEIAQRITFEERVTE+NMK LQKLVDDKLCLTY DG +TYSLREGSKGHTFLKP
Sbjct: 341  GEIGIPFEIAQRITFEERVTEHNMKFLQKLVDDKLCLTYIDGHTTYSLREGSKGHTFLKP 400

Query: 895  GQVVHRKIMEGDVIFINRPPTTHKHSLQALSVYIHEDHTFKINPLICGPLSADFDGDCIH 1074
            GQVVHRKIM+GD+IFINRPPTTHKHSLQALSVYIH+DHTFKINPLICGPLSADFDGDCIH
Sbjct: 401  GQVVHRKIMDGDLIFINRPPTTHKHSLQALSVYIHDDHTFKINPLICGPLSADFDGDCIH 460

Query: 1075 IFYPQSPDAKAEVLELFAVEKQLLSSHSGHVNLQLGTDSVLSXXXXXXXXXXXXAEVQQX 1254
            IFYPQSP+AKAEV+ELFAVEKQLLSSHSG+VNLQLGTDSVLS            A+VQQ 
Sbjct: 461  IFYPQSPEAKAEVMELFAVEKQLLSSHSGNVNLQLGTDSVLSLKTMFKKYFFTKAQVQQL 520

Query: 1255 XXXXXXXXXXXXXXXVRDSGPVWTVLELLETSLPRGFDCNGDKFVIRDSKILKLDYSRDX 1434
                             DSGP+WTVLELLETSLPRGFDC  DKFVI+DSKILKLDYSRD 
Sbjct: 521  ALYTSNPLPKPSMLKACDSGPLWTVLELLETSLPRGFDCLSDKFVIKDSKILKLDYSRDA 580

Query: 1435 XXXXXXXXXXXXFFTKGPNEVLKLFNSLQPLLMENLSKEGFNISLEDFIIPKPXXXXXXX 1614
                        FF+KGPNEVLKLFNSLQP+LMENL  EGFN+SLEDFIIPK        
Sbjct: 581  MQSIVNEIISSIFFSKGPNEVLKLFNSLQPMLMENLCDEGFNLSLEDFIIPKDLVREIED 640

Query: 1615 XXXXXXXXXRHLRKNYNEVIALQVDKRLRLVKNPISDFILRYSSMGNLIDVKSDSAVTKI 1794
                      HLR NYNEVI +Q++K LR  K P+S+FILR+SSMG+LID KSDSA+T+I
Sbjct: 641  QLQELSSLLYHLRSNYNEVIDMQLEKHLRACKTPVSEFILRFSSMGDLIDPKSDSALTRI 700

Query: 1795 VQQIGFLGLQILEKGRLYSKTLAEDLSIHFLGNYPFPDDYPYEEFGLVRNGLFHGLDPYQ 1974
            VQQIGFLGLQI E+GRLYS+TLAEDLS HF+GNYPFP  YPYEEFGL+R+GLFHGLDPYQ
Sbjct: 701  VQQIGFLGLQIYERGRLYSRTLAEDLSSHFVGNYPFPKKYPYEEFGLIRSGLFHGLDPYQ 760

Query: 1975 EMVHSICNREQMVRSSRGLTEPGTLFKNSMAILRDVVICYDGTVRNVCSNSIIQFEYGGV 2154
            EMVHSI +RE M+RSSRGLTEPG LFKNSMAILRDVVICYDGTVRNVCSNSIIQFEYG +
Sbjct: 761  EMVHSIASREVMIRSSRGLTEPGILFKNSMAILRDVVICYDGTVRNVCSNSIIQFEYGAL 820

Query: 2155 THNFFAAGEPVGVLAATAMSNPAYKAVLDSSPNSNSSWDMMKEILFCGVNFKNVHNDRRV 2334
            T N FAAGEPVGVLAATAMSNPAYKAVLDSSP+SN+SW+MMKEIL CGVNFKNV NDRRV
Sbjct: 821  TKNLFAAGEPVGVLAATAMSNPAYKAVLDSSPSSNNSWNMMKEILQCGVNFKNVLNDRRV 880

Query: 2335 VLYLNACDCGAKYCLENAAYLVKNHLRKVSLKDVALEFLIEYDRKQVAVDNA-IDAGLVG 2511
            VLYLN CDCG +YC E AAY VKNHLR+VSLKDVA+EFLIEY  +QV +D+   DAGLVG
Sbjct: 881  VLYLNDCDCGEEYCREKAAYKVKNHLRRVSLKDVAVEFLIEY--QQVTLDSTETDAGLVG 938

Query: 2512 HVHLNKALLEESKISMEEILTKCEESLNSFRKKKKVGQLFKKIALDCSECSFNQSSKSNW 2691
            HVHLNK LLEES ISMEE+LTKCE++LNSFRKKKKVGQLFKKIA+ CSECSF Q+SK  W
Sbjct: 939  HVHLNKKLLEESNISMEEVLTKCEDTLNSFRKKKKVGQLFKKIAISCSECSFQQASK--W 996

Query: 2692 TPCLKFFWQDTPDIHLEKTAHIFADAVCPVLLNAIIKGDPRVKEANITWISPETTGWIGN 2871
            TPCLKFFW+D PDIHLEKTAHIFA+AVCPVLLN+IIKGDPRVKEANITWISPETT WI N
Sbjct: 997  TPCLKFFWEDRPDIHLEKTAHIFANAVCPVLLNSIIKGDPRVKEANITWISPETTVWIKN 1056

Query: 2872 PSKEQKGELAINVVLEKEAVKKNGDAWRTVMDSCLPIIHLIDTTRSIPYAIKQVENLLGI 3051
            P K+QKG+LAI+VVLEKEAVKKNGDAWRTVMD+CLP++HLIDTTRSIPYAIKQVE+LLGI
Sbjct: 1057 PKKDQKGDLAIDVVLEKEAVKKNGDAWRTVMDACLPVLHLIDTTRSIPYAIKQVEHLLGI 1116

Query: 3052 ACTFEQAIQRLSTSVSMVTKGMLKEHLLLLASSMTCAGILVGFNQAGIKALSKALNFQAP 3231
            AC FEQA+QRLSTSVSMVTKGMLKEHLLLLASSMTCAG LVGFN AGIKAL+K LNFQ P
Sbjct: 1117 ACAFEQAVQRLSTSVSMVTKGMLKEHLLLLASSMTCAGFLVGFNVAGIKALNKTLNFQVP 1176

Query: 3232 FSEATVYTPKKCFEKAAEKCHADSLSSIVGACSWGKPVAVGTGSRFDILWDTREVELNQK 3411
            FSEATVYTPK+CFEKAAEKCHADSLSSIVGACSWGKPVAVGTGSRFDILWDTREVELNQK
Sbjct: 1177 FSEATVYTPKRCFEKAAEKCHADSLSSIVGACSWGKPVAVGTGSRFDILWDTREVELNQK 1236

Query: 3412 DGIDVYNFLNLVRGVSEEEADNECLGGDLDYYELEDNYMEAGSPELESGSAKPVFEDGLD 3591
            DGIDVYNFL++V G S EEAD+ CLGG++D +++E   ME GSPE++SG AKPVFEDGL+
Sbjct: 1237 DGIDVYNFLHMVGGGS-EEADSGCLGGEVDSFDME--IMETGSPEIDSGLAKPVFEDGLN 1293

Query: 3592 LNIDEMDVDRTGGKSTWESGPAPEDXXXXXXXXXXXXXXXXXXXXXXXSDKDLQET-GSW 3768
            L++    V+ +G    W +GP PED                       + K+   T G W
Sbjct: 1294 LDV---GVEPSG----WGTGPVPEDGTSSGGWGAAIKTTPTTGGGWGDAMKNTPTTGGGW 1346

Query: 3769 G-------------GWGANKSQEDVVPSEPWGK--KNDDSAAGGGWGTKNSDTNTEKGS- 3900
            G             GWGA KSQ DV PS  WG   K DD+ +  GWG K SD  TEK S 
Sbjct: 1347 GEAKSDQGQQIGSSGWGATKSQNDVEPSGSWGSLGKKDDNQS--GWGAK-SDNQTEKDSG 1403

Query: 3901 SWGHKAAKADETGWGSNNPQ 3960
             WGHK +K DE  WG+   Q
Sbjct: 1404 GWGHKVSKGDEHAWGAKKSQ 1423


>gb|OTF95291.1| putative nuclear RNA polymerase D1B [Helianthus annuus]
          Length = 2146

 Score = 1988 bits (5150), Expect = 0.0
 Identities = 1020/1340 (76%), Positives = 1114/1340 (83%), Gaps = 20/1340 (1%)
 Frame = +1

Query: 1    CLKFKSKRPQAKSIGVLERAFTACCEDAAQVTVNEAKTADGACYLELKVPSRSR-RDGIW 177
            CLKFK+KR Q+K+ GVLERAF  CCE++AQVTV+E +  DGAC+LELK+PSR+R  D  W
Sbjct: 164  CLKFKNKRLQSKNAGVLERAFAFCCEESAQVTVHENQKKDGACFLELKLPSRTRVSDRFW 223

Query: 178  DFLDRYGYHYG-DGIARPLLPSEVLIILKKIPDATKKKLAGRGCFFQEGYIMQHLPVPPN 354
            DFLDRYGY YG DG  RPLLPSEVL ILKKIP+ATKKKLAGRGCFFQEGYIMQHLPVPPN
Sbjct: 224  DFLDRYGYRYGGDGTTRPLLPSEVLKILKKIPEATKKKLAGRGCFFQEGYIMQHLPVPPN 283

Query: 355  CLSTPDVSDGISVMSSDISMTMLKKVLRQVEIIKSSRSGHPNFESLEVEVNDLQAAVAQY 534
            CLSTPDVSDGI+V SSDISM MLKKVLRQVEIIKSSRSG PNFESLEVEVNDLQ AVAQY
Sbjct: 284  CLSTPDVSDGITVTSSDISMPMLKKVLRQVEIIKSSRSGTPNFESLEVEVNDLQLAVAQY 343

Query: 535  LQSRGAKTSPDRNTRYGIAKEQTESSSTKAWLEKMKTLFISKGSGFSSRSVITGDPYKGV 714
            LQSRGAK SPDRNTRY IA+  T+SSSTKAWLEKMKTLFISKGSGFSSRSVITGDPYKGV
Sbjct: 344  LQSRGAKASPDRNTRYAIARTATDSSSTKAWLEKMKTLFISKGSGFSSRSVITGDPYKGV 403

Query: 715  GEIGIPFEIAQRITFEERVTEYNMKSLQKLVDDKLCLTYRDGQSTYSLREGSKGHTFLKP 894
            GEIGIPFEIAQRITFEERVTE+NMK LQKLVDDKLCLTY DG +TYSLREGSKGHTFLKP
Sbjct: 404  GEIGIPFEIAQRITFEERVTEHNMKFLQKLVDDKLCLTYIDGHTTYSLREGSKGHTFLKP 463

Query: 895  GQVVHRKIMEGDVIFINRPPTTHKHSLQALSVYIHEDHTFKINPLICGPLSADFDGDCIH 1074
            GQVVHRKIM+GD+IFINRPPTTHKHSLQALSVYIH+DHTFKINPLICGPLSADFDGDCIH
Sbjct: 464  GQVVHRKIMDGDLIFINRPPTTHKHSLQALSVYIHDDHTFKINPLICGPLSADFDGDCIH 523

Query: 1075 IFYPQSPDAKAEVLELFAVEKQLLSSHSGHVNLQLGTDSVLSXXXXXXXXXXXXAEVQQX 1254
            IFYPQSP+AKAEV+ELFAVEKQLLSSHSG+VNLQLGTDSVLS            A+VQQ 
Sbjct: 524  IFYPQSPEAKAEVMELFAVEKQLLSSHSGNVNLQLGTDSVLSLKTMFKKYFFTKAQVQQL 583

Query: 1255 XXXXXXXXXXXXXXXVRDSGPVWTVLELLETSLPRGFDCNGDKFVIRDSKILKLDYSRDX 1434
                             DSGP+WTVLELLETSLPRGFDC  DKFVI+DSKILKLDYSRD 
Sbjct: 584  ALYTSNPLPKPSMLKACDSGPLWTVLELLETSLPRGFDCLSDKFVIKDSKILKLDYSRDA 643

Query: 1435 XXXXXXXXXXXXFFTKGPNEVLKLFNSLQPLLMENLSKEGFNISLEDFIIPKPXXXXXXX 1614
                        FF+KGPNEVLKLFNSLQP+LMENL  EGFN+SLEDFIIPK        
Sbjct: 644  MQSIVNEIISSIFFSKGPNEVLKLFNSLQPMLMENLCDEGFNLSLEDFIIPKDLVREIED 703

Query: 1615 XXXXXXXXXRHLRKNYNEVIALQVDKRLRLVKNPISDFILRYSSMGNLIDVKSDSAVTKI 1794
                      HLR NYNEVI +Q++K LR  K P+S+FILR+SSMG+LID KSDSA+T+I
Sbjct: 704  QLQELSSLLYHLRSNYNEVIDMQLEKHLRACKTPVSEFILRFSSMGDLIDPKSDSALTRI 763

Query: 1795 VQQIGFLGLQILEKGRLYSKTLAEDLSIHFLGNYPFPDDYPYEEFGLVRNGLFHGLDPYQ 1974
            VQQIGFLGLQI E+GRLYS+TLAEDLS HF+GNYPFP  YPYEEFGL+R+GLFHGLDPYQ
Sbjct: 764  VQQIGFLGLQIYERGRLYSRTLAEDLSSHFVGNYPFPKKYPYEEFGLIRSGLFHGLDPYQ 823

Query: 1975 EMVHSICNREQMVRSSRGLTEPGTLFKNSMAILRDVVICYDGTVRNVCSNSIIQFEYGGV 2154
            EMVHSI +RE M+RSSRGLTEPG LFKNSMAILRDVVICYDGTVRNVCSNSIIQFEYG +
Sbjct: 824  EMVHSIASREVMIRSSRGLTEPGILFKNSMAILRDVVICYDGTVRNVCSNSIIQFEYGAL 883

Query: 2155 THNFFAAGEPVGVLAATAMSNPAYKAVLDSSPNSNSSWDMMKEILFCGVNFKNVHNDRRV 2334
            T N FAAGEPVGVLAATAMSNPAYKAVLDSSP+SN+SW+MMKEIL CGVNFKNV NDRRV
Sbjct: 884  TKNLFAAGEPVGVLAATAMSNPAYKAVLDSSPSSNNSWNMMKEILQCGVNFKNVLNDRRV 943

Query: 2335 VLYLNACDCGAKYCLENAAYLVKNHLRKVSLKDVALEFLIEYDRKQVAVDNA-IDAGLVG 2511
            VLYLN CDCG +YC E AAY VKNHLR+VSLKDVA+EFLIEY  +QV +D+   DAGLVG
Sbjct: 944  VLYLNDCDCGEEYCREKAAYKVKNHLRRVSLKDVAVEFLIEY--QQVTLDSTETDAGLVG 1001

Query: 2512 HVHLNKALLEESKISMEEILTKCEESLNSFRKKKKVGQLFKKIALDCSECSFNQSSKSNW 2691
            HVHLNK LLEES ISMEE+LTKCE++LNSFRKKKKVGQLFKKIA+ CSECSF Q+SK  W
Sbjct: 1002 HVHLNKKLLEESNISMEEVLTKCEDTLNSFRKKKKVGQLFKKIAISCSECSFQQASK--W 1059

Query: 2692 TPCLKFFWQDTPDIHLEKTAHIFADAVCPVLLNAIIKGDPRVKEANITWISPETTGWIGN 2871
            TPCLKFFW+D PDIHLEKTAHIFA+AVCPVLLN+IIKGDPRVKEANITWISPETT WI N
Sbjct: 1060 TPCLKFFWEDRPDIHLEKTAHIFANAVCPVLLNSIIKGDPRVKEANITWISPETTVWIKN 1119

Query: 2872 PSKEQKGELAINVVLEKEAVKKNGDAWRTVMDSCLPIIHLIDTTRSIPYAIKQVENLLGI 3051
            P K+QKG+LAI+VVLEKEAVKKNGDAWRTVMD+CLP++HLIDTTRSIPYAIKQVE+LLGI
Sbjct: 1120 PKKDQKGDLAIDVVLEKEAVKKNGDAWRTVMDACLPVLHLIDTTRSIPYAIKQVEHLLGI 1179

Query: 3052 ACTFEQAIQRLSTSVSMVTKGMLKEHLLLLASSMTCAGILVGFNQAGIKALSKALNFQAP 3231
            AC FEQA+QRLSTSVSMVTKGMLKEHLLLLASSMTCAG LVGFN AGIKAL+K LNFQ P
Sbjct: 1180 ACAFEQAVQRLSTSVSMVTKGMLKEHLLLLASSMTCAGFLVGFNVAGIKALNKTLNFQVP 1239

Query: 3232 FSEATVYTPKKCFEKAAEKCHADSLSSIVGACSWGKPVAVGTGSRFDILWDTREVELNQK 3411
            FSEATVYTPK+CFEKAAEKCHADSLSSIVGACSWGKPVAVGTGSRFDILWDTREVELNQK
Sbjct: 1240 FSEATVYTPKRCFEKAAEKCHADSLSSIVGACSWGKPVAVGTGSRFDILWDTREVELNQK 1299

Query: 3412 DGIDVYNFLNLVRGVSEEEADNECLGGDLDYYELEDNYMEAGSPELESGSAKPVFEDGLD 3591
            DGIDVYNFL++V G S EEAD+ CLGG++D +++E   ME GSPE++SG AKPVFEDGL+
Sbjct: 1300 DGIDVYNFLHMVGGGS-EEADSGCLGGEVDSFDME--IMETGSPEIDSGLAKPVFEDGLN 1356

Query: 3592 LNIDEMDVDRTGGKSTWESGPAPEDXXXXXXXXXXXXXXXXXXXXXXXSDKDLQET-GSW 3768
            L++    V+ +G    W +GP PED                       + K+   T G W
Sbjct: 1357 LDV---GVEPSG----WGTGPVPEDGTSSGGWGAAIKTTPTTGGGWGDAMKNTPTTGGGW 1409

Query: 3769 G-------------GWGANKSQEDVVPSEPWGK--KNDDSAAGGGWGTKNSDTNTEKGS- 3900
            G             GWGA KSQ DV PS  WG   K DD+ +  GWG K SD  TEK S 
Sbjct: 1410 GEAKSDQGQQIGSSGWGATKSQNDVEPSGSWGSLGKKDDNQS--GWGAK-SDNQTEKDSG 1466

Query: 3901 SWGHKAAKADETGWGSNNPQ 3960
             WGHK +K DE  WG+   Q
Sbjct: 1467 GWGHKVSKGDEHAWGAKKSQ 1486


>ref|XP_023733016.1| DNA-directed RNA polymerase V subunit 1 [Lactuca sativa]
          Length = 1990

 Score = 1893 bits (4904), Expect = 0.0
 Identities = 974/1370 (71%), Positives = 1082/1370 (78%), Gaps = 55/1370 (4%)
 Frame = +1

Query: 1    CLKFKSKRPQAKSIGVLERAFTACCEDAAQVTVNEAKTADGACYLELKVPSRSRRDGIWD 180
            CLKFK++R   K+ G+ E+  T CCE+ A VTV+  +  DGA YL+LKVPS++ ++G+W+
Sbjct: 110  CLKFKNRRLPNKTTGMFEKVLTVCCEETANVTVDVVQKQDGASYLQLKVPSKTCKEGLWE 169

Query: 181  FLDRYGYHYGDGIARPLLPSEVLIILKKIPD--ATKKKLAGRGCFFQEGYIMQHLPVPPN 354
            FL+RYGY YGDG  RPLLPSEVL++LKKI    ATKKKLAGRGCFFQEGYIMQHLP+PPN
Sbjct: 170  FLERYGYRYGDGHKRPLLPSEVLVMLKKIDKEKATKKKLAGRGCFFQEGYIMQHLPIPPN 229

Query: 355  CLSTPDVSDGISVMSSDISMTMLKKVLRQVEIIKSSRSGHPNFESLEVEVNDLQAAVAQY 534
            CLSTPDVSDGI+VMSSDISMTMLKKVLRQVEIIKSSRSG PNFESLEVEVNDLQ AVAQY
Sbjct: 230  CLSTPDVSDGINVMSSDISMTMLKKVLRQVEIIKSSRSGIPNFESLEVEVNDLQNAVAQY 289

Query: 535  LQSRGAKTSPDRNTRYGIAKEQTESSSTKAWLEKMKTLFISKGSGFSSRSVITGDPYKGV 714
            LQSRGAK SP++N RYGIAKE  +SSSTKAWLEKMKTLFISKGSGFSSRSVITGDPYKGV
Sbjct: 290  LQSRGAKASPNKNIRYGIAKELNDSSSTKAWLEKMKTLFISKGSGFSSRSVITGDPYKGV 349

Query: 715  GEIGIPFEIAQRITFEERVTEYNMKSLQKLVDDKLCLTYRDGQSTYSLREGSKGHTFLKP 894
            GEIGIPFEIAQRITFEERVTEYNMK LQKLVDDKLCLTYRDG +TYSLREGSKGHTFLKP
Sbjct: 350  GEIGIPFEIAQRITFEERVTEYNMKFLQKLVDDKLCLTYRDGNNTYSLREGSKGHTFLKP 409

Query: 895  GQVVHRKIMEGDVIFINRPPTTHKHSLQALSVYIHEDHTFKINPLICGPLSADFDGDCIH 1074
            GQVVHRKIMEGDVIFINRPPTTHKHSLQALSVYIH+DHTFKINPLICGPLSADFDGDCIH
Sbjct: 410  GQVVHRKIMEGDVIFINRPPTTHKHSLQALSVYIHDDHTFKINPLICGPLSADFDGDCIH 469

Query: 1075 IFYPQSPDAKAEVLELFAVEKQLLSSHSGHVNLQLGTDSVLSXXXXXXXXXXXXAEVQQX 1254
            IFYPQSP+AKAEVLELFAVEKQLLSSHSG+VNLQ G+DS+LS            +EVQQ 
Sbjct: 470  IFYPQSPEAKAEVLELFAVEKQLLSSHSGNVNLQFGSDSLLSLKTLFKKFFFKKSEVQQL 529

Query: 1255 XXXXXXXXXXXXXXXVRDSGPVWTVLELLETSLPRGFDCNGDKFVIRDSKILKLDYSRDX 1434
                           VR SGP+WTVLELLETSLP GFDC+G++F+I+DSKILKLDYSR+ 
Sbjct: 530  ALFTSSTLPKPSMLKVRGSGPLWTVLELLETSLPPGFDCSGERFLIKDSKILKLDYSREV 589

Query: 1435 XXXXXXXXXXXXFFTKGPNEVLKLFNSLQPLLMENLSKEGFNISLEDFIIPKPXXXXXXX 1614
                        FFTKGP EVLKLFNSLQP+LMENLS EGFN+SLEDFI+PK        
Sbjct: 590  IQSIINDVISSIFFTKGPKEVLKLFNSLQPMLMENLSGEGFNLSLEDFIVPKSILRDIET 649

Query: 1615 XXXXXXXXXRHLRKNYNEVIALQVDKRLRLVKNPISDFILRYSSMGNLIDVKSDSAVTKI 1794
                      HLR  YNEVIALQ+DK LR VK+PIS+FIL+YSSMG+LID KSDSAVT+I
Sbjct: 650  ELQDLSSLLYHLRSTYNEVIALQLDKHLRAVKSPISEFILKYSSMGSLIDSKSDSAVTRI 709

Query: 1795 VQQIGFLGLQILEKGRLYSKTLAEDLSIHFLGNYPFPDDYPYEEFGLVRNGLFHGLDPYQ 1974
            +QQIGFLGLQILEKGRLYS+TLAEDLS HF GNYPFP+ YP EEFGL+R  LFHGLDPYQ
Sbjct: 710  IQQIGFLGLQILEKGRLYSRTLAEDLSKHFRGNYPFPEKYPSEEFGLIRGCLFHGLDPYQ 769

Query: 1975 EMVHSICNREQMVRSSRGLTEPGTLFKNSMAILRDVVICYDGTVRNVCSNSIIQFEYGGV 2154
            E+VHSI NRE MVRSSRGLTEPGTLFKN MAILRDVVICYDGTVRNVCSNSIIQFEYG  
Sbjct: 770  ELVHSISNREVMVRSSRGLTEPGTLFKNLMAILRDVVICYDGTVRNVCSNSIIQFEYGVH 829

Query: 2155 THNFFAAGEPVGVLAATAMSNPAYKAVLDSSPNSNSSWDMMKEILFCGVNFKNVHNDRRV 2334
            T N FAAGEPVGVLAATAMSNPAYKAVLDSSPNSNSSWDMMKEIL CGVNFKNV+NDRRV
Sbjct: 830  TQNLFAAGEPVGVLAATAMSNPAYKAVLDSSPNSNSSWDMMKEILLCGVNFKNVNNDRRV 889

Query: 2335 VLYLNACDCGAKYCLENAAYLVKNHLRKVSLKDVALEFLIEYDRKQVAVDNAIDAGLVGH 2514
            VLYLN CDCG KYCLE +AY VKNHLRKVSLKD A+EFLIE+ R+Q + +  I AGLVGH
Sbjct: 890  VLYLNDCDCGNKYCLEKSAYFVKNHLRKVSLKDTAVEFLIEFTRQQTSENAEIGAGLVGH 949

Query: 2515 VHLNKALLEESKISMEEILTKCEESLNSFRKKKK-VGQLFKKIALDCSECSFNQSSKSNW 2691
            +HLN+A+L+ESKI+MEE+L KCE++LN +RKKKK VG LF+ IAL C ECSF+QSS++ W
Sbjct: 950  IHLNQAMLKESKINMEEVLAKCEDTLNVYRKKKKEVGLLFRSIALSCGECSFHQSSENKW 1009

Query: 2692 TPCLKFFWQDTPDIHLEKTAHIFADAVCPVLLNAIIKGDPRVKEANITWISPETTGWI-- 2865
             PCLKFF QDT  + LEK A I AD VCPVLL+ IIKGDPRVKEANI WI PE+T WI  
Sbjct: 1010 MPCLKFFRQDTGGLQLEKAARILADFVCPVLLDTIIKGDPRVKEANIIWIGPESTVWIRN 1069

Query: 2866 --------------------GNPSKEQKGELAINVVLEKEAVKKNGDAWRTVMDSCLPII 2985
                                 NP+K+QKGELAI+VVLEK AVKK+GDAWR VMD+CLPI+
Sbjct: 1070 PNKDQSSEFSNPNKDKKGEFSNPNKDQKGELAIDVVLEKAAVKKSGDAWRIVMDTCLPIM 1129

Query: 2986 HLIDTTRSIPYAIKQVENLLGIACTFEQAIQRLSTSVSMVTKGMLKEHLLLLASSMTCAG 3165
            HLIDTTRSIPYAIKQVE+LLG +C FEQA+QRLSTSVSMV+KGMLKEHLLLLA+SMTCAG
Sbjct: 1130 HLIDTTRSIPYAIKQVEDLLGTSCAFEQAVQRLSTSVSMVSKGMLKEHLLLLANSMTCAG 1189

Query: 3166 ILVGFNQAGIKALSKALNFQAPFSEATVYTPKKCFEKAAEKCHADSLSSIVGACSWGKPV 3345
             LVGFNQAGIKALSK LNFQ PFSEAT+YTPK+CFEKAAEKCH+DSLSSIV ACSWGKPV
Sbjct: 1190 TLVGFNQAGIKALSKTLNFQVPFSEATLYTPKRCFEKAAEKCHSDSLSSIVAACSWGKPV 1249

Query: 3346 AVGTGSRFDILWDTREVELNQKDGIDVYNFLNLVRGVSEEEADNECLGGDLDYYELEDNY 3525
            AVGTGSRFDILWDTREVELNQKDGIDVYNFL+LV G SEEEADN CLGG++D +++EDN+
Sbjct: 1250 AVGTGSRFDILWDTREVELNQKDGIDVYNFLHLVHGGSEEEADNGCLGGEVDSFDMEDNF 1309

Query: 3526 MEAGSPELESGSAKPVFEDGLDLNIDEMDVDRTGGKSTWESGPAPEDXXXXXXXXXXXXX 3705
            ME GSPE +SG+ K VFED L+LN+ +M+              APED             
Sbjct: 1310 MEVGSPEHDSGAPKAVFEDSLELNLGQMET------------AAPEDGNSSGGWGAAVKT 1357

Query: 3706 XXXXXXXXXXSDKDLQETGSW-----------GGWGA--------NKSQEDVVPSEP--- 3819
                             +GSW           G WGA          S    V + P   
Sbjct: 1358 TPTDGWGAAVKSTPTDSSGSWGAAVKTTPTTEGSWGAAVKTTPTTEGSWGAAVKATPATE 1417

Query: 3820 -----WGKKNDDSAAGGGWGTKNSDTNTEKGSS---WGHKAAKADETGWG 3945
                 WGKK ++ A    WG K  D++T  GS    WG    K +ET WG
Sbjct: 1418 GSGSGWGKKAEEPA----WGGKKPDSDTGAGSGSVPWG----KREETAWG 1459


>gb|PLY74549.1| hypothetical protein LSAT_7X31901 [Lactuca sativa]
          Length = 2538

 Score = 1893 bits (4904), Expect = 0.0
 Identities = 974/1370 (71%), Positives = 1082/1370 (78%), Gaps = 55/1370 (4%)
 Frame = +1

Query: 1    CLKFKSKRPQAKSIGVLERAFTACCEDAAQVTVNEAKTADGACYLELKVPSRSRRDGIWD 180
            CLKFK++R   K+ G+ E+  T CCE+ A VTV+  +  DGA YL+LKVPS++ ++G+W+
Sbjct: 102  CLKFKNRRLPNKTTGMFEKVLTVCCEETANVTVDVVQKQDGASYLQLKVPSKTCKEGLWE 161

Query: 181  FLDRYGYHYGDGIARPLLPSEVLIILKKIPD--ATKKKLAGRGCFFQEGYIMQHLPVPPN 354
            FL+RYGY YGDG  RPLLPSEVL++LKKI    ATKKKLAGRGCFFQEGYIMQHLP+PPN
Sbjct: 162  FLERYGYRYGDGHKRPLLPSEVLVMLKKIDKEKATKKKLAGRGCFFQEGYIMQHLPIPPN 221

Query: 355  CLSTPDVSDGISVMSSDISMTMLKKVLRQVEIIKSSRSGHPNFESLEVEVNDLQAAVAQY 534
            CLSTPDVSDGI+VMSSDISMTMLKKVLRQVEIIKSSRSG PNFESLEVEVNDLQ AVAQY
Sbjct: 222  CLSTPDVSDGINVMSSDISMTMLKKVLRQVEIIKSSRSGIPNFESLEVEVNDLQNAVAQY 281

Query: 535  LQSRGAKTSPDRNTRYGIAKEQTESSSTKAWLEKMKTLFISKGSGFSSRSVITGDPYKGV 714
            LQSRGAK SP++N RYGIAKE  +SSSTKAWLEKMKTLFISKGSGFSSRSVITGDPYKGV
Sbjct: 282  LQSRGAKASPNKNIRYGIAKELNDSSSTKAWLEKMKTLFISKGSGFSSRSVITGDPYKGV 341

Query: 715  GEIGIPFEIAQRITFEERVTEYNMKSLQKLVDDKLCLTYRDGQSTYSLREGSKGHTFLKP 894
            GEIGIPFEIAQRITFEERVTEYNMK LQKLVDDKLCLTYRDG +TYSLREGSKGHTFLKP
Sbjct: 342  GEIGIPFEIAQRITFEERVTEYNMKFLQKLVDDKLCLTYRDGNNTYSLREGSKGHTFLKP 401

Query: 895  GQVVHRKIMEGDVIFINRPPTTHKHSLQALSVYIHEDHTFKINPLICGPLSADFDGDCIH 1074
            GQVVHRKIMEGDVIFINRPPTTHKHSLQALSVYIH+DHTFKINPLICGPLSADFDGDCIH
Sbjct: 402  GQVVHRKIMEGDVIFINRPPTTHKHSLQALSVYIHDDHTFKINPLICGPLSADFDGDCIH 461

Query: 1075 IFYPQSPDAKAEVLELFAVEKQLLSSHSGHVNLQLGTDSVLSXXXXXXXXXXXXAEVQQX 1254
            IFYPQSP+AKAEVLELFAVEKQLLSSHSG+VNLQ G+DS+LS            +EVQQ 
Sbjct: 462  IFYPQSPEAKAEVLELFAVEKQLLSSHSGNVNLQFGSDSLLSLKTLFKKFFFKKSEVQQL 521

Query: 1255 XXXXXXXXXXXXXXXVRDSGPVWTVLELLETSLPRGFDCNGDKFVIRDSKILKLDYSRDX 1434
                           VR SGP+WTVLELLETSLP GFDC+G++F+I+DSKILKLDYSR+ 
Sbjct: 522  ALFTSSTLPKPSMLKVRGSGPLWTVLELLETSLPPGFDCSGERFLIKDSKILKLDYSREV 581

Query: 1435 XXXXXXXXXXXXFFTKGPNEVLKLFNSLQPLLMENLSKEGFNISLEDFIIPKPXXXXXXX 1614
                        FFTKGP EVLKLFNSLQP+LMENLS EGFN+SLEDFI+PK        
Sbjct: 582  IQSIINDVISSIFFTKGPKEVLKLFNSLQPMLMENLSGEGFNLSLEDFIVPKSILRDIET 641

Query: 1615 XXXXXXXXXRHLRKNYNEVIALQVDKRLRLVKNPISDFILRYSSMGNLIDVKSDSAVTKI 1794
                      HLR  YNEVIALQ+DK LR VK+PIS+FIL+YSSMG+LID KSDSAVT+I
Sbjct: 642  ELQDLSSLLYHLRSTYNEVIALQLDKHLRAVKSPISEFILKYSSMGSLIDSKSDSAVTRI 701

Query: 1795 VQQIGFLGLQILEKGRLYSKTLAEDLSIHFLGNYPFPDDYPYEEFGLVRNGLFHGLDPYQ 1974
            +QQIGFLGLQILEKGRLYS+TLAEDLS HF GNYPFP+ YP EEFGL+R  LFHGLDPYQ
Sbjct: 702  IQQIGFLGLQILEKGRLYSRTLAEDLSKHFRGNYPFPEKYPSEEFGLIRGCLFHGLDPYQ 761

Query: 1975 EMVHSICNREQMVRSSRGLTEPGTLFKNSMAILRDVVICYDGTVRNVCSNSIIQFEYGGV 2154
            E+VHSI NRE MVRSSRGLTEPGTLFKN MAILRDVVICYDGTVRNVCSNSIIQFEYG  
Sbjct: 762  ELVHSISNREVMVRSSRGLTEPGTLFKNLMAILRDVVICYDGTVRNVCSNSIIQFEYGVH 821

Query: 2155 THNFFAAGEPVGVLAATAMSNPAYKAVLDSSPNSNSSWDMMKEILFCGVNFKNVHNDRRV 2334
            T N FAAGEPVGVLAATAMSNPAYKAVLDSSPNSNSSWDMMKEIL CGVNFKNV+NDRRV
Sbjct: 822  TQNLFAAGEPVGVLAATAMSNPAYKAVLDSSPNSNSSWDMMKEILLCGVNFKNVNNDRRV 881

Query: 2335 VLYLNACDCGAKYCLENAAYLVKNHLRKVSLKDVALEFLIEYDRKQVAVDNAIDAGLVGH 2514
            VLYLN CDCG KYCLE +AY VKNHLRKVSLKD A+EFLIE+ R+Q + +  I AGLVGH
Sbjct: 882  VLYLNDCDCGNKYCLEKSAYFVKNHLRKVSLKDTAVEFLIEFTRQQTSENAEIGAGLVGH 941

Query: 2515 VHLNKALLEESKISMEEILTKCEESLNSFRKKKK-VGQLFKKIALDCSECSFNQSSKSNW 2691
            +HLN+A+L+ESKI+MEE+L KCE++LN +RKKKK VG LF+ IAL C ECSF+QSS++ W
Sbjct: 942  IHLNQAMLKESKINMEEVLAKCEDTLNVYRKKKKEVGLLFRSIALSCGECSFHQSSENKW 1001

Query: 2692 TPCLKFFWQDTPDIHLEKTAHIFADAVCPVLLNAIIKGDPRVKEANITWISPETTGWI-- 2865
             PCLKFF QDT  + LEK A I AD VCPVLL+ IIKGDPRVKEANI WI PE+T WI  
Sbjct: 1002 MPCLKFFRQDTGGLQLEKAARILADFVCPVLLDTIIKGDPRVKEANIIWIGPESTVWIRN 1061

Query: 2866 --------------------GNPSKEQKGELAINVVLEKEAVKKNGDAWRTVMDSCLPII 2985
                                 NP+K+QKGELAI+VVLEK AVKK+GDAWR VMD+CLPI+
Sbjct: 1062 PNKDQSSEFSNPNKDKKGEFSNPNKDQKGELAIDVVLEKAAVKKSGDAWRIVMDTCLPIM 1121

Query: 2986 HLIDTTRSIPYAIKQVENLLGIACTFEQAIQRLSTSVSMVTKGMLKEHLLLLASSMTCAG 3165
            HLIDTTRSIPYAIKQVE+LLG +C FEQA+QRLSTSVSMV+KGMLKEHLLLLA+SMTCAG
Sbjct: 1122 HLIDTTRSIPYAIKQVEDLLGTSCAFEQAVQRLSTSVSMVSKGMLKEHLLLLANSMTCAG 1181

Query: 3166 ILVGFNQAGIKALSKALNFQAPFSEATVYTPKKCFEKAAEKCHADSLSSIVGACSWGKPV 3345
             LVGFNQAGIKALSK LNFQ PFSEAT+YTPK+CFEKAAEKCH+DSLSSIV ACSWGKPV
Sbjct: 1182 TLVGFNQAGIKALSKTLNFQVPFSEATLYTPKRCFEKAAEKCHSDSLSSIVAACSWGKPV 1241

Query: 3346 AVGTGSRFDILWDTREVELNQKDGIDVYNFLNLVRGVSEEEADNECLGGDLDYYELEDNY 3525
            AVGTGSRFDILWDTREVELNQKDGIDVYNFL+LV G SEEEADN CLGG++D +++EDN+
Sbjct: 1242 AVGTGSRFDILWDTREVELNQKDGIDVYNFLHLVHGGSEEEADNGCLGGEVDSFDMEDNF 1301

Query: 3526 MEAGSPELESGSAKPVFEDGLDLNIDEMDVDRTGGKSTWESGPAPEDXXXXXXXXXXXXX 3705
            ME GSPE +SG+ K VFED L+LN+ +M+              APED             
Sbjct: 1302 MEVGSPEHDSGAPKAVFEDSLELNLGQMET------------AAPEDGNSSGGWGAAVKT 1349

Query: 3706 XXXXXXXXXXSDKDLQETGSW-----------GGWGA--------NKSQEDVVPSEP--- 3819
                             +GSW           G WGA          S    V + P   
Sbjct: 1350 TPTDGWGAAVKSTPTDSSGSWGAAVKTTPTTEGSWGAAVKTTPTTEGSWGAAVKATPATE 1409

Query: 3820 -----WGKKNDDSAAGGGWGTKNSDTNTEKGSS---WGHKAAKADETGWG 3945
                 WGKK ++ A    WG K  D++T  GS    WG    K +ET WG
Sbjct: 1410 GSGSGWGKKAEEPA----WGGKKPDSDTGAGSGSVPWG----KREETAWG 1451


>ref|XP_021981591.1| LOW QUALITY PROTEIN: DNA-directed RNA polymerase V subunit 1-like
            [Helianthus annuus]
          Length = 1794

 Score = 1867 bits (4836), Expect = 0.0
 Identities = 965/1349 (71%), Positives = 1078/1349 (79%), Gaps = 29/1349 (2%)
 Frame = +1

Query: 1    CLKFKSKRPQAKSIGVL--ERAFTACCEDAAQVTVNEAKTADGACYLELKVPSRS--RRD 168
            CLKFK KR Q+K+ GVL  ERAF  CC++ AQVTV+E +  DGAC+LELK+PSR+   RD
Sbjct: 101  CLKFKDKRLQSKNTGVLRLERAFAFCCKETAQVTVSENQKQDGACFLELKLPSRTAKNRD 160

Query: 169  GIWDFLDRYGYHYGD-GIARPLLPSEVLIILKKIPDATKKKLAGRGCFFQEGYIMQHLPV 345
            G WDFLD YGY YG  G  RPLLPSEVL ILKKIP+ATKKKLAGRGCF QEGYIMQHLPV
Sbjct: 161  GSWDFLDSYGYRYGGHGSTRPLLPSEVLKILKKIPEATKKKLAGRGCFPQEGYIMQHLPV 220

Query: 346  PPNCLSTPDVSDGISVMSSDISMTMLKKVLRQVEIIKSSRSGHPNFESLEVEVNDLQAAV 525
            PPNCLSTPDVSDGI+V SSDISM +LKKVLRQVEIIKSSRSG PNFESLEVEVNDLQ AV
Sbjct: 221  PPNCLSTPDVSDGITVTSSDISMPILKKVLRQVEIIKSSRSGIPNFESLEVEVNDLQLAV 280

Query: 526  AQYLQSRGAKTSPDRNTRYGIAKEQTESSSTKAWLEKMKTLFISKGSGFSSRSVITGDPY 705
            +QYLQSRGAK SPDRN RY I +   +SSSTKAWLEKMKTLFISKGSGFSSRSVITGDPY
Sbjct: 281  SQYLQSRGAKASPDRNARYAIVRTVNDSSSTKAWLEKMKTLFISKGSGFSSRSVITGDPY 340

Query: 706  KGVGEIGIPFEIAQRITFEERVTEYNMKSLQKLVDDKLCLTYRDGQSTYSLREGSKGHTF 885
            +GVGEIGIP+EIAQRITFEERVTE+N+K LQ+LVDDKLCLTY DG++TYSLREGSKGHTF
Sbjct: 341  RGVGEIGIPYEIAQRITFEERVTEHNVKFLQQLVDDKLCLTYIDGETTYSLREGSKGHTF 400

Query: 886  LKPGQVVHRKIMEGDVIFINRPPTTHKHSLQALSVYIHEDHTFKINPLICGPLSADFDGD 1065
            LKPGQ+VHRKIMEGD+IFINRPPTTHKH LQALSVYIH+ HTFKINPLICGPLSADFDGD
Sbjct: 401  LKPGQIVHRKIMEGDLIFINRPPTTHKHYLQALSVYIHDGHTFKINPLICGPLSADFDGD 460

Query: 1066 CIHIFYPQSPDAKAEVLELFAVEKQLLSSHSGHVNLQLGTDSVLSXXXXXXXXXXXXAEV 1245
            CIHIFYPQS +AKAEV+ELFAVEKQLLSSHSG+VNLQLGTDSVLS            A+V
Sbjct: 461  CIHIFYPQSSEAKAEVMELFAVEKQLLSSHSGNVNLQLGTDSVLSLKTMFKKHFFTKAQV 520

Query: 1246 QQXXXXXXXXXXXXXXXXVRDSGPVWTVLELLETSLPRGFDCNGDKFVIRDSKILKLDYS 1425
            QQ                 RD GP+WTVLELLETSLPRGFDC+GD+F IRDSKILKLDYS
Sbjct: 521  QQLALFTSNLLPKTSMLKARDCGPLWTVLELLETSLPRGFDCSGDRFAIRDSKILKLDYS 580

Query: 1426 RDXXXXXXXXXXXXXFFTKGPNEVLKLFNSLQPLLMENLSKEGFNISLEDFIIPKPXXXX 1605
            RD             FF+KGPNEVLKLFNSLQP+LMENL  +GFN+SLEDFI+P      
Sbjct: 581  RDKMQSIVNEIISSIFFSKGPNEVLKLFNSLQPMLMENLFGDGFNLSLEDFIVPTDVLKS 640

Query: 1606 XXXXXXXXXXXXRHLRKNYNEVIALQVDKRLRLVKNPISDFILRYSSMGNLIDVKSDSAV 1785
                         HLR NYNEVI +Q++K LR  K PISDFILR+SSMGNLID KSDSA+
Sbjct: 641  IEERLQELSSLLYHLRFNYNEVIDMQLEKHLRASKAPISDFILRFSSMGNLIDPKSDSAI 700

Query: 1786 TKIVQQIGFLGLQILEKGRLYSKTLAEDLSIHFLGNYPFPDDYPYEEFGLVRNGLFHGLD 1965
            TKI QQIGFLGLQI E+GRLYS+TLAEDLS HF+G+YPFP  YP+EEFGL+R+ LF+GLD
Sbjct: 701  TKIAQQIGFLGLQIYERGRLYSRTLAEDLSSHFVGHYPFPKRYPFEEFGLIRSCLFNGLD 760

Query: 1966 PYQEMVHSICNREQMVRSSRGLTEPGTLFKNSMAILRDVVICYDGTVRNVCSNSIIQFEY 2145
            PY+EMVHSI +RE M+RSSRGL EPG LFKNSM+ILRDVVICYDGTVRNVCSNSIIQFEY
Sbjct: 761  PYEEMVHSIASREVMIRSSRGLMEPGILFKNSMSILRDVVICYDGTVRNVCSNSIIQFEY 820

Query: 2146 GGVTHNFFAAGEPVGVLAATAMSNPAYKAVLDSSPNSNSSWDMMKEILFCGVNFKNVHND 2325
            G +  N FAAGEPVGVLAATAMSNPAYKAVLDSSP+SNSSW+MMKEIL CGVNFKN  ND
Sbjct: 821  GALLKNLFAAGEPVGVLAATAMSNPAYKAVLDSSPSSNSSWNMMKEILQCGVNFKNADND 880

Query: 2326 RRVVLYLNACDCGAKYCLENAAYLVKNHLRKVSLKDVALEFL--IEYDRKQVAVDNA-ID 2496
            R VVLYLN C+CG KYC+E AA  V+NHLRKVSLKDV   +   I+Y R+QV +DNA I+
Sbjct: 881  RLVVLYLNDCNCGEKYCVEKAAIKVQNHLRKVSLKDVVFSYXYSIKYTRQQVPLDNAEIE 940

Query: 2497 AGLVGHVHLNKALLEESKISMEEILTKCEESLNSFRKKKK-VGQLFKKIALDCSECSFNQ 2673
            AGLVGHVHLNK LLEES ISME++LTKCE++L SFRKKKK +G++FK IA+ CSECSF Q
Sbjct: 941  AGLVGHVHLNKTLLEESDISMEKVLTKCEDTLTSFRKKKKEIGRIFKNIAISCSECSFQQ 1000

Query: 2674 SSKSNWTPCLKFFWQDTPDIHLEKTAHIFADAVCPVLLNAIIKGDPRVKEANITWISPET 2853
            SS+  WTPCLKF+W+D P IHLE+TAH F D VCPVLLN+IIKGDPRVKE NIT ISPET
Sbjct: 1001 SSE--WTPCLKFYWEDNPGIHLEETAHKFMDTVCPVLLNSIIKGDPRVKEVNITRISPET 1058

Query: 2854 TGWIGNPSKEQKGELAINVVLEKEAVKKNGDAWRTVMDSCLPIIHLIDTTRSIPYAIKQV 3033
            T WI NP K+Q+G+LA+NVVLEKEAVKK+GDAW TVMD+C P+I LIDTTRSIPY+IKQV
Sbjct: 1059 TVWIKNPLKDQEGDLAVNVVLEKEAVKKSGDAWMTVMDACHPVIDLIDTTRSIPYSIKQV 1118

Query: 3034 ENLLGIACTFEQAIQRLSTSVSMVTKGMLKEHLLLLASSMTCAGILVGFNQAGIKALSKA 3213
            E+LLGIAC FEQA+Q LSTSVSMVTKGMLKEHLLLLASSMTCAG LVGFN AGIKAL+K 
Sbjct: 1119 EHLLGIACAFEQAVQCLSTSVSMVTKGMLKEHLLLLASSMTCAGFLVGFNLAGIKALNKM 1178

Query: 3214 LNFQAPFSEATVYTPKKCFEKAAEKCHADSLSSIVGACSWGKPVAVGTGSRFDILWDTRE 3393
            LNFQ PFSEATVYTPK+CFEKAAEKC+ DSLSSIVGACSWGKPVAVGTGSRFDILWDTR+
Sbjct: 1179 LNFQIPFSEATVYTPKRCFEKAAEKCYTDSLSSIVGACSWGKPVAVGTGSRFDILWDTRQ 1238

Query: 3394 VELNQKDGIDVYNFLNLVRGVSEEEADNECLGGDLDYYELEDNYMEAGSPELESGSAKPV 3573
            VELNQKDGIDVYNFL++V G   EEAD+ CLGGD+D Y +E   ME GSPE++SG AKPV
Sbjct: 1239 VELNQKDGIDVYNFLHIVGG-GAEEADSGCLGGDVDSYNME--MMETGSPEIDSGFAKPV 1295

Query: 3574 FEDGLDLNIDEMDVDRTGGKSTWESGPAPED---XXXXXXXXXXXXXXXXXXXXXXXSDK 3744
            FEDG+D+            +STW +GP PED                          S K
Sbjct: 1296 FEDGMDVE-----------QSTWGTGPTPEDGTSSGGGWGGAVKTTPTTSAGWGTTKSQK 1344

Query: 3745 DLQETGSWG----------GWGANKSQEDVV---PSEPWGK---KNDDSAAGGGWGTKNS 3876
            D++ +GSW            WG+ KS+        S  WG+   K D    G GWG K S
Sbjct: 1345 DVEPSGSWSLSGEKEDNEPVWGSKKSENKTAMGSGSGSWGQTVVKGD----GPGWGAKKS 1400

Query: 3877 DTNTEKGS-SWGHKAAKADETGWGSNNPQ 3960
            D  TE+GS +WG   AK DE+ WG+   Q
Sbjct: 1401 DNETEEGSGAWGQVVAKGDESRWGAKESQ 1429


>gb|OTG37776.1| putative DNA-directed RNA polymerase, subunit beta-prime [Helianthus
            annuus]
          Length = 1808

 Score = 1816 bits (4705), Expect = 0.0
 Identities = 955/1381 (69%), Positives = 1064/1381 (77%), Gaps = 61/1381 (4%)
 Frame = +1

Query: 1    CLKFKSKRPQAKSIGVLERAFTACCEDAAQVTVNEAKTADGACYLELKVPSRS--RRDGI 174
            CLKFK KR                  + AQVTV+E +  DGAC+LELK+PSR+   RDG 
Sbjct: 101  CLKFKDKR------------------ETAQVTVSENQKQDGACFLELKLPSRTAKNRDGS 142

Query: 175  WDFLDRYGYHYGD-GIARPLLPSEVLIILKKIPDATKKKLAGRGCFFQEGYIMQHLPVPP 351
            WDFLD YGY YG  G  RPLLPSEVL ILKKIP+ATKKKLAGRGCF QEGYIMQHLPVPP
Sbjct: 143  WDFLDSYGYRYGGHGSTRPLLPSEVLKILKKIPEATKKKLAGRGCFPQEGYIMQHLPVPP 202

Query: 352  NCLSTPDVSDGISVMSSDISMTMLKKVLRQVEIIKSSRSGHPNFESLEVEVNDLQAAVAQ 531
            NCLSTPDVSDGI+V SSDISM +LKKVLRQVEIIKSSRSG PNFESLEVEVNDLQ AV+Q
Sbjct: 203  NCLSTPDVSDGITVTSSDISMPILKKVLRQVEIIKSSRSGIPNFESLEVEVNDLQLAVSQ 262

Query: 532  YLQSRGAKTSPDRNTRYGIAKEQTESSSTKAWLEKMKTLFISKGSGFSSRSVITGDPYKG 711
            YLQSRGAK SPDRN RY I +   +SSSTKAWLEKMKTLFISKGSGFSSRSVITGDPY+G
Sbjct: 263  YLQSRGAKASPDRNARYAIVRTVNDSSSTKAWLEKMKTLFISKGSGFSSRSVITGDPYRG 322

Query: 712  VGEIGIPFEIAQRITFEERVTEYNMKSLQKLVDDKLCLTYRDGQSTYSLREGSKGHTFLK 891
            VGEIGIP+EIAQRITFEERVTE+N+K LQ+LVDDKLCLTY DG++TYSLREGSKGHTFLK
Sbjct: 323  VGEIGIPYEIAQRITFEERVTEHNVKFLQQLVDDKLCLTYIDGETTYSLREGSKGHTFLK 382

Query: 892  PGQVVHRKIMEGDVIFINRPPTTHKHSLQALSVYIHEDHTFKINPLICGPLSADFDGDCI 1071
            PGQ+VHRKIMEGD+IFINRPPTTHKH LQALSVYIH+ HTFKINPLICGPLSADFDGDCI
Sbjct: 383  PGQIVHRKIMEGDLIFINRPPTTHKHYLQALSVYIHDGHTFKINPLICGPLSADFDGDCI 442

Query: 1072 HIFYPQSPDAKAEVLELFAVEKQLLSSHSGHVNLQLGTDSVLSXXXXXXXXXXXXAEVQQ 1251
            HIFYPQS +AKAEV+ELFAVEKQLLSSHSG+VNLQLGTDSVLS            A+VQQ
Sbjct: 443  HIFYPQSSEAKAEVMELFAVEKQLLSSHSGNVNLQLGTDSVLSLKTMFKKHFFTKAQVQQ 502

Query: 1252 XXXXXXXXXXXXXXXXVRDSGPVWTVLELLETSLPRGFDCNGDKFVIRDSKILKLDYSRD 1431
                             RD GP+WTVLELLETSLPRGFDC+GD+F IRDSKILKLDYSRD
Sbjct: 503  LALFTSNLLPKTSMLKARDCGPLWTVLELLETSLPRGFDCSGDRFAIRDSKILKLDYSRD 562

Query: 1432 XXXXXXXXXXXXXFFTKGPNEVLKLFNSLQPLLMENLSKEGFNISLEDFIIPKPXXXXXX 1611
                         FF+KGPNEVLKLFNSLQP+LMENL  +GFN+SLEDFI+P        
Sbjct: 563  KMQSIVNEIISSIFFSKGPNEVLKLFNSLQPMLMENLFGDGFNLSLEDFIVPTDVLKSIE 622

Query: 1612 XXXXXXXXXXRHLRKNYNEVIALQVDKRLRLVKNPISDFILRYSSMGNLIDVKSDSAVTK 1791
                       HLR NYNEVI +Q++K LR  K PISDFILR+SSMGNLID KSDSA+TK
Sbjct: 623  ERLQELSSLLYHLRFNYNEVIDMQLEKHLRASKAPISDFILRFSSMGNLIDPKSDSAITK 682

Query: 1792 IVQQIGFLGLQILEKGRLYSKTLAEDLSIHFLGNYPFPDDYPYEEFGLVRNGLFHGLDPY 1971
            I QQIGFLGLQI E+GRLYS+TLAEDLS HF+G+YPFP  YP+EEFGL+R+ LF+GLDPY
Sbjct: 683  IAQQIGFLGLQIYERGRLYSRTLAEDLSSHFVGHYPFPKRYPFEEFGLIRSCLFNGLDPY 742

Query: 1972 QEMVHSICNREQMVRSSRGLTEPGTLFKNSMAILRDVVICYDGTVRNVCSNSIIQFEYGG 2151
            +EMVHSI +RE M+RSSRGL EPG LFKNSM+ILRDVVICYDGTVRNVCSNSIIQFEYG 
Sbjct: 743  EEMVHSIASREVMIRSSRGLMEPGILFKNSMSILRDVVICYDGTVRNVCSNSIIQFEYGA 802

Query: 2152 VTHNFFAAGEPVGVLAATAMSNPAYKAVLDSSPNSNSSWDMMKEILFCGVNFKNVHNDRR 2331
            +  N FAAGEPVGVLAATAMSNPAYKAVLDSSP+SNSSW+MMKEIL CGVNFKN  NDR 
Sbjct: 803  LLKNLFAAGEPVGVLAATAMSNPAYKAVLDSSPSSNSSWNMMKEILQCGVNFKNADNDRL 862

Query: 2332 VVLYLNACDCGAKYCLENAAYLVKNHLRKVSLKDV-------ALEFLI----EYDRKQVA 2478
            VVLYLN C+CG KYC+E AA  V+NHLRKVSLKDV        L FL+     Y R+QV 
Sbjct: 863  VVLYLNDCNCGEKYCVEKAAIKVQNHLRKVSLKDVNIIYGLITLLFLMISTYRYTRQQVP 922

Query: 2479 VDNA-IDAGLVGHVHLNKALLEESKISMEEILTKCEESLNSFRKKKK-VGQLFKKIALDC 2652
            +DNA I+AGLVGHVHLNK LLEES ISME++LTKCE++L SFRKKKK +G++FK IA+ C
Sbjct: 923  LDNAEIEAGLVGHVHLNKTLLEESDISMEKVLTKCEDTLTSFRKKKKEIGRIFKNIAISC 982

Query: 2653 -------------------------SECSFNQSSKSNWTPCLKFFWQDTPDIHLEKTAHI 2757
                                      ECSF QSS+  WTPCLKF+W+D P IHLE+TAH 
Sbjct: 983  RYVIWHNLFYCLRVGKIDKKVNDAMCECSFQQSSE--WTPCLKFYWEDNPGIHLEETAHK 1040

Query: 2758 FADAVCPVLLNAIIKGDPRVKEANITWISPETTGWIGNPSKEQKGELAINVVLEKEAVKK 2937
            F D VCPVLLN+IIKGDPRVKE NIT ISPETT WI NP K+Q+G+LA+NVVLEKEAVKK
Sbjct: 1041 FMDTVCPVLLNSIIKGDPRVKEVNITRISPETTVWIKNPLKDQEGDLAVNVVLEKEAVKK 1100

Query: 2938 NGDAWRTVMDSCLPIIHLIDTTRSIPYAIKQVENLLGIACTFEQAIQRLSTSVSMVTKGM 3117
            +GDAW TVMD+C P+I LIDTTRSIPY+IKQVE+LLGIAC FEQA+Q LSTSVSMVTKGM
Sbjct: 1101 SGDAWMTVMDACHPVIDLIDTTRSIPYSIKQVEHLLGIACAFEQAVQCLSTSVSMVTKGM 1160

Query: 3118 LKEHLLLLASSMTCAGILVGFNQAGIKALSKALNFQAPFSEATVYTPKKCFEKAAEKCHA 3297
            LKEHLLLLASSMTCAG LVGFN AGIKAL+K LNFQ PFSEATVYTPK+CFEKAAEKC+ 
Sbjct: 1161 LKEHLLLLASSMTCAGFLVGFNLAGIKALNKMLNFQIPFSEATVYTPKRCFEKAAEKCYT 1220

Query: 3298 DSLSSIVGACSWGKPVAVGTGSRFDILWDTREVELNQKDGIDVYNFLNLVRGVSEEEADN 3477
            DSLSSIVGACSWGKPVAVGTGSRFDILWDTR+VELNQKDGIDVYNFL++V G   EEAD+
Sbjct: 1221 DSLSSIVGACSWGKPVAVGTGSRFDILWDTRQVELNQKDGIDVYNFLHIVGG-GAEEADS 1279

Query: 3478 ECLGGDLDYYELEDNYMEAGSPELESGSAKPVFEDGLDLNIDEMDVDRTGGKSTWESGPA 3657
             CLGGD+D Y +E   ME GSPE++SG AKPVFEDG+D+            +STW +GP 
Sbjct: 1280 GCLGGDVDSYNME--MMETGSPEIDSGFAKPVFEDGMDVE-----------QSTWGTGPT 1326

Query: 3658 PED---XXXXXXXXXXXXXXXXXXXXXXXSDKDLQETGSWG----------GWGANKSQE 3798
            PED                          S KD++ +GSW            WG+ KS+ 
Sbjct: 1327 PEDGTSSGGGWGGAVKTTPTTSAGWGTTKSQKDVEPSGSWSLSGEKEDNEPVWGSKKSEN 1386

Query: 3799 DVV---PSEPWGK---KNDDSAAGGGWGTKNSDTNTEKGS-SWGHKAAKADETGWGSNNP 3957
                   S  WG+   K D    G GWG K SD  TE+GS +WG   AK DE+ WG+   
Sbjct: 1387 KTAMGSGSGSWGQTVVKGD----GPGWGAKKSDNETEEGSGAWGQVVAKGDESRWGAKES 1442

Query: 3958 Q 3960
            Q
Sbjct: 1443 Q 1443


>ref|XP_022866101.1| DNA-directed RNA polymerase V subunit 1 [Olea europaea var.
            sylvestris]
 ref|XP_022866102.1| DNA-directed RNA polymerase V subunit 1 [Olea europaea var.
            sylvestris]
 ref|XP_022866103.1| DNA-directed RNA polymerase V subunit 1 [Olea europaea var.
            sylvestris]
 ref|XP_022866104.1| DNA-directed RNA polymerase V subunit 1 [Olea europaea var.
            sylvestris]
          Length = 2027

 Score = 1537 bits (3980), Expect = 0.0
 Identities = 795/1364 (58%), Positives = 987/1364 (72%), Gaps = 46/1364 (3%)
 Frame = +1

Query: 1    CLKFKSKRPQAKSIGVLERAFTACCEDAAQVTVNEAKTADGACYLELKVPSRSRRDGIWD 180
            CLK K+++   K+IGV ER  ++CCE+ +Q+++NE +T DGACYLELK+PSRS R+G W+
Sbjct: 101  CLKVKNRK--VKNIGVAERVLSSCCEETSQISINEFRTTDGACYLELKIPSRSVREGFWN 158

Query: 181  FLDRYGYHYGDGIARPLLPSEVLIILKKIPDATKKKLAGRGCFFQEGYIMQHLPVPPNCL 360
            FL++YG+ YG   +R LLPSEV+ ILKKIP  T+KKL  +G F Q+GYI+QHLPVPPNCL
Sbjct: 159  FLEKYGFRYGRSYSRALLPSEVMAILKKIPKETRKKLDAKGYFPQDGYILQHLPVPPNCL 218

Query: 361  STPDVSDGISVMSSDISMTMLKKVLRQVEIIKSSRSGHPNFESLEVEVNDLQAAVAQYLQ 540
            S PDVSDGIS MS+D S+T+LKKVL+QVE+IK+SRSG PNFES E+E NDLQAAVAQY Q
Sbjct: 219  SVPDVSDGISTMSTDYSITLLKKVLKQVEVIKNSRSGMPNFESQEIEANDLQAAVAQYFQ 278

Query: 541  SRGA-KTSPDRNTRYGIAKEQTESSSTKAWLEKMKTLFISKGSGFSSRSVITGDPYKGVG 717
             RG  K S D +TR+G+ KE   +SSTKAWLEKMKTLFI KGSGFSSRSVITGD +KGV 
Sbjct: 279  FRGTGKASRDVDTRFGVNKE-INASSTKAWLEKMKTLFIRKGSGFSSRSVITGDSFKGVS 337

Query: 718  EIGIPFEIAQRITFEERVTEYNMKSLQKLVDDKLCLTYRDGQSTYSLREGSKGHTFLKPG 897
            EIG+PFEIAQ+ITFEERV ++NM+ LQ+LVD+KLCLTYRDG STYSLREGSKGHTFLKPG
Sbjct: 338  EIGLPFEIAQKITFEERVNQHNMEYLQRLVDEKLCLTYRDGMSTYSLREGSKGHTFLKPG 397

Query: 898  QVVHRKIMEGDVIFINRPPTTHKHSLQALSVYIHEDHTFKINPLICGPLSADFDGDCIHI 1077
            Q+VHR+IM+GD++FINRPPTTHKHSLQALSVYIH+DHT KINPLICGPLSADFDGDCIH+
Sbjct: 398  QIVHRRIMDGDIVFINRPPTTHKHSLQALSVYIHDDHTVKINPLICGPLSADFDGDCIHL 457

Query: 1078 FYPQSPDAKAEVLELFAVEKQLLSSHSGHVNLQLGTDSVLSXXXXXXXXXXXXAEVQQXX 1257
            FYPQS +AKAEV+ELF+VEKQLLSSH+G+ NLQLG DS+LS            A  QQ  
Sbjct: 458  FYPQSLEAKAEVVELFSVEKQLLSSHTGNFNLQLGMDSLLSLKLIFQNYYLSKAAAQQLA 517

Query: 1258 XXXXXXXXXXXXXXVRDSGPVWTVLELLETSLPRGFDCNGDKFVIRDSKILKLDYSRDXX 1437
                             +GP+WT  ++L+ +LP  FDC+G++  I  S++L++D++RD  
Sbjct: 518  MVSPNSLPGPAVLKSCKAGPLWTAAQILQITLPHEFDCSGERHTICKSELLRIDFNRDVM 577

Query: 1438 XXXXXXXXXXXFFTKGPNEVLKLFNSLQPLLMENLSKEGFNISLEDFIIPKPXXXXXXXX 1617
                       FF KGP  VL  FNSLQPLLMENL  EGF++SL D  IP          
Sbjct: 578  QSIVNDLVTSIFFLKGPKAVLGFFNSLQPLLMENLYSEGFSVSLRDLFIPGDILKNIQVD 637

Query: 1618 XXXXXXXXRHLRKNYNEVIALQVDKRLRLVKNPISDFILRYSSMGNLIDVKSDSAVTKIV 1797
                    R L   Y+E IALQ++  LR +K P++DFIL  S++G+L+D KS+SA++K+V
Sbjct: 638  IQKISRLLRDLNACYSESIALQLENYLRSMKKPVTDFILGSSAIGHLVDSKSESALSKVV 697

Query: 1798 QQIGFLGLQILEKGRLYSKTLAEDLSIHFLGNYPFPDDYPYEEFGLVRNGLFHGLDPYQE 1977
            QQIGFLGLQ+ ++G+ Y+ TL   +S  F   YP  D+YP E++GLV   LF GLDPYQE
Sbjct: 698  QQIGFLGLQLADRGKFYTGTLVNAMSSLFQNKYPSSDNYPTEKYGLVGRPLFQGLDPYQE 757

Query: 1978 MVHSICNREQMVRSSRGLTEPGTLFKNSMAILRDVVICYDGTVRNVCSNSIIQFEYGGVT 2157
            MVHSI +RE +VRSSRGLTEPGTLFKN MA+LRDV+IC+DGTVRN+CSNSIIQFEYG  +
Sbjct: 758  MVHSISSREVIVRSSRGLTEPGTLFKNLMAVLRDVMICHDGTVRNMCSNSIIQFEYGVNS 817

Query: 2158 HNF---FAAGEPVGVLAATAMSNPAYKAVLDSSPNSNSSWDMMKEILFCGVNFKNVHNDR 2328
             N    FA G+PVGVLAATAMSNPAYKAVLDSSP+SNSSW+MMKEIL CGVNFKN  +DR
Sbjct: 818  ANIASEFATGDPVGVLAATAMSNPAYKAVLDSSPSSNSSWEMMKEILLCGVNFKNDSSDR 877

Query: 2329 RVVLYLNACDCGAKYCLENAAYLVKNHLRKVSLKDVALEFLIEYDRKQVAVDNA-IDAGL 2505
            RV+LYLN CDCG K+C ENAA +VKNHL KVSLK+ +++FLIEY R + A D++ I AGL
Sbjct: 878  RVMLYLNDCDCGRKHCQENAACVVKNHLAKVSLKESSVDFLIEYKRSETAGDSSEIGAGL 937

Query: 2506 VGHVHLNKALLEESKISMEEILTKCEESLNSFRKKKKVGQLFKKIALDCSE-CSFNQSSK 2682
            VGH+HLNK  L++S ISM +IL KC++++N  RKKKKVG LFK+I L  S  CSF  S++
Sbjct: 938  VGHIHLNKTQLKQSNISMNDILEKCQDTINLCRKKKKVGNLFKRIDLSFSNCCSFCHSAE 997

Query: 2683 SNW--TPCLKFFWQDTPDIHLEKTAHIFADAVCPVLLNAIIKGDPRVKEANITWISPETT 2856
            S W  TPCL+F W    D HLE+ +HI AD VCPVLL  IIKGDP V   NI WI+ + T
Sbjct: 998  SKWTDTPCLQFLWIGANDDHLERISHILADTVCPVLLETIIKGDPMVSTVNIIWINSDAT 1057

Query: 2857 GWIGNPSKEQKGELAINVVLEKEAVKKNGDAWRTVMDSCLPIIHLIDTTRSIPYAIKQVE 3036
              I +PSK QKGELA++++LEK+AV+K+GDAWR +MDSCLP+IHLIDT RSIPYAIKQV+
Sbjct: 1058 S-IRSPSKSQKGELALDIILEKKAVRKSGDAWRVLMDSCLPVIHLIDTKRSIPYAIKQVQ 1116

Query: 3037 NLLGIACTFEQAIQRLSTSVSMVTKGMLKEHLLLLASSMTCAGILVGFNQAGIKALSKAL 3216
             LLGI+C FEQA+QRLSTSV+MVTKG+LK+HLLLLA+SMTC G L+GFN  GIK+LS++L
Sbjct: 1117 ELLGISCAFEQAVQRLSTSVTMVTKGVLKDHLLLLANSMTCGGNLIGFNAGGIKSLSRSL 1176

Query: 3217 NFQAPFSEATVYTPKKCFEKAAEKCHADSLSSIVGACSWGKPVAVGTGSRFDILWDTREV 3396
            N Q PF+EAT++TP+KCFE+AAEKCH D+L+SIV +CSWGK V+VGTGS F+ILWDTR+ 
Sbjct: 1177 NLQVPFTEATLFTPRKCFERAAEKCHVDALTSIVASCSWGKHVSVGTGSPFEILWDTRKA 1236

Query: 3397 ELNQKDGIDVYNFLNLVRGVS-EEEADNECLGGDLDYYELEDNYMEAG-SPELESGSAKP 3570
            ELNQ++G++VY+FL+LV   S +E+    CLG ++DY + ED YME   SP  +SG+ KP
Sbjct: 1237 ELNQQNGLNVYDFLHLVSSSSNKEDMGTSCLGEEIDYLDQEDEYMEFDLSPVRDSGTEKP 1296

Query: 3571 VFEDGLDLNIDEMDVDRTGGKSTWESGPAPEDXXXXXXXXXXXXXXXXXXXXXXXSDKDL 3750
             FEDG     DE         + W      +                          KD 
Sbjct: 1297 TFEDGNSFAPDE---------NEWVQTSTTDKDSGSWDQVKKAESPTLSGWGVEKDGKDA 1347

Query: 3751 QETGSWG-----------GWGANKSQEDVVPSE---PWGK--KNDDSAAGGGW---GTKN 3873
               GSWG           GWG +KS++D   +     W +  +   S    GW     + 
Sbjct: 1348 NLDGSWGQALEKVQSSTPGWGVDKSEKDGKDANLNGSWAQAVEKVQSPTTTGWRLDKCEK 1407

Query: 3874 SDTNTEK---------GSSWGHKA--------AKADETGWGSNN 3954
             DT +EK          S+WG K          KA+++ W S N
Sbjct: 1408 HDTFSEKEQEYYPKDNRSAWGKKVDSVEKDRIEKAEKSTWASAN 1451


>ref|XP_018849434.1| PREDICTED: DNA-directed RNA polymerase V subunit 1 isoform X2
            [Juglans regia]
          Length = 1840

 Score = 1537 bits (3979), Expect = 0.0
 Identities = 792/1327 (59%), Positives = 974/1327 (73%), Gaps = 12/1327 (0%)
 Frame = +1

Query: 1    CLKFKSKRPQAKSIGVLERAFTACCEDAAQVTVNEAKTADGACYLELKVPSRSRRDGIWD 180
            CLK K  +   KS G+ ER  ++CCED+ QV++ E KT DGACYLELK+P RS R+G W+
Sbjct: 9    CLKMKRNKVPLKSAGLAERLLSSCCEDSPQVSIREVKTTDGACYLELKLPQRSLRNGSWN 68

Query: 181  FLDRYGYHYGDGIARPLLPSEVLIILKKIPDATKKKLAGRGCFFQEGYIMQHLPVPPNCL 360
            FL+ YG+ YGD + R LLP EV  +LK+IP+ T+KKL+G+G F QEGYI+++LPVPPNCL
Sbjct: 69   FLEIYGFRYGDDLCRTLLPCEVKKMLKRIPEETRKKLSGKGYFPQEGYILKYLPVPPNCL 128

Query: 361  STPDVSDGISVMSSDISMTMLKKVLRQVEIIKSSRSGHPNFESLEVEVNDLQAAVAQYLQ 540
            S P++SDG+SVMSSD S+ MLKKVLRQVEIIKSSRSG PNFES EVE N+LQ+A+ QYLQ
Sbjct: 129  SVPEISDGVSVMSSDPSLVMLKKVLRQVEIIKSSRSGTPNFESHEVEANELQSAINQYLQ 188

Query: 541  SRGA-KTSPDRNTRYGIAKEQTESSSTKAWLEKMKTLFISKGSGFSSRSVITGDPYKGVG 717
             RG+ K S D ++R+G++KE  +S+ TKAWLEK++TLFI KGSGFSSRSVITGD YK V 
Sbjct: 189  IRGSVKASRDIDSRFGLSKEPNDST-TKAWLEKIRTLFIRKGSGFSSRSVITGDAYKRVD 247

Query: 718  EIGIPFEIAQRITFEERVTEYNMKSLQKLVDDKLCLTYRDGQSTYSLREGSKGHTFLKPG 897
            EIGIPFEIAQ ITFEE+V  +N+K LQ+LVD+KLCLTYRDG S YSLREGSKGHTFL+PG
Sbjct: 248  EIGIPFEIAQMITFEEKVNVHNLKYLQELVDNKLCLTYRDGSSAYSLREGSKGHTFLRPG 307

Query: 898  QVVHRKIMEGDVIFINRPPTTHKHSLQALSVYIHEDHTFKINPLICGPLSADFDGDCIHI 1077
            QVVHR+IM+GD++FINRPPTTHKHSLQAL+VY+H+DHT KINPLICGPLSADFDGDC+H+
Sbjct: 308  QVVHRRIMDGDMVFINRPPTTHKHSLQALAVYVHDDHTVKINPLICGPLSADFDGDCVHL 367

Query: 1078 FYPQSPDAKAEVLELFAVEKQLLSSHSGHVNLQLGTDSVLSXXXXXXXXXXXXAEVQQXX 1257
            FYPQS  AKAEVLELF+V+KQLLSSHSG +NLQL TDS+LS            +  QQ  
Sbjct: 368  FYPQSLAAKAEVLELFSVDKQLLSSHSGKINLQLATDSLLSLKTMFKTYFLDRSAAQQLA 427

Query: 1258 XXXXXXXXXXXXXXVRDSGPVWTVLELLETSLPRGFDCNGDKFVIRDSKILKLDYSRDXX 1437
                          V  + P WT L++L+T+LP  FDC G+ ++I  S +LK+D++ D  
Sbjct: 428  MFASSSLPRPALLKVHSAAPYWTALQILQTALPACFDCCGETYLISQSDVLKIDFNGDVI 487

Query: 1438 XXXXXXXXXXXFFTKGPNEVLKLFNSLQPLLMENLSKEGFNISLEDFIIPKPXXXXXXXX 1617
                       FF KGP EVLK FNSLQPLLMEN+  EGF++ L DF I +         
Sbjct: 488  SSVVNEIVTSIFFEKGPEEVLKFFNSLQPLLMENIFAEGFSVGLNDFSINREDIQNIQKN 547

Query: 1618 XXXXXXXXRHLRKNYNEVIALQVDKRLRLVKNPISDFILRYSSMGNLIDVKSDSAVTKIV 1797
                     HLR+ YNE++ LQ++ R++ VK P+++FIL+ S++G+L+D K+DSA+ K+V
Sbjct: 548  IQSISPLLYHLRETYNELVELQLENRIKDVKVPVTNFILK-SALGDLMDSKNDSAINKVV 606

Query: 1798 QQIGFLGLQILEKGRLYSKTLAEDLSIHFLGNYPFPDDYPYEEFGLVRNGLFHGLDPYQE 1977
            QQIGFLGLQ+ +KG+ YSKTL ED++  F   Y    DYP  E+GLV+N  FHGLDPY+E
Sbjct: 607  QQIGFLGLQLSDKGKFYSKTLVEDVAALFRCKYSSGVDYPSAEYGLVQNCFFHGLDPYEE 666

Query: 1978 MVHSICNREQMVRSSRGLTEPGTLFKNSMAILRDVVICYDGTVRNVCSNSIIQFEYG--- 2148
            +VHSI  RE MVRSSRGL+EPGTLFKN MAILRDVVICYDGTVRNV SNSIIQF+YG   
Sbjct: 667  IVHSISTREVMVRSSRGLSEPGTLFKNLMAILRDVVICYDGTVRNVSSNSIIQFDYGVNA 726

Query: 2149 -GVTHNFFAAGEPVGVLAATAMSNPAYKAVLDSSPNSNSSWDMMKEILFCGVNFKNVHND 2325
             G  +N F AGEPVGVLAATAMSNPAYKAVLDSSP+SNSSW++MKEIL C V FKN   D
Sbjct: 727  RGKPNNLFPAGEPVGVLAATAMSNPAYKAVLDSSPSSNSSWELMKEILLCKVIFKNELID 786

Query: 2326 RRVVLYLNACDCGAKYCLENAAYLVKNHLRKVSLKDVALEFLIEY-DRKQVAVDNAIDAG 2502
            RRVVLYLN C CG K C E AAYLVKN L+KVSLKD A+EFLIEY D++ VA  + IDAG
Sbjct: 787  RRVVLYLNECGCGRKCCREKAAYLVKNQLKKVSLKDTAVEFLIEYKDQQNVAESSEIDAG 846

Query: 2503 LVGHVHLNKALLEESKISMEEILTKCEESLNSFRKKKKVGQLFKKIALDCSEC-SFNQ-- 2673
            LVGHVHLN+ LL E   SM ++L KC+E+L+SFRKKKKV  +FKK  L  SEC SF Q  
Sbjct: 847  LVGHVHLNEMLLGEMNTSMHDVLQKCQETLSSFRKKKKVSHVFKKTILSISECCSFQQCG 906

Query: 2674 SSKSNWTPCLKFFWQDTPDIHLEKTAHIFADAVCPVLLNAIIKGDPRVKEANITWISPET 2853
            +++S+  PCL F W DT DI+LE+TA+I AD +CPVLL  IIKGDPRV  ANI WI+P T
Sbjct: 907  ANRSSGIPCLMFSWPDTSDIYLERTANILADIICPVLLETIIKGDPRVCSANIIWINPGT 966

Query: 2854 TGWIGNPSKEQKGELAINVVLEKEAVKKNGDAWRTVMDSCLPIIHLIDTTRSIPYAIKQV 3033
            T WI NP K +KGELA+++VLEK AVK++GDAWR V+D CLP++HLIDT RSIPYAIKQ+
Sbjct: 967  TTWIRNPCKSEKGELALDIVLEKSAVKQSGDAWRIVLDCCLPVLHLIDTRRSIPYAIKQL 1026

Query: 3034 ENLLGIACTFEQAIQRLSTSVSMVTKGMLKEHLLLLASSMTCAGILVGFNQAGIKALSKA 3213
            + LLGI+C F+QA+QRL+TSV+MV KG+LKEHL+LLA+SMTCAG LVGFN  G KALS++
Sbjct: 1027 QELLGISCAFDQAVQRLATSVTMVAKGVLKEHLILLANSMTCAGNLVGFNSGGYKALSRS 1086

Query: 3214 LNFQAPFSEATVYTPKKCFEKAAEKCHADSLSSIVGACSWGKPVAVGTGSRFDILWDTRE 3393
             N QAPF+EAT++TP+ CFE++AEK H DSLSSIV +CSWGK VAVGTGSRFD+LWDTR+
Sbjct: 1087 FNVQAPFAEATLFTPRNCFERSAEKRHVDSLSSIVASCSWGKHVAVGTGSRFDVLWDTRQ 1146

Query: 3394 VELNQKDGIDVYNFLNLVRGVSE-EEADNECLGGDLDYYELEDNYME-AGSPELESGSAK 3567
            V LN++ GIDVYNFL++VRG +  EE++  CLG D D   LED   E A SPE  S   K
Sbjct: 1147 VGLNEEGGIDVYNFLHMVRGAANGEESNTGCLGADTDDLMLEDECAEWAPSPEHNSSFDK 1206

Query: 3568 PVFEDGLDLNIDEMDVDRTGGKSTWESGPAPEDXXXXXXXXXXXXXXXXXXXXXXXSDKD 3747
            P FED  +    E  +D    +STW++  +                           DK 
Sbjct: 1207 PFFEDSAEF---ENCLDNRPEESTWDASTS--------------------------WDKQ 1237

Query: 3748 LQETGSWGGWGANKSQEDVVPSEPWGKKNDDSAAGGGWGTKNSDTNTEKGSSW-GHKAAK 3924
            +    +  GWG NK++   V ++P      DS+   GWG           + W  + A K
Sbjct: 1238 MTRENASSGWGTNKAEPGDVSTKP----AMDSSKSSGWGA---------SAGWENNTATK 1284

Query: 3925 ADETGWG 3945
             D +GWG
Sbjct: 1285 NDSSGWG 1291


>ref|XP_018849433.1| PREDICTED: DNA-directed RNA polymerase V subunit 1 isoform X1
            [Juglans regia]
          Length = 1932

 Score = 1537 bits (3979), Expect = 0.0
 Identities = 792/1327 (59%), Positives = 974/1327 (73%), Gaps = 12/1327 (0%)
 Frame = +1

Query: 1    CLKFKSKRPQAKSIGVLERAFTACCEDAAQVTVNEAKTADGACYLELKVPSRSRRDGIWD 180
            CLK K  +   KS G+ ER  ++CCED+ QV++ E KT DGACYLELK+P RS R+G W+
Sbjct: 101  CLKMKRNKVPLKSAGLAERLLSSCCEDSPQVSIREVKTTDGACYLELKLPQRSLRNGSWN 160

Query: 181  FLDRYGYHYGDGIARPLLPSEVLIILKKIPDATKKKLAGRGCFFQEGYIMQHLPVPPNCL 360
            FL+ YG+ YGD + R LLP EV  +LK+IP+ T+KKL+G+G F QEGYI+++LPVPPNCL
Sbjct: 161  FLEIYGFRYGDDLCRTLLPCEVKKMLKRIPEETRKKLSGKGYFPQEGYILKYLPVPPNCL 220

Query: 361  STPDVSDGISVMSSDISMTMLKKVLRQVEIIKSSRSGHPNFESLEVEVNDLQAAVAQYLQ 540
            S P++SDG+SVMSSD S+ MLKKVLRQVEIIKSSRSG PNFES EVE N+LQ+A+ QYLQ
Sbjct: 221  SVPEISDGVSVMSSDPSLVMLKKVLRQVEIIKSSRSGTPNFESHEVEANELQSAINQYLQ 280

Query: 541  SRGA-KTSPDRNTRYGIAKEQTESSSTKAWLEKMKTLFISKGSGFSSRSVITGDPYKGVG 717
             RG+ K S D ++R+G++KE  +S+ TKAWLEK++TLFI KGSGFSSRSVITGD YK V 
Sbjct: 281  IRGSVKASRDIDSRFGLSKEPNDST-TKAWLEKIRTLFIRKGSGFSSRSVITGDAYKRVD 339

Query: 718  EIGIPFEIAQRITFEERVTEYNMKSLQKLVDDKLCLTYRDGQSTYSLREGSKGHTFLKPG 897
            EIGIPFEIAQ ITFEE+V  +N+K LQ+LVD+KLCLTYRDG S YSLREGSKGHTFL+PG
Sbjct: 340  EIGIPFEIAQMITFEEKVNVHNLKYLQELVDNKLCLTYRDGSSAYSLREGSKGHTFLRPG 399

Query: 898  QVVHRKIMEGDVIFINRPPTTHKHSLQALSVYIHEDHTFKINPLICGPLSADFDGDCIHI 1077
            QVVHR+IM+GD++FINRPPTTHKHSLQAL+VY+H+DHT KINPLICGPLSADFDGDC+H+
Sbjct: 400  QVVHRRIMDGDMVFINRPPTTHKHSLQALAVYVHDDHTVKINPLICGPLSADFDGDCVHL 459

Query: 1078 FYPQSPDAKAEVLELFAVEKQLLSSHSGHVNLQLGTDSVLSXXXXXXXXXXXXAEVQQXX 1257
            FYPQS  AKAEVLELF+V+KQLLSSHSG +NLQL TDS+LS            +  QQ  
Sbjct: 460  FYPQSLAAKAEVLELFSVDKQLLSSHSGKINLQLATDSLLSLKTMFKTYFLDRSAAQQLA 519

Query: 1258 XXXXXXXXXXXXXXVRDSGPVWTVLELLETSLPRGFDCNGDKFVIRDSKILKLDYSRDXX 1437
                          V  + P WT L++L+T+LP  FDC G+ ++I  S +LK+D++ D  
Sbjct: 520  MFASSSLPRPALLKVHSAAPYWTALQILQTALPACFDCCGETYLISQSDVLKIDFNGDVI 579

Query: 1438 XXXXXXXXXXXFFTKGPNEVLKLFNSLQPLLMENLSKEGFNISLEDFIIPKPXXXXXXXX 1617
                       FF KGP EVLK FNSLQPLLMEN+  EGF++ L DF I +         
Sbjct: 580  SSVVNEIVTSIFFEKGPEEVLKFFNSLQPLLMENIFAEGFSVGLNDFSINREDIQNIQKN 639

Query: 1618 XXXXXXXXRHLRKNYNEVIALQVDKRLRLVKNPISDFILRYSSMGNLIDVKSDSAVTKIV 1797
                     HLR+ YNE++ LQ++ R++ VK P+++FIL+ S++G+L+D K+DSA+ K+V
Sbjct: 640  IQSISPLLYHLRETYNELVELQLENRIKDVKVPVTNFILK-SALGDLMDSKNDSAINKVV 698

Query: 1798 QQIGFLGLQILEKGRLYSKTLAEDLSIHFLGNYPFPDDYPYEEFGLVRNGLFHGLDPYQE 1977
            QQIGFLGLQ+ +KG+ YSKTL ED++  F   Y    DYP  E+GLV+N  FHGLDPY+E
Sbjct: 699  QQIGFLGLQLSDKGKFYSKTLVEDVAALFRCKYSSGVDYPSAEYGLVQNCFFHGLDPYEE 758

Query: 1978 MVHSICNREQMVRSSRGLTEPGTLFKNSMAILRDVVICYDGTVRNVCSNSIIQFEYG--- 2148
            +VHSI  RE MVRSSRGL+EPGTLFKN MAILRDVVICYDGTVRNV SNSIIQF+YG   
Sbjct: 759  IVHSISTREVMVRSSRGLSEPGTLFKNLMAILRDVVICYDGTVRNVSSNSIIQFDYGVNA 818

Query: 2149 -GVTHNFFAAGEPVGVLAATAMSNPAYKAVLDSSPNSNSSWDMMKEILFCGVNFKNVHND 2325
             G  +N F AGEPVGVLAATAMSNPAYKAVLDSSP+SNSSW++MKEIL C V FKN   D
Sbjct: 819  RGKPNNLFPAGEPVGVLAATAMSNPAYKAVLDSSPSSNSSWELMKEILLCKVIFKNELID 878

Query: 2326 RRVVLYLNACDCGAKYCLENAAYLVKNHLRKVSLKDVALEFLIEY-DRKQVAVDNAIDAG 2502
            RRVVLYLN C CG K C E AAYLVKN L+KVSLKD A+EFLIEY D++ VA  + IDAG
Sbjct: 879  RRVVLYLNECGCGRKCCREKAAYLVKNQLKKVSLKDTAVEFLIEYKDQQNVAESSEIDAG 938

Query: 2503 LVGHVHLNKALLEESKISMEEILTKCEESLNSFRKKKKVGQLFKKIALDCSEC-SFNQ-- 2673
            LVGHVHLN+ LL E   SM ++L KC+E+L+SFRKKKKV  +FKK  L  SEC SF Q  
Sbjct: 939  LVGHVHLNEMLLGEMNTSMHDVLQKCQETLSSFRKKKKVSHVFKKTILSISECCSFQQCG 998

Query: 2674 SSKSNWTPCLKFFWQDTPDIHLEKTAHIFADAVCPVLLNAIIKGDPRVKEANITWISPET 2853
            +++S+  PCL F W DT DI+LE+TA+I AD +CPVLL  IIKGDPRV  ANI WI+P T
Sbjct: 999  ANRSSGIPCLMFSWPDTSDIYLERTANILADIICPVLLETIIKGDPRVCSANIIWINPGT 1058

Query: 2854 TGWIGNPSKEQKGELAINVVLEKEAVKKNGDAWRTVMDSCLPIIHLIDTTRSIPYAIKQV 3033
            T WI NP K +KGELA+++VLEK AVK++GDAWR V+D CLP++HLIDT RSIPYAIKQ+
Sbjct: 1059 TTWIRNPCKSEKGELALDIVLEKSAVKQSGDAWRIVLDCCLPVLHLIDTRRSIPYAIKQL 1118

Query: 3034 ENLLGIACTFEQAIQRLSTSVSMVTKGMLKEHLLLLASSMTCAGILVGFNQAGIKALSKA 3213
            + LLGI+C F+QA+QRL+TSV+MV KG+LKEHL+LLA+SMTCAG LVGFN  G KALS++
Sbjct: 1119 QELLGISCAFDQAVQRLATSVTMVAKGVLKEHLILLANSMTCAGNLVGFNSGGYKALSRS 1178

Query: 3214 LNFQAPFSEATVYTPKKCFEKAAEKCHADSLSSIVGACSWGKPVAVGTGSRFDILWDTRE 3393
             N QAPF+EAT++TP+ CFE++AEK H DSLSSIV +CSWGK VAVGTGSRFD+LWDTR+
Sbjct: 1179 FNVQAPFAEATLFTPRNCFERSAEKRHVDSLSSIVASCSWGKHVAVGTGSRFDVLWDTRQ 1238

Query: 3394 VELNQKDGIDVYNFLNLVRGVSE-EEADNECLGGDLDYYELEDNYME-AGSPELESGSAK 3567
            V LN++ GIDVYNFL++VRG +  EE++  CLG D D   LED   E A SPE  S   K
Sbjct: 1239 VGLNEEGGIDVYNFLHMVRGAANGEESNTGCLGADTDDLMLEDECAEWAPSPEHNSSFDK 1298

Query: 3568 PVFEDGLDLNIDEMDVDRTGGKSTWESGPAPEDXXXXXXXXXXXXXXXXXXXXXXXSDKD 3747
            P FED  +    E  +D    +STW++  +                           DK 
Sbjct: 1299 PFFEDSAEF---ENCLDNRPEESTWDASTS--------------------------WDKQ 1329

Query: 3748 LQETGSWGGWGANKSQEDVVPSEPWGKKNDDSAAGGGWGTKNSDTNTEKGSSW-GHKAAK 3924
            +    +  GWG NK++   V ++P      DS+   GWG           + W  + A K
Sbjct: 1330 MTRENASSGWGTNKAEPGDVSTKP----AMDSSKSSGWGA---------SAGWENNTATK 1376

Query: 3925 ADETGWG 3945
             D +GWG
Sbjct: 1377 NDSSGWG 1383


>gb|PIN04981.1| RNA polymerase II, large subunit [Handroanthus impetiginosus]
          Length = 2079

 Score = 1536 bits (3977), Expect = 0.0
 Identities = 788/1339 (58%), Positives = 985/1339 (73%), Gaps = 24/1339 (1%)
 Frame = +1

Query: 1    CLKFKSKRPQAKSIGVLERAFTACCEDAAQVTVNEAKTADGACYLELKVPSRSR-RDGIW 177
            CLKFK+++   K+IG++ER  +ACCED  Q+++NEAKT DGA YLELKVPSRSR RDGIW
Sbjct: 101  CLKFKNRK--VKNIGLVERVLSACCEDTLQISINEAKTTDGASYLELKVPSRSRARDGIW 158

Query: 178  DFLDRYGYHYGDGIARPLLPSEVLIILKKIPDATKKKLAGRGCFFQEGYIMQHLPVPPNC 357
            +FL+RYG+ YGD  +RPLLPSEV+ IL+K+P  T+KKL+ +G F Q+GYI+Q+LPVPPNC
Sbjct: 159  NFLERYGFRYGDTYSRPLLPSEVMAILRKLPQETRKKLSAKGYFPQDGYIIQYLPVPPNC 218

Query: 358  LSTPDVSDGISVMSSDISMTMLKKVLRQVEIIKSSRSGHPNFESLEVEVNDLQAAVAQYL 537
            LS PD+SDGIS MSSD S+T+LKKVLRQVEIIK+SRSG PNFES E+E NDLQAAVAQYL
Sbjct: 219  LSVPDISDGISTMSSDYSITLLKKVLRQVEIIKNSRSGMPNFESQEIEANDLQAAVAQYL 278

Query: 538  QSRGA-KTSPDRNTRYGIAKEQTESSSTKAWLEKMKTLFISKGSGFSSRSVITGDPYKGV 714
            Q RG  K S D +TR+G+ KE+  +SSTKAWLEKMKT FI KGSGFSSRSVITGDP+KGV
Sbjct: 279  QFRGTGKASRDVDTRFGVNKEEN-ASSTKAWLEKMKTFFIRKGSGFSSRSVITGDPFKGV 337

Query: 715  GEIGIPFEIAQRITFEERVTEYNMKSLQKLVDDKLCLTYRDGQSTYSLREGSKGHTFLKP 894
             EIG+PFEIAQ+ITFEERV ++NM  LQKLVD+KLCLTYRDG STYSLREGSKGHTFL+P
Sbjct: 338  SEIGLPFEIAQKITFEERVNQHNMAFLQKLVDEKLCLTYRDGHSTYSLREGSKGHTFLRP 397

Query: 895  GQVVHRKIMEGDVIFINRPPTTHKHSLQALSVYIHEDHTFKINPLICGPLSADFDGDCIH 1074
            GQVVHR+IM+GD++FINRPPTTHKHSLQALSVY+H+DHT KINPLIC PLSADFDGDCIH
Sbjct: 398  GQVVHRRIMDGDIVFINRPPTTHKHSLQALSVYVHDDHTVKINPLICSPLSADFDGDCIH 457

Query: 1075 IFYPQSPDAKAEVLELFAVEKQLLSSHSGHVNLQLGTDSVLSXXXXXXXXXXXXAEVQQX 1254
            +FYPQS +AKAEV+ELF+VEKQLLSSH+G+ NLQL TDS+LS            AE QQ 
Sbjct: 458  LFYPQSLEAKAEVVELFSVEKQLLSSHTGNFNLQLATDSLLSLKILFRKYFLSKAEAQQL 517

Query: 1255 XXXXXXXXXXXXXXXVRDSGPVWTVLELLETSLPRGFDCNGDKFVIRDSKILKLDYSRDX 1434
                             + GP+WT  ++L+T+LP  FDC G++ +I  S++L LD++RD 
Sbjct: 518  TMFLPNVLPRPAVMK-SERGPLWTASQILQTTLPPSFDCAGERHIISKSEVLSLDFNRDV 576

Query: 1435 XXXXXXXXXXXXFFTKGPNEVLKLFNSLQPLLMENLSKEGFNISLEDFIIPKPXXXXXXX 1614
                        FF KGP EVL+ FNS+QPLLME+L  EGF++SL D  +P+        
Sbjct: 577  MASIGNDIVTSLFFLKGPKEVLRFFNSIQPLLMESLYSEGFSVSLRDLFLPRDVLESIQE 636

Query: 1615 XXXXXXXXXRHLRKNYNEVIALQVDKRLRLVKNPISDFILRYSSMGNLIDVKSDSAVTKI 1794
                      HLR +Y+E IALQ++  LR VK P ++FIL+ S +G+LID KS+SA++K+
Sbjct: 637  NIQKIFPLLYHLRTSYSESIALQLESYLRSVKIPATNFILKSSGIGHLIDSKSESALSKV 696

Query: 1795 VQQIGFLGLQILEKGRLYSKTLAEDLSIHFLGNYPFPDDYPYEEFGLVRNGLFHGLDPYQ 1974
            VQQIGFLG+QI ++G+ Y++TL +D+S  F   YP  DDYP E+FGLV   LF GL+PYQ
Sbjct: 697  VQQIGFLGMQISDRGKFYTETLVKDMSSLFQKKYPSCDDYPTEKFGLVGGPLFRGLNPYQ 756

Query: 1975 EMVHSICNREQMVRSSRGLTEPGTLFKNSMAILRDVVICYDGTVRNVCSNSIIQFEYGGV 2154
            EMVH++ +RE +VRS+RGLTEPGTLFKN MAILRDVVICYDGTVRN+CSNSIIQFEYG  
Sbjct: 757  EMVHAVSSREVIVRSTRGLTEPGTLFKNLMAILRDVVICYDGTVRNMCSNSIIQFEYGVN 816

Query: 2155 THNF---FAAGEPVGVLAATAMSNPAYKAVLDSSPNSNSSWDMMKEILFCGVNFKNVHND 2325
            + N    F AG+PVGVLAATAMSNPAYKAVLDSSP+SNSSW+MMKEIL CGV+FKN  +D
Sbjct: 817  SANIASEFCAGDPVGVLAATAMSNPAYKAVLDSSPSSNSSWEMMKEILLCGVSFKNDISD 876

Query: 2326 RRVVLYLNACDCGAKYCLENAAYLVKNHLRKVSLKDVALEFLIEYDRKQVAVDNAIDAGL 2505
            RRV+LYLN CDCG K+C E+AA +VKN L+KVSLKD A+EFLIEY  + +   + I+AGL
Sbjct: 877  RRVILYLNNCDCGRKHCQESAALVVKNQLKKVSLKDTAIEFLIEYRSQIMHESSEINAGL 936

Query: 2506 VGHVHLNKALLEESKISMEEILTKCEESLNSFRKKKKVGQLFKKIALDCSE-CSFNQSSK 2682
            VGH+HLNK  + +  +++ ++L KCE+ ++  +KKKKVG +FK+I L  S+ CSF QSSK
Sbjct: 937  VGHIHLNKTQMIQLNVNLRDVLEKCEDIIHLHQKKKKVGNIFKRIDLSFSDSCSFCQSSK 996

Query: 2683 SNWT--PCLKFFWQDTPDIHLEKTAHIFADAVCPVLLNAIIKGDPRVKEANITWISPETT 2856
            S WT  PC++F WQ   D   E+ +H  AD V PVLL  IIKGDPRV  A + W+SP+T 
Sbjct: 997  SKWTDVPCIQFLWQGVNDDLFERASHFLADTVYPVLLQTIIKGDPRVASAKVVWVSPDTA 1056

Query: 2857 GWIGNPSKEQKGELAINVVLEKEAVKKNGDAWRTVMDSCLPIIHLIDTTRSIPYAIKQVE 3036
             WI +PSK  KGELA++V LEKEAVKK+GDAWR VMDSCLP+IHLIDT RSIPYAIKQV+
Sbjct: 1057 TWIRSPSKNLKGELALDVTLEKEAVKKSGDAWRIVMDSCLPVIHLIDTRRSIPYAIKQVQ 1116

Query: 3037 NLLGIACTFEQAIQRLSTSVSMVTKGMLKEHLLLLASSMTCAGILVGFNQAGIKALSKAL 3216
             LLGI+C FEQA+QRLSTSV+MVTKG+LK+HLLLL +SMTCAG L+GFN  GIK+LSK+L
Sbjct: 1117 ELLGISCAFEQAVQRLSTSVTMVTKGVLKDHLLLLGNSMTCAGTLIGFNAGGIKSLSKSL 1176

Query: 3217 NFQAPFSEATVYTPKKCFEKAAEKCHADSLSSIVGACSWGKPVAVGTGSRFDILWDTREV 3396
            + Q PF  AT++TP+KCFE+AAEKCHAD+LSSIV +C+WGK V+VGTGS F+ILWDTR+ 
Sbjct: 1177 SVQVPFMSATLFTPRKCFERAAEKCHADNLSSIVASCAWGKHVSVGTGSPFEILWDTRKA 1236

Query: 3397 ELNQKDGIDVYNFLNLVRGVSE-EEADNECLGGDLDYYELEDNYMEAGSPELESGSAKPV 3573
            +L     IDVY+FL+L+   S+ E+     LG ++D ++ ED +ME     +   + KP 
Sbjct: 1237 DLKPHKEIDVYDFLHLMNSSSKPEDMGTSWLGAEIDDFDQEDEFMECDLSPVREDADKPT 1296

Query: 3574 FEDGLDLNIDEMD------VDRTGGKSTWESGPAPEDXXXXXXXXXXXXXXXXXXXXXXX 3735
            FEDG++L ++  D      V     +++W S     D                       
Sbjct: 1297 FEDGVELGLNGDDNDGWSNVGAMESQTSWSSWGKKVDSEENDWTNKADQSTNQAVSEVND 1356

Query: 3736 SDKDLQETGSWGGWGANKSQEDVVPSEPWGKKNDDSAAGGGWGTKNSD-TNTEKGSSWGH 3912
              K  +E+ SW    AN  Q D      W  K ++S  G    ++ +D     + S+WG 
Sbjct: 1357 LAKKSEES-SWDR-KANSQQND------WTTKPEESTWGKQANSQENDWVKKPEESTWGK 1408

Query: 3913 KA--------AKADETGWG 3945
            KA         K +E+ WG
Sbjct: 1409 KANSEENNWVKKPEESAWG 1427


>ref|XP_020554889.1| DNA-directed RNA polymerase V subunit 1 [Sesamum indicum]
          Length = 2106

 Score = 1536 bits (3976), Expect = 0.0
 Identities = 803/1363 (58%), Positives = 993/1363 (72%), Gaps = 49/1363 (3%)
 Frame = +1

Query: 1    CLKFKSKRPQAKSIGVLERAFTA--CCEDAAQVTVNEAKTADGACYLELKVPSRSR-RDG 171
            CLKFK+++     +  L   F      ++ +Q+++NEAKT+DGA YLELKVPSRSR ++G
Sbjct: 101  CLKFKNRK-----VLYLMTYFVLGLLMQETSQISINEAKTSDGAYYLELKVPSRSRLQEG 155

Query: 172  IWDFLDRYGYHYGDGIARPLLPSEVLIILKKIPDATKKKLAGRGCFFQEGYIMQHLPVPP 351
             W FL++YG+ YGD  +RPLLPSEV+ IL+KIP  TK+KL+ +G F Q+GYI+QHLPVPP
Sbjct: 156  FWYFLEKYGFRYGDMYSRPLLPSEVMAILRKIPQETKRKLSAKGYFPQDGYILQHLPVPP 215

Query: 352  NCLSTPDVSDGISVMSSDISMTMLKKVLRQVEIIKSSRSGHPNFESLEVEVNDLQAAVAQ 531
            NCLS PD+SDGIS MS+D S+T+LKKVLRQVEIIK+SRSG PNFES E+E NDLQAAVAQ
Sbjct: 216  NCLSVPDISDGISTMSTDYSITLLKKVLRQVEIIKNSRSGKPNFESHEIEANDLQAAVAQ 275

Query: 532  YLQSRGA-KTSPDRNTRYGIAKEQTESSSTKAWLEKMKTLFISKGSGFSSRSVITGDPYK 708
            YLQ RG  K S D +TR+G+ KE   +SSTKAWLEKMKTLFI KGSGFSSRSVITGDP+K
Sbjct: 276  YLQFRGTGKASRDVDTRFGVNKE-INASSTKAWLEKMKTLFIRKGSGFSSRSVITGDPFK 334

Query: 709  GVGEIGIPFEIAQRITFEERVTEYNMKSLQKLVDDKLCLTYRDGQSTYSLREGSKGHTFL 888
            GV EIG+PFEIAQ+ITFEERV ++NM+ LQKLVD+KLCLTYRDG STYSLREGSKGHTFL
Sbjct: 335  GVSEIGLPFEIAQKITFEERVNQHNMQFLQKLVDEKLCLTYRDGLSTYSLREGSKGHTFL 394

Query: 889  KPGQVVHRKIMEGDVIFINRPPTTHKHSLQALSVYIHEDHTFKINPLICGPLSADFDGDC 1068
            +PGQVVHR+IM+GD++FINRPPTTHKHSLQALSVY+H+DHT KINPLICGPLSADFDGDC
Sbjct: 395  RPGQVVHRRIMDGDIVFINRPPTTHKHSLQALSVYVHDDHTVKINPLICGPLSADFDGDC 454

Query: 1069 IHIFYPQSPDAKAEVLELFAVEKQLLSSHSGHVNLQLGTDSVLSXXXXXXXXXXXXAEVQ 1248
            IH+FYPQS +AKAEV+ELF+VEKQLLSSH+G+ NLQL TDS+LS            A  Q
Sbjct: 455  IHLFYPQSLEAKAEVVELFSVEKQLLSSHTGNFNLQLATDSLLSLKILLRNYFLNRAAAQ 514

Query: 1249 QXXXXXXXXXXXXXXXXVRDSGPVWTVLELLETSLPRGFDCNGDKFVIRDSKILKLDYSR 1428
            Q                  DSGP+WT  ++L+T+LP  FDC+G++ +I  S+IL L+++R
Sbjct: 515  QLAMFVPSVLPKPAVVK-SDSGPLWTASQILQTTLPSSFDCSGERHIISKSEILSLEFNR 573

Query: 1429 DXXXXXXXXXXXXXFFTKGPNEVLKLFNSLQPLLMENLSKEGFNISLEDFIIPKPXXXXX 1608
            D             FF KGP EVL+ FNS+QPLLME+L  EGF++SL DF +P+      
Sbjct: 574  DVMASILNDIVTSLFFLKGPKEVLRFFNSIQPLLMESLYSEGFSVSLRDFFLPRDVLESI 633

Query: 1609 XXXXXXXXXXXRHLRKNYNEVIALQVDKRLRLVKNPISDFILRYSSMGNLIDVKSDSAVT 1788
                        HLR +Y+E I LQ+D  LR +K P+++F+L+ S++G+LID KS+SA++
Sbjct: 634  QENIQKISPLLYHLRASYSESIDLQLDTYLRSMKIPVTNFVLKSSAIGHLIDSKSESALS 693

Query: 1789 KIVQQIGFLGLQILEKGRLYSKTLAEDLSIHFLGNYPFPDDYPYEEFGLVRNGLFHGLDP 1968
            K+VQQIGFLG+QI +KG+ YS+ L +D+S  F   YP  DDYP EEFGLV   LF GLDP
Sbjct: 694  KVVQQIGFLGVQISDKGKFYSEMLVKDMSSLFQKKYPSCDDYPTEEFGLVGRPLFRGLDP 753

Query: 1969 YQEMVHSICNREQMVRSSRGLTEPGTLFKNSMAILRDVVICYDGTVRNVCSNSIIQFEYG 2148
            YQEMVHSI +RE +VRS+RGLTEPGTLFKN MAILRDVVICYDGTVRN+CSNSIIQFEYG
Sbjct: 754  YQEMVHSISSREVIVRSTRGLTEPGTLFKNLMAILRDVVICYDGTVRNMCSNSIIQFEYG 813

Query: 2149 GVTHNF---FAAGEPVGVLAATAMSNPAYKAVLDSSPNSNSSWDMMKEILFCGVNFKNVH 2319
              + N    F AG+PVGVLAATAMSNPAYKAVLDSSP+SNSSW+MMKEIL CGV+FKN  
Sbjct: 814  VSSANIASEFCAGDPVGVLAATAMSNPAYKAVLDSSPSSNSSWEMMKEILLCGVSFKNDI 873

Query: 2320 NDRRVVLYLNACDCGAKYCLENAAYLVKNHLRKVSLKDVALEFLIEYDRKQVAVDNA-ID 2496
            +DRRV+LYLN+CDCG K+C E AA +VKN L+KVSLKD A+EFLIEY R Q+A D+  ID
Sbjct: 874  SDRRVILYLNSCDCGRKHCQETAALIVKNQLKKVSLKDTAIEFLIEY-RSQMAHDSTEID 932

Query: 2497 AGLVGHVHLNKALLEESKISMEEILTKCEESLNSFRKKKKVGQLFKKIALDCSEC-SFNQ 2673
             GLVGH+HLNK  L +S ISM  IL +C+E+++  +KKKKVG LFKKI L  S+C SF Q
Sbjct: 933  PGLVGHIHLNKTQLIQSNISMHGILEQCQETISRHQKKKKVGNLFKKIDLSFSDCCSFCQ 992

Query: 2674 SSKSNWT--PCLKFFWQDTPDIHLEKTAHIFADAVCPVLLNAIIKGDPRVKEANITWISP 2847
            SSKS WT  PC++F WQ   D+ LE+ + I AD VCPVLL  IIKGDPRV  ANI WISP
Sbjct: 993  SSKSKWTDLPCIQFSWQARGDL-LERASDILADTVCPVLLQTIIKGDPRVSTANIIWISP 1051

Query: 2848 ETTGWIGNPSKEQKGELAINVVLEKEAVKKNGDAWRTVMDSCLPIIHLIDTTRSIPYAIK 3027
            +T  WI +P K  KGELA++++LEKEAV+K+GDAWR VMDSCLP+IHLIDT RSIPYAIK
Sbjct: 1052 DTATWIRSPCKSPKGELALDIILEKEAVRKSGDAWRVVMDSCLPVIHLIDTRRSIPYAIK 1111

Query: 3028 QVENLLGIACTFEQAIQRLSTSVSMVTKGMLKEHLLLLASSMTCAGILVGFNQAGIKALS 3207
            QV+ LLGI+C FEQA+QRLSTSV+MVTKG+LK+HLLLL +SMTCAG L+GFN  GIKALS
Sbjct: 1112 QVQELLGISCAFEQAVQRLSTSVTMVTKGVLKDHLLLLGNSMTCAGTLIGFNAGGIKALS 1171

Query: 3208 KALNFQAPFSEATVYTPKKCFEKAAEKCHADSLSSIVGACSWGKPVAVGTGSRFDILWDT 3387
            K+L+ Q PF  AT++TP+KCFE+AAEKCH D+LSSIVG+C+WGK V+VGTGS F+ILWDT
Sbjct: 1172 KSLSVQVPFMNATLFTPRKCFERAAEKCHVDNLSSIVGSCAWGKHVSVGTGSPFEILWDT 1231

Query: 3388 REVELNQKDGIDVYNFLNLVRGVSE-EEADNECLGGDLDYYELEDNYMEAG-SPELESGS 3561
            R+ EL+    IDVYNFL+LV   S+ E+    CLG +++  + ED++ME   SP  + G 
Sbjct: 1232 RKAELSPDKEIDVYNFLHLVNSSSKPEDMATSCLGAEIEDLDQEDDFMEYDPSPVRDPGL 1291

Query: 3562 AKPVFEDGLD-----------------------------LNIDEMDVDRTGGKSTWESGP 3654
             KP FEDG++                             ++ +E D  +  G+STWE   
Sbjct: 1292 DKPTFEDGIEYRLNGDDNDGLSKEDAKEPEGSWSSWTKKVDFEENDWTKKAGQSTWEKNV 1351

Query: 3655 APEDXXXXXXXXXXXXXXXXXXXXXXXSDKDLQETGSW------GGWGANKSQEDVVPSE 3816
              E+                       + K   E   W        WG   + E+     
Sbjct: 1352 NTEENDWTKKPEQSTWGKKVNSEENDWNKKVNSEENDWNKKPEQSTWGKKVNSEE----N 1407

Query: 3817 PWGKKNDDSAAGGGWGTKNSD-TNTEKGSSWGHKAAKADETGW 3942
             W +K + S  G    ++ +D TN  + S+WG + A ++E  W
Sbjct: 1408 DWTEKPEQSTWGKKVNSEENDWTNKPEESTWGKQVA-SEENDW 1449


>ref|XP_019066486.1| PREDICTED: DNA-directed RNA polymerase V subunit 1 [Solanum
            lycopersicum]
 ref|XP_019066488.1| PREDICTED: DNA-directed RNA polymerase V subunit 1 [Solanum
            lycopersicum]
          Length = 1984

 Score = 1533 bits (3968), Expect = 0.0
 Identities = 793/1332 (59%), Positives = 969/1332 (72%), Gaps = 17/1332 (1%)
 Frame = +1

Query: 1    CLKFKSKRPQAKSIGVLERAFTACCEDAAQVTVNEAKTADGACYLELKVPSRSRRDGIWD 180
            CLK K+++ Q K+ GVLER  ++CCED +QV+V E KT+DGA YLELKVP  + +   W+
Sbjct: 102  CLKMKNRKFQVKNAGVLERMLSSCCEDVSQVSVYEGKTSDGASYLELKVPKNAAKLQEWN 161

Query: 181  FLDRYGYHYGDGIARPLLPSEVLIILKKIPDATKKKLAGRGCFFQEGYIMQHLPVPPNCL 360
            FL++YGY YGDG +RPLLPSEVL IL++I + T+KKL+ +G F QEGYI+Q+LPVPPNCL
Sbjct: 162  FLEKYGYRYGDGYSRPLLPSEVLAILRRIREDTRKKLSAKGYFPQEGYILQYLPVPPNCL 221

Query: 361  STPDVSDGISVMSSDISMTMLKKVLRQVEIIKSSRSGHPNFESLEVEVNDLQAAVAQYLQ 540
            S PD+SDG ++MSSD S+TML+KVLRQ++IIKSSRSG PNFE+ EVE NDLQAAV QYLQ
Sbjct: 222  SVPDISDGNNIMSSDHSITMLRKVLRQIDIIKSSRSGTPNFEAHEVEANDLQAAVVQYLQ 281

Query: 541  SRGA-KTSPDRNTRYGIAKEQTESSSTKAWLEKMKTLFISKGSGFSSRSVITGDPYKGVG 717
             RG  K S D + R+GI KE  +++ TKAWLEKMKTLFI KGSGFSSRSVITGDPYKGVG
Sbjct: 282  FRGTGKASRDVDKRFGIHKEAADTT-TKAWLEKMKTLFIRKGSGFSSRSVITGDPYKGVG 340

Query: 718  EIGIPFEIAQRITFEERVTEYNMKSLQKLVDDKLCLTYRDGQSTYSLREGSKGHTFLKPG 897
            EIG+P EIAQ+ITFEERV+++NM  LQKLVD+KLCLTY+DG STYSLREGSKGHTFL+PG
Sbjct: 341  EIGLPCEIAQKITFEERVSQHNMAYLQKLVDEKLCLTYKDGSSTYSLREGSKGHTFLRPG 400

Query: 898  QVVHRKIMEGDVIFINRPPTTHKHSLQALSVYIHEDHTFKINPLICGPLSADFDGDCIHI 1077
            Q+VHR+IM+GD +FINRPPTTHKHSLQALSVY+H+DHT KINPL+CGPLSADFDGDCIH+
Sbjct: 401  QIVHRRIMDGDTVFINRPPTTHKHSLQALSVYVHDDHTVKINPLMCGPLSADFDGDCIHL 460

Query: 1078 FYPQSPDAKAEVLELFAVEKQLLSSHSGHVNLQLGTDSVLSXXXXXXXXXXXXAEVQQXX 1257
            FYPQS  AKAEVLELFAV KQLLSSH+G+ NLQL TDS+LS            A  QQ  
Sbjct: 461  FYPQSLSAKAEVLELFAVGKQLLSSHTGNFNLQLATDSLLSLKLMFSHYFFDKAAAQQLA 520

Query: 1258 XXXXXXXXXXXXXXVRDSGPVWTVLELLETSLPRGFDCNGDKFVIRDSKILKLDYSRDXX 1437
                          VR SG +WT L++L  +LP GFD  G+   I  S+ L +DY RD  
Sbjct: 521  MFLPMALPDSAVVDVRKSGAMWTTLQILGAALPDGFDSCGETHTIGKSQFLGIDYHRDLI 580

Query: 1438 XXXXXXXXXXXFFTKGPNEVLKLFNSLQPLLMENLSKEGFNISLEDFIIPKPXXXXXXXX 1617
                       +F KGPN+VLK FNSLQPLLMENL  EGF+ISL DF + K         
Sbjct: 581  SSILNDVITSIYFMKGPNDVLKFFNSLQPLLMENLCTEGFSISLRDFYMTKAVRDGIQER 640

Query: 1618 XXXXXXXXRHLRKNYNEVIALQVDKRLRLVKNPISDFILRYSSMGNLIDVKSDSAVTKIV 1797
                     HLR +YNE + +Q++  LR  K P+ DF+L+ S MG LID KS+SA  K+V
Sbjct: 641  IQCMSKLLHHLRSSYNESVEVQLEHHLRNEKLPVIDFVLKSSGMGVLIDSKSESAFNKVV 700

Query: 1798 QQIGFLGLQILEKGRLYSKTLAEDLSIHFLGNYPFPDDYPYEEFGLVRNGLFHGLDPYQE 1977
            QQIGFLGLQI ++G+ Y+KTL  D++  F   YP     P EEFGLVR+ LF+GLDPYQ 
Sbjct: 701  QQIGFLGLQISDRGKFYTKTLVHDMAQLFQKKYPSVGTNPSEEFGLVRSCLFYGLDPYQG 760

Query: 1978 MVHSICNREQMVRSSRGLTEPGTLFKNSMAILRDVVICYDGTVRNVCSNSIIQFEYGGV- 2154
            M+HSI +RE +VRS+RGLTEPGTLFKN MAILRDVVICYDGTVRNV SNSIIQFEYG   
Sbjct: 761  MIHSISSREVIVRSTRGLTEPGTLFKNLMAILRDVVICYDGTVRNVSSNSIIQFEYGSSG 820

Query: 2155 ---THNFFAAGEPVGVLAATAMSNPAYKAVLDSSPNSNSSWDMMKEILFCGVNFKNVHND 2325
                 + F AG+PVGVLAATAMSNPAYKAVLDSSP+SNSSW+MMKEIL CGV+FKN  +D
Sbjct: 821  GSNLPSEFCAGDPVGVLAATAMSNPAYKAVLDSSPSSNSSWEMMKEILLCGVSFKNDVSD 880

Query: 2326 RRVVLYLNACDCGAKYCLENAAYLVKNHLRKVSLKDVALEFLIEYDRKQVAVDNA-IDAG 2502
            RRV+LYLN C C   YC E AAY+VKNHL KV LKD A EFLIEY  +Q   +N+    G
Sbjct: 881  RRVILYLNDCGCRRGYCREKAAYVVKNHLSKVCLKDAADEFLIEYAGRQAGYENSETGTG 940

Query: 2503 LVGHVHLNKALLEESKISMEEILTKCEESLNSFRKKKKVGQLFKKIALDCSE-CSF--NQ 2673
            L+GH+ LN+  LE   IS+ E+  +C+E+++SF+KKKK+G LFK+I L  SE CSF  N 
Sbjct: 941  LIGHIRLNQGQLENLGISVLEVHERCQENISSFQKKKKIGNLFKRIVLSVSEFCSFCHNS 1000

Query: 2674 SSKSNWTPCLKFFWQDTPDIHLEKTAHIFADAVCPVLLNAIIKGDPRVKEANITWISPET 2853
             SK    PCL+F W D  D HLE+ +HI AD +CP+LL+ +IKGDPRV  ANI WISP+T
Sbjct: 1001 GSKCLNAPCLRFSWPDASDDHLERVSHILADMICPILLDTVIKGDPRVSSANIAWISPDT 1060

Query: 2854 TGWIGNPSKEQKGELAINVVLEKEAVKKNGDAWRTVMDSCLPIIHLIDTTRSIPYAIKQV 3033
              WI +PSK Q+GELA+++VLEKEAVK+ GDAWR +MDSCLP+IHLIDTTRSIPYAIKQV
Sbjct: 1061 MSWIRSPSKSQRGELALDIVLEKEAVKQRGDAWRILMDSCLPVIHLIDTTRSIPYAIKQV 1120

Query: 3034 ENLLGIACTFEQAIQRLSTSVSMVTKGMLKEHLLLLASSMTCAGILVGFNQAGIKALSKA 3213
            + L+GI+C FEQA++RLSTSV+MVTKG+LK+HL+LLA+SMTCAG LVGFN  GIKALS++
Sbjct: 1121 QELIGISCAFEQAVKRLSTSVTMVTKGVLKDHLVLLANSMTCAGNLVGFNAGGIKALSRS 1180

Query: 3214 LNFQAPFSEATVYTPKKCFEKAAEKCHADSLSSIVGACSWGKPVAVGTGSRFDILWDTRE 3393
            LN Q PF+EAT++TP+KCFE+AAEKCH DSLSSIV +CSWGK VAVGTGSRF++L +TR 
Sbjct: 1181 LNVQIPFTEATLFTPRKCFERAAEKCHVDSLSSIVASCSWGKHVAVGTGSRFEVLLNTRN 1240

Query: 3394 VELNQKDGIDVYNFLNLVRGVSEEEAD-NECLGGDLDYYELEDNYMEAGSPELESGSAKP 3570
            VE N  D  DVY+FL+LVR  S +E +   CLG ++D  E +++     SP  +SGS  P
Sbjct: 1241 VEWNIPDTRDVYSFLHLVRNTSAQEVEGTSCLGAEIDELEEDEDMGLYLSPNRDSGSEMP 1300

Query: 3571 VFEDGLDLNIDE-MDVDRTGGKSTWESGPAPEDXXXXXXXXXXXXXXXXXXXXXXXSDKD 3747
             FED  + + +E +D  +  G S WE   +                          +++ 
Sbjct: 1301 TFEDRAEFDYNENLDEGKPSG-SAWEKASS--------GSVKSGGSWDMAGKTQNGAEEG 1351

Query: 3748 LQETGSWGGW-----GANKSQEDVV-PSEPWGKKNDDSAAGGGWGTKNSDTNTEKGSSWG 3909
            + ++ SW  W     G+N  Q  V   SE WGKK  ++  G  WG K     T+ GSSWG
Sbjct: 1352 VNQSDSWSAWGKKVDGSNTQQSGVTEQSESWGKKG-ETDGGSSWGKKG---ETDGGSSWG 1407

Query: 3910 HKAAKADETGWG 3945
             KA     + WG
Sbjct: 1408 KKAETDGGSSWG 1419


>ref|XP_015056787.1| PREDICTED: DNA-directed RNA polymerase V subunit 1-like [Solanum
            pennellii]
 ref|XP_015056795.1| PREDICTED: DNA-directed RNA polymerase V subunit 1-like [Solanum
            pennellii]
          Length = 2044

 Score = 1532 bits (3967), Expect = 0.0
 Identities = 793/1332 (59%), Positives = 969/1332 (72%), Gaps = 17/1332 (1%)
 Frame = +1

Query: 1    CLKFKSKRPQAKSIGVLERAFTACCEDAAQVTVNEAKTADGACYLELKVPSRSRRDGIWD 180
            CLK K+++ Q K+ GVLER  ++CCED +QV+V E KT+DGA YLELKVP  + +   W+
Sbjct: 102  CLKMKNRKFQVKNAGVLERMLSSCCEDVSQVSVYEGKTSDGASYLELKVPKNAAKLQEWN 161

Query: 181  FLDRYGYHYGDGIARPLLPSEVLIILKKIPDATKKKLAGRGCFFQEGYIMQHLPVPPNCL 360
            FL++YGY YGDG +RPLLPSEVL IL++I + T+KKL+ +G F QEGYI+Q+LPVPPNCL
Sbjct: 162  FLEKYGYRYGDGYSRPLLPSEVLAILRRIREDTRKKLSAKGYFPQEGYILQYLPVPPNCL 221

Query: 361  STPDVSDGISVMSSDISMTMLKKVLRQVEIIKSSRSGHPNFESLEVEVNDLQAAVAQYLQ 540
            S PD+SDG ++MSSD S+TML+KVLRQ++IIKSSRSG PNFE+ EVE NDLQAAV QYLQ
Sbjct: 222  SVPDISDGNNIMSSDHSITMLRKVLRQIDIIKSSRSGTPNFEAHEVEANDLQAAVVQYLQ 281

Query: 541  SRGA-KTSPDRNTRYGIAKEQTESSSTKAWLEKMKTLFISKGSGFSSRSVITGDPYKGVG 717
             RG  K S D + R+GI KE  +++ TKAWLEKMKTLFI KGSGFSSRSVITGDPYKGVG
Sbjct: 282  FRGTGKASRDVDKRFGIHKEAADTT-TKAWLEKMKTLFIRKGSGFSSRSVITGDPYKGVG 340

Query: 718  EIGIPFEIAQRITFEERVTEYNMKSLQKLVDDKLCLTYRDGQSTYSLREGSKGHTFLKPG 897
            EIG+P EIAQ+ITFEERV+++NM  LQKLVD+KLCLTY+DG STYSLREGSKGHTFL+PG
Sbjct: 341  EIGLPCEIAQKITFEERVSQHNMAYLQKLVDEKLCLTYKDGSSTYSLREGSKGHTFLRPG 400

Query: 898  QVVHRKIMEGDVIFINRPPTTHKHSLQALSVYIHEDHTFKINPLICGPLSADFDGDCIHI 1077
            Q+VHR+IM+GD +FINRPPTTHKHSLQALSVY+H+DHT KINPL+CGPLSADFDGDCIH+
Sbjct: 401  QIVHRRIMDGDTVFINRPPTTHKHSLQALSVYVHDDHTVKINPLMCGPLSADFDGDCIHL 460

Query: 1078 FYPQSPDAKAEVLELFAVEKQLLSSHSGHVNLQLGTDSVLSXXXXXXXXXXXXAEVQQXX 1257
            FYPQS  AKAEVLELFAV KQLLSSH+G+ NLQL TDS+LS            A  QQ  
Sbjct: 461  FYPQSLSAKAEVLELFAVGKQLLSSHTGNFNLQLATDSLLSLKLMFSHYFFDKAAAQQLA 520

Query: 1258 XXXXXXXXXXXXXXVRDSGPVWTVLELLETSLPRGFDCNGDKFVIRDSKILKLDYSRDXX 1437
                          VR SG +WT L++L  +LP GFD  G+   I  S+ L +DY RD  
Sbjct: 521  MFLPMALPDSAVVDVRKSGAMWTTLQILGAALPDGFDSCGETHTIGKSQFLGIDYHRDLI 580

Query: 1438 XXXXXXXXXXXFFTKGPNEVLKLFNSLQPLLMENLSKEGFNISLEDFIIPKPXXXXXXXX 1617
                       +F KGPN+VLK FNSLQPLLMENL  EGF+ISL DF + K         
Sbjct: 581  SSILNDVITSIYFMKGPNDVLKFFNSLQPLLMENLCTEGFSISLRDFYMTKAVRDGIQER 640

Query: 1618 XXXXXXXXRHLRKNYNEVIALQVDKRLRLVKNPISDFILRYSSMGNLIDVKSDSAVTKIV 1797
                     HLR +YNE + +Q++  LR  K P+ DF+L+ S MG LID KS+SA  K+V
Sbjct: 641  IQCMSKLLHHLRSSYNESVEVQLEHHLRNEKLPVIDFVLKSSGMGVLIDSKSESAFNKVV 700

Query: 1798 QQIGFLGLQILEKGRLYSKTLAEDLSIHFLGNYPFPDDYPYEEFGLVRNGLFHGLDPYQE 1977
            QQIGFLGLQI ++G+ Y+KTL  D++  F   YP     P EEFGLVR+ LF+GLDPYQ 
Sbjct: 701  QQIGFLGLQISDRGKFYTKTLVHDMAQLFQKKYPSVGTNPSEEFGLVRSCLFYGLDPYQG 760

Query: 1978 MVHSICNREQMVRSSRGLTEPGTLFKNSMAILRDVVICYDGTVRNVCSNSIIQFEYGGV- 2154
            M+HSI +RE +VRS+RGLTEPGTLFKN MAILRDVVICYDGTVRNV SNSIIQFEYG   
Sbjct: 761  MIHSISSREVIVRSTRGLTEPGTLFKNLMAILRDVVICYDGTVRNVSSNSIIQFEYGSSG 820

Query: 2155 ---THNFFAAGEPVGVLAATAMSNPAYKAVLDSSPNSNSSWDMMKEILFCGVNFKNVHND 2325
                 + F AG+PVGVLAATAMSNPAYKAVLDSSP+SNSSW+MMKEIL CGV+FKN  +D
Sbjct: 821  GSNLPSEFCAGDPVGVLAATAMSNPAYKAVLDSSPSSNSSWEMMKEILLCGVSFKNDVSD 880

Query: 2326 RRVVLYLNACDCGAKYCLENAAYLVKNHLRKVSLKDVALEFLIEYDRKQVAVDNA-IDAG 2502
            RRV+LYLN C C   YC E AAY+VKNHL KV LKD A EFLIEY  +Q   +N+    G
Sbjct: 881  RRVILYLNDCGCRRGYCREKAAYVVKNHLSKVCLKDAADEFLIEYAGRQAGYENSETGTG 940

Query: 2503 LVGHVHLNKALLEESKISMEEILTKCEESLNSFRKKKKVGQLFKKIALDCSE-CSF--NQ 2673
            L+GH+ LN+  LE   IS+ E+  +C+E+++SF+KKKK+G LFK+I L  SE CSF  N 
Sbjct: 941  LIGHIRLNQGQLENLGISVLEVHERCQENISSFQKKKKIGNLFKRIVLSVSEFCSFCHNS 1000

Query: 2674 SSKSNWTPCLKFFWQDTPDIHLEKTAHIFADAVCPVLLNAIIKGDPRVKEANITWISPET 2853
             SK    PCL+F W D  D HLE+ +HI AD +CP+LL+ +IKGDPRV  ANI WISP+T
Sbjct: 1001 GSKCLNAPCLRFSWPDASDDHLERVSHILADMICPILLDTVIKGDPRVSSANIAWISPDT 1060

Query: 2854 TGWIGNPSKEQKGELAINVVLEKEAVKKNGDAWRTVMDSCLPIIHLIDTTRSIPYAIKQV 3033
              WI +PSK Q+GELA+++VLEKEAVK+ GDAWR +MDSCLP+IHLIDTTRSIPYAIKQV
Sbjct: 1061 MSWIRSPSKSQRGELALDIVLEKEAVKQRGDAWRILMDSCLPVIHLIDTTRSIPYAIKQV 1120

Query: 3034 ENLLGIACTFEQAIQRLSTSVSMVTKGMLKEHLLLLASSMTCAGILVGFNQAGIKALSKA 3213
            + L+GI+C FEQA++RLSTSV+MVTKG+LK+HL+LLA+SMTCAG LVGFN  GIKALS++
Sbjct: 1121 QELIGISCAFEQAVKRLSTSVTMVTKGVLKDHLVLLANSMTCAGNLVGFNAGGIKALSRS 1180

Query: 3214 LNFQAPFSEATVYTPKKCFEKAAEKCHADSLSSIVGACSWGKPVAVGTGSRFDILWDTRE 3393
            LN Q PF+EAT++TP+KCFE+AAEKCH DSLSSIV +CSWGK VAVGTGSRF++L +TR 
Sbjct: 1181 LNVQIPFTEATLFTPRKCFERAAEKCHVDSLSSIVASCSWGKHVAVGTGSRFEVLLNTRN 1240

Query: 3394 VELNQKDGIDVYNFLNLVRGVSEEEAD-NECLGGDLDYYELEDNYMEAGSPELESGSAKP 3570
            VE N  D  DVY+FL+LVR  S +E +   CLG ++D  E +++     SP  +SGS  P
Sbjct: 1241 VEWNIPDTRDVYSFLHLVRSTSAQEVEGTSCLGAEIDELEDDEDMGLYLSPNRDSGSEMP 1300

Query: 3571 VFEDGLDLNIDE-MDVDRTGGKSTWESGPAPEDXXXXXXXXXXXXXXXXXXXXXXXSDKD 3747
             FED  + + +E +D  +  G S WE   +                          +++ 
Sbjct: 1301 TFEDRAEFDYNENLDEGKPSG-SAWEKASS--------GSVKSGGSWDMAGKTQNGAEEG 1351

Query: 3748 LQETGSWGGW-----GANKSQEDVV-PSEPWGKKNDDSAAGGGWGTKNSDTNTEKGSSWG 3909
            + ++ SW  W     G+N  Q  V   SE WGKK  ++  G  WG K     T+ GSSWG
Sbjct: 1352 VNQSDSWSAWGKKVDGSNPQQSGVTEQSESWGKKG-ETDGGSSWGKKG---ETDVGSSWG 1407

Query: 3910 HKAAKADETGWG 3945
             KA     + WG
Sbjct: 1408 KKAEMDGGSSWG 1419


>ref|XP_002265533.1| PREDICTED: DNA-directed RNA polymerase V subunit 1 [Vitis vinifera]
          Length = 1830

 Score = 1529 bits (3959), Expect = 0.0
 Identities = 801/1345 (59%), Positives = 969/1345 (72%), Gaps = 27/1345 (2%)
 Frame = +1

Query: 1    CLK-FKSKRPQAKSIGVLERAFTACCEDAAQVTVNEAKTADGACYLELKVPSRSR-RDGI 174
            CLK  K ++ +  + G+ E+    CC+D+ QV+V E +  +GAC+LELK+PSRSR +DG 
Sbjct: 97   CLKCLKIRKSKVTNNGITEQLLAPCCQDSPQVSVREFRPTEGACFLELKIPSRSRPKDGF 156

Query: 175  WDFLDRYGYHYGDGIARPLLPSEVLIILKKIPDATKKKLAGRGCFFQEGYIMQHLPVPPN 354
            WDFL RYGY YG  ++R LLPSEV+ IL++IP+ T+KKL  +G F Q+GYI+Q+LPVPPN
Sbjct: 157  WDFLARYGYRYGHNLSRILLPSEVMEILRRIPEDTRKKLVRKGYFPQDGYILQYLPVPPN 216

Query: 355  CLSTPDVSDGISVMSSDISMTMLKKVLRQVEIIKSSRSGHPNFESLEVEVNDLQAAVAQY 534
            CLS PD+SDG+S+MSSD+S++MLKKVL+Q+E+IK SRSG PNFES ++E N+LQ+++ QY
Sbjct: 217  CLSVPDISDGVSIMSSDLSVSMLKKVLKQIEVIKGSRSGEPNFESHKIEANNLQSSIEQY 276

Query: 535  LQSRG-AKTSPDRNTRYGIAKEQTESSSTKAWLEKMKTLFISKGSGFSSRSVITGDPYKG 711
            L+ RG AKTS   +TR+G +KE  ESS TKAWLEKM+TLFI KGSGFSSRSVITGD YK 
Sbjct: 277  LEVRGTAKTSRSLDTRFGSSKEPNESS-TKAWLEKMRTLFIRKGSGFSSRSVITGDAYKR 335

Query: 712  VGEIGIPFEIAQRITFEERVTEYNMKSLQKLVDDKLCLTYRDGQSTYSLREGSKGHTFLK 891
            V EIG+PFEIAQRITFEERV  +NMK LQ LVD+KLCLTYRDG STYSLREGSKGHTFL+
Sbjct: 336  VNEIGLPFEIAQRITFEERVNVHNMKHLQNLVDEKLCLTYRDGLSTYSLREGSKGHTFLR 395

Query: 892  PGQVVHRKIMEGDVIFINRPPTTHKHSLQALSVYIHEDHTFKINPLICGPLSADFDGDCI 1071
            PGQVVHR+IM+GD++FINRPPTTHKHSLQALSVY+H+DHT KINPLICGPLSADFDGDC+
Sbjct: 396  PGQVVHRRIMDGDIVFINRPPTTHKHSLQALSVYVHDDHTVKINPLICGPLSADFDGDCV 455

Query: 1072 HIFYPQSPDAKAEVLELFAVEKQLLSSHSGHVNLQLGTDSVLSXXXXXXXXXXXXAEVQQ 1251
            H+FYPQS  AKAEVLELF+VEKQLLSSHSG++NLQL TDS+LS            A  QQ
Sbjct: 456  HLFYPQSLGAKAEVLELFSVEKQLLSSHSGNLNLQLATDSLLSLKVLFERYFLNKAAAQQ 515

Query: 1252 XXXXXXXXXXXXXXXXVRDSGPVWTVLELLETSLPRGFDCNGDKFVIRDSKILKLDYSRD 1431
                               SGP WT L++L+T+LP  FDC G++  I  S ILK+DY+RD
Sbjct: 516  LVMFVSMSLPRPALLKSPCSGPCWTALQILQTALPSYFDCIGERHWISKSAILKVDYNRD 575

Query: 1432 XXXXXXXXXXXXXFFTKGPNEVLKLFNSLQPLLMENLSKEGFNISLEDFIIPKPXXXXXX 1611
                         F  KGPNEVLK F+SLQPLLMENL  EGF++SLEDF IP        
Sbjct: 576  VLQSLVNEIVTSIFSEKGPNEVLKFFDSLQPLLMENLFSEGFSVSLEDFSIPSEVTQNIQ 635

Query: 1612 XXXXXXXXXXRHLRKNYNEVIALQVDKRLRLVKNPISDFILRYSSMGNLIDVKSDSAVTK 1791
                       +LR  YNE++ LQ +  LRL K P+++FIL  S++GNLID KSDSA+ K
Sbjct: 636  KNVEDISSLLYNLRSMYNELLQLQAENHLRLTKVPVANFILNSSALGNLIDSKSDSAINK 695

Query: 1792 IVQQIGFLGLQILEKGRLYSKTLAEDLSIHFLGNYPFPD-DYPYEEFGLVRNGLFHGLDP 1968
            +VQQIGFLG Q+ EKG+ YS+TL E ++  F   YPF   DYP  EFGL+R+  FHGLDP
Sbjct: 696  VVQQIGFLGQQLSEKGKFYSRTLVEGMAYLFKSKYPFHGADYPSGEFGLIRSCFFHGLDP 755

Query: 1969 YQEMVHSICNREQMVRSSRGLTEPGTLFKNSMAILRDVVICYDGTVRNVCSNSIIQFEYG 2148
            Y+EMVHSI  RE +VRSSRGL+EPGTLFKN MAILRDVVICYDGTVRNVCSNSIIQFEYG
Sbjct: 756  YEEMVHSISTREIIVRSSRGLSEPGTLFKNLMAILRDVVICYDGTVRNVCSNSIIQFEYG 815

Query: 2149 GVTH----NFFAAGEPVGVLAATAMSNPAYKAVLDSSPNSNSSWDMMKEILFCGVNFKNV 2316
                    +FF AGEPVGVLAATAMSNPAYKAVLDSSP+SNSSW++MKEIL C VNFKN 
Sbjct: 816  VKARTKPQHFFPAGEPVGVLAATAMSNPAYKAVLDSSPSSNSSWELMKEILLCQVNFKND 875

Query: 2317 HNDRRVVLYLNACDCGAKYCLENAAYLVKNHLRKVSLKDVALEFLIEYDRKQVAVDNAID 2496
              DRRV+LYLN CDCG KYC ENAAYLVKN L+K SLKD A+EF+IEY  KQ AV  + +
Sbjct: 876  LIDRRVILYLNDCDCGRKYCRENAAYLVKNQLKKASLKDTAVEFMIEYV-KQHAVSGSSE 934

Query: 2497 --AGLVGHVHLNKALLEESKISMEEILTKCEESLNSFRKKKKVGQLFKKIALDCSEC-SF 2667
               GLVGH+HLNK LL++  +SM+E+  KCEE++NSFRKKK VG  FKKI L   EC +F
Sbjct: 935  PGTGLVGHIHLNKLLLQDLNVSMQEVCQKCEETINSFRKKKNVGPFFKKIILSFRECCTF 994

Query: 2668 NQS--SKSNWTPCLKFFWQDTPDIHLEKTAHIFADAVCPVLLNAIIKGDPRVKEANITWI 2841
              S  SK +  PCL FFWQ   D +LE+  HI A  +CPVLL  IIKGD RV   NI WI
Sbjct: 995  QHSCQSKGSDMPCLLFFWQGNRDDNLEQILHILAHKICPVLLQTIIKGDSRVCTVNIIWI 1054

Query: 2842 SPETTGWIGNPSKEQKGELAINVVLEKEAVKKNGDAWRTVMDSCLPIIHLIDTTRSIPYA 3021
            SP+TT WI NP K +KGELA+++VLEK AVK+ GDAWR V+D+CLP++HLIDT RSIPYA
Sbjct: 1055 SPDTTTWIRNPCKSRKGELALDIVLEKAAVKQRGDAWRIVLDACLPVLHLIDTRRSIPYA 1114

Query: 3022 IKQVENLLGIACTFEQAIQRLSTSVSMVTKGMLKEHLLLLASSMTCAGILVGFNQAGIKA 3201
            IKQV+ LLGI+C F+QA+QRLS SV+MV KG+LKEHL+LLA+SMTCAG L+GFN  G KA
Sbjct: 1115 IKQVQELLGISCAFDQAVQRLSKSVTMVAKGVLKEHLILLANSMTCAGNLIGFNSGGYKA 1174

Query: 3202 LSKALNFQAPFSEATVYTPKKCFEKAAEKCHADSLSSIVGACSWGKPVAVGTGSRFDILW 3381
            LS+ALN Q PF+EAT++TP+KCFEKA+EKCH DSLSSIV +CSWGK V VGTGSRFD+LW
Sbjct: 1175 LSRALNLQVPFTEATLFTPRKCFEKASEKCHTDSLSSIVASCSWGKHVTVGTGSRFDVLW 1234

Query: 3382 DTREVELNQKDGIDVYNFLNLVR-GVSEEEADNECLGGDLDYYELEDNYMEAG-SPELES 3555
            DT+E+   Q  GID+Y+FL+LVR G   +E D  CLG +++   LED  +E G SPE  S
Sbjct: 1235 DTKEIGPAQDGGIDIYSFLHLVRSGSYGKEPDTACLGAEVEDLILEDENLELGMSPEHSS 1294

Query: 3556 GSAKPVFEDGLDL-NIDEMDVDRTGG-------KSTWESGPAPEDXXXXXXXXXXXXXXX 3711
               KPVFED  +  N  E  V  +GG       K T  S   P                 
Sbjct: 1295 NFEKPVFEDSAEFQNTWENHVPGSGGDWAVNQNKETTASTLKPS-----AWSSWGTDKVT 1349

Query: 3712 XXXXXXXXSDKDLQETGSW---GGWGANKSQEDVVPSEPWGKKNDDSAAGGGWGTKNSDT 3882
                       +   +  W   G WG +K+Q     +  + + ++DS    G      D 
Sbjct: 1350 MKDTFSTREPDESSRSAGWDDKGTWGTDKAQ-----NTAFRRTHEDSPRSSGRDETFRDG 1404

Query: 3883 NTEKGSS-WGHKAAKADETGWGSNN 3954
              +  SS WG K  +AD+TGW  N+
Sbjct: 1405 RPQFASSAWGKKIDEADKTGWNKND 1429


>emb|CBI40152.3| unnamed protein product, partial [Vitis vinifera]
          Length = 1890

 Score = 1525 bits (3949), Expect = 0.0
 Identities = 797/1330 (59%), Positives = 961/1330 (72%), Gaps = 26/1330 (1%)
 Frame = +1

Query: 43   GVLERAFTACCEDAAQVTVNEAKTADGACYLELKVPSRSR-RDGIWDFLDRYGYHYGDGI 219
            G+ E+    CC+D+ QV+V E +  +GAC+LELK+PSRSR +DG WDFL RYGY YG  +
Sbjct: 172  GITEQLLAPCCQDSPQVSVREFRPTEGACFLELKIPSRSRPKDGFWDFLARYGYRYGHNL 231

Query: 220  ARPLLPSEVLIILKKIPDATKKKLAGRGCFFQEGYIMQHLPVPPNCLSTPDVSDGISVMS 399
            +R LLPSEV+ IL++IP+ T+KKL  +G F Q+GYI+Q+LPVPPNCLS PD+SDG+S+MS
Sbjct: 232  SRILLPSEVMEILRRIPEDTRKKLVRKGYFPQDGYILQYLPVPPNCLSVPDISDGVSIMS 291

Query: 400  SDISMTMLKKVLRQVEIIKSSRSGHPNFESLEVEVNDLQAAVAQYLQSRG-AKTSPDRNT 576
            SD+S++MLKKVL+Q+E+IK SRSG PNFES ++E N+LQ+++ QYL+ RG AKTS   +T
Sbjct: 292  SDLSVSMLKKVLKQIEVIKGSRSGEPNFESHKIEANNLQSSIEQYLEVRGTAKTSRSLDT 351

Query: 577  RYGIAKEQTESSSTKAWLEKMKTLFISKGSGFSSRSVITGDPYKGVGEIGIPFEIAQRIT 756
            R+G +KE  ESS TKAWLEKM+TLFI KGSGFSSRSVITGD YK V EIG+PFEIAQRIT
Sbjct: 352  RFGSSKEPNESS-TKAWLEKMRTLFIRKGSGFSSRSVITGDAYKRVNEIGLPFEIAQRIT 410

Query: 757  FEERVTEYNMKSLQKLVDDKLCLTYRDGQSTYSLREGSKGHTFLKPGQVVHRKIMEGDVI 936
            FEERV  +NMK LQ LVD+KLCLTYRDG STYSLREGSKGHTFL+PGQVVHR+IM+GD++
Sbjct: 411  FEERVNVHNMKHLQNLVDEKLCLTYRDGLSTYSLREGSKGHTFLRPGQVVHRRIMDGDIV 470

Query: 937  FINRPPTTHKHSLQALSVYIHEDHTFKINPLICGPLSADFDGDCIHIFYPQSPDAKAEVL 1116
            FINRPPTTHKHSLQALSVY+H+DHT KINPLICGPLSADFDGDC+H+FYPQS  AKAEVL
Sbjct: 471  FINRPPTTHKHSLQALSVYVHDDHTVKINPLICGPLSADFDGDCVHLFYPQSLGAKAEVL 530

Query: 1117 ELFAVEKQLLSSHSGHVNLQLGTDSVLSXXXXXXXXXXXXAEVQQXXXXXXXXXXXXXXX 1296
            ELF+VEKQLLSSHSG++NLQL TDS+LS            A  QQ               
Sbjct: 531  ELFSVEKQLLSSHSGNLNLQLATDSLLSLKVLFERYFLNKAAAQQLVMFVSMSLPRPALL 590

Query: 1297 XVRDSGPVWTVLELLETSLPRGFDCNGDKFVIRDSKILKLDYSRDXXXXXXXXXXXXXFF 1476
                SGP WT L++L+T+LP  FDC G++  I  S ILK+DY+RD             F 
Sbjct: 591  KSPCSGPCWTALQILQTALPSYFDCIGERHWISKSAILKVDYNRDVLQSLVNEIVTSIFS 650

Query: 1477 TKGPNEVLKLFNSLQPLLMENLSKEGFNISLEDFIIPKPXXXXXXXXXXXXXXXXRHLRK 1656
             KGPNEVLK F+SLQPLLMENL  EGF++SLEDF IP                   +LR 
Sbjct: 651  EKGPNEVLKFFDSLQPLLMENLFSEGFSVSLEDFSIPSEVTQNIQKNVEDISSLLYNLRS 710

Query: 1657 NYNEVIALQVDKRLRLVKNPISDFILRYSSMGNLIDVKSDSAVTKIVQQIGFLGLQILEK 1836
             YNE++ LQ +  LRL K P+++FIL  S++GNLID KSDSA+ K+VQQIGFLG Q+ EK
Sbjct: 711  MYNELLQLQAENHLRLTKVPVANFILNSSALGNLIDSKSDSAINKVVQQIGFLGQQLSEK 770

Query: 1837 GRLYSKTLAEDLSIHFLGNYPFPD-DYPYEEFGLVRNGLFHGLDPYQEMVHSICNREQMV 2013
            G+ YS+TL E ++  F   YPF   DYP  EFGL+R+  FHGLDPY+EMVHSI  RE +V
Sbjct: 771  GKFYSRTLVEGMAYLFKSKYPFHGADYPSGEFGLIRSCFFHGLDPYEEMVHSISTREIIV 830

Query: 2014 RSSRGLTEPGTLFKNSMAILRDVVICYDGTVRNVCSNSIIQFEYGGVTH----NFFAAGE 2181
            RSSRGL+EPGTLFKN MAILRDVVICYDGTVRNVCSNSIIQFEYG        +FF AGE
Sbjct: 831  RSSRGLSEPGTLFKNLMAILRDVVICYDGTVRNVCSNSIIQFEYGVKARTKPQHFFPAGE 890

Query: 2182 PVGVLAATAMSNPAYKAVLDSSPNSNSSWDMMKEILFCGVNFKNVHNDRRVVLYLNACDC 2361
            PVGVLAATAMSNPAYKAVLDSSP+SNSSW++MKEIL C VNFKN   DRRV+LYLN CDC
Sbjct: 891  PVGVLAATAMSNPAYKAVLDSSPSSNSSWELMKEILLCQVNFKNDLIDRRVILYLNDCDC 950

Query: 2362 GAKYCLENAAYLVKNHLRKVSLKDVALEFLIEYDRKQVAVDNAID--AGLVGHVHLNKAL 2535
            G KYC ENAAYLVKN L+K SLKD A+EF+IEY  KQ AV  + +   GLVGH+HLNK L
Sbjct: 951  GRKYCRENAAYLVKNQLKKASLKDTAVEFMIEYV-KQHAVSGSSEPGTGLVGHIHLNKLL 1009

Query: 2536 LEESKISMEEILTKCEESLNSFRKKKKVGQLFKKIALDCSEC-SFNQS--SKSNWTPCLK 2706
            L++  +SM+E+  KCEE++NSFRKKK VG  FKKI L   EC +F  S  SK +  PCL 
Sbjct: 1010 LQDLNVSMQEVCQKCEETINSFRKKKNVGPFFKKIILSFRECCTFQHSCQSKGSDMPCLL 1069

Query: 2707 FFWQDTPDIHLEKTAHIFADAVCPVLLNAIIKGDPRVKEANITWISPETTGWIGNPSKEQ 2886
            FFWQ   D +LE+  HI A  +CPVLL  IIKGD RV   NI WISP+TT WI NP K +
Sbjct: 1070 FFWQGNRDDNLEQILHILAHKICPVLLQTIIKGDSRVCTVNIIWISPDTTTWIRNPCKSR 1129

Query: 2887 KGELAINVVLEKEAVKKNGDAWRTVMDSCLPIIHLIDTTRSIPYAIKQVENLLGIACTFE 3066
            KGELA+++VLEK AVK+ GDAWR V+D+CLP++HLIDT RSIPYAIKQV+ LLGI+C F+
Sbjct: 1130 KGELALDIVLEKAAVKQRGDAWRIVLDACLPVLHLIDTRRSIPYAIKQVQELLGISCAFD 1189

Query: 3067 QAIQRLSTSVSMVTKGMLKEHLLLLASSMTCAGILVGFNQAGIKALSKALNFQAPFSEAT 3246
            QA+QRLS SV+MV KG+LKEHL+LLA+SMTCAG L+GFN  G KALS+ALN Q PF+EAT
Sbjct: 1190 QAVQRLSKSVTMVAKGVLKEHLILLANSMTCAGNLIGFNSGGYKALSRALNLQVPFTEAT 1249

Query: 3247 VYTPKKCFEKAAEKCHADSLSSIVGACSWGKPVAVGTGSRFDILWDTREVELNQKDGIDV 3426
            ++TP+KCFEKA+EKCH DSLSSIV +CSWGK V VGTGSRFD+LWDT+E+   Q  GID+
Sbjct: 1250 LFTPRKCFEKASEKCHTDSLSSIVASCSWGKHVTVGTGSRFDVLWDTKEIGPAQDGGIDI 1309

Query: 3427 YNFLNLVR-GVSEEEADNECLGGDLDYYELEDNYMEAG-SPELESGSAKPVFEDGLDL-N 3597
            Y+FL+LVR G   +E D  CLG +++   LED  +E G SPE  S   KPVFED  +  N
Sbjct: 1310 YSFLHLVRSGSYGKEPDTACLGAEVEDLILEDENLELGMSPEHSSNFEKPVFEDSAEFQN 1369

Query: 3598 IDEMDVDRTGG-------KSTWESGPAPEDXXXXXXXXXXXXXXXXXXXXXXXSDKDLQE 3756
              E  V  +GG       K T  S   P                            +   
Sbjct: 1370 TWENHVPGSGGDWAVNQNKETTASTLKPS-----AWSSWGTDKVTMKDTFSTREPDESSR 1424

Query: 3757 TGSW---GGWGANKSQEDVVPSEPWGKKNDDSAAGGGWGTKNSDTNTEKGSS-WGHKAAK 3924
            +  W   G WG +K+Q     +  + + ++DS    G      D   +  SS WG K  +
Sbjct: 1425 SAGWDDKGTWGTDKAQ-----NTAFRRTHEDSPRSSGRDETFRDGRPQFASSAWGKKIDE 1479

Query: 3925 ADETGWGSNN 3954
            AD+TGW  N+
Sbjct: 1480 ADKTGWNKND 1489


>gb|PHT40964.1| DNA-directed RNA polymerase V subunit 1 [Capsicum baccatum]
          Length = 2007

 Score = 1522 bits (3940), Expect = 0.0
 Identities = 790/1338 (59%), Positives = 972/1338 (72%), Gaps = 18/1338 (1%)
 Frame = +1

Query: 1    CLKFKSKRPQAKSIGVLERAFTACCEDAAQVTVNEAKTADGACYLELKVPSRSRRDGIWD 180
            CLK K+++ Q   +GVLER  ++CCED +Q++V E KT+DGA YLELKVP  + +   W 
Sbjct: 101  CLKMKNRKFQVNHVGVLERMLSSCCEDVSQISVCEGKTSDGAAYLELKVPKNAAKLQEWI 160

Query: 181  FLDRYGYHYGDGIARPLLPSEVLIILKKIPDATKKKLAGRGCFFQEGYIMQHLPVPPNCL 360
            FL++YGY YGDG +RPLLPSEVL IL++I + TKKKL+ +G + Q+GYI+Q+LPVPPNCL
Sbjct: 161  FLEKYGYRYGDGYSRPLLPSEVLAILRRIREDTKKKLSAKGYYPQDGYILQYLPVPPNCL 220

Query: 361  STPDVSDGISVMSSDISMTMLKKVLRQVEIIKSSRSGHPNFESLEVEVNDLQAAVAQYLQ 540
            S PD+SDG S+MSSD S+TML+KVLRQ++IIKSSRSG PNFE+ EVE NDLQAAV QYLQ
Sbjct: 221  SVPDISDGNSIMSSDHSITMLRKVLRQIDIIKSSRSGTPNFEAHEVEANDLQAAVVQYLQ 280

Query: 541  SRGA-KTSPDRNTRYGIAKEQTESSSTKAWLEKMKTLFISKGSGFSSRSVITGDPYKGVG 717
             RG  K S D + R+G+ KE  +S+ TKAWLEKMKTLFI KGSGFSSRSVITGDPYKGVG
Sbjct: 281  FRGTGKASRDVDKRFGVNKEAVDST-TKAWLEKMKTLFIRKGSGFSSRSVITGDPYKGVG 339

Query: 718  EIGIPFEIAQRITFEERVTEYNMKSLQKLVDDKLCLTYRDGQSTYSLREGSKGHTFLKPG 897
            EIG+P EIAQ+ITFEERV+++NM  LQKLVD+KLCLTY+DG STYSLREGSKGHTFL+PG
Sbjct: 340  EIGLPCEIAQKITFEERVSQHNMAYLQKLVDEKLCLTYKDGSSTYSLREGSKGHTFLRPG 399

Query: 898  QVVHRKIMEGDVIFINRPPTTHKHSLQALSVYIHEDHTFKINPLICGPLSADFDGDCIHI 1077
            Q+VHR+IM+GD +FINRPPTTHKHSLQALSVY+H+DHT KINPL+CGPLSADFDGDCIH+
Sbjct: 400  QIVHRRIMDGDTVFINRPPTTHKHSLQALSVYVHDDHTVKINPLMCGPLSADFDGDCIHL 459

Query: 1078 FYPQSPDAKAEVLELFAVEKQLLSSHSGHVNLQLGTDSVLSXXXXXXXXXXXXAEVQQXX 1257
            FYPQS  AKAEV+ELF+V KQLLSSH+G+ NLQL TDS+LS            A  QQ  
Sbjct: 460  FYPQSLAAKAEVMELFSVGKQLLSSHTGNFNLQLATDSLLSLKLMFSNYFFHRAAAQQLA 519

Query: 1258 XXXXXXXXXXXXXXVRDSGPVWTVLELLETSLPRGFDCNGDKFVIRDSKILKLDYSRDXX 1437
                          VR SG +WT L++L T+LP  FD  G+   I  S+ L +DY+RD  
Sbjct: 520  MFLQMALPDPALVDVRKSGTMWTTLQILGTALPDLFDSCGETHTIGKSQFLGIDYNRDMI 579

Query: 1438 XXXXXXXXXXXFFTKGPNEVLKLFNSLQPLLMENLSKEGFNISLEDFIIPKPXXXXXXXX 1617
                       +F KGPN+VLK FNSLQPLLMENL  EGF++SL DF + K         
Sbjct: 580  SSILNDVITAIYFMKGPNDVLKFFNSLQPLLMENLCTEGFSVSLRDFYMSKAVRDGIQER 639

Query: 1618 XXXXXXXXRHLRKNYNEVIALQVDKRLRLVKNPISDFILRYSSMGNLIDVKSDSAVTKIV 1797
                     +LR +YNE + +Q++  LR  K P+ DF+LR S MG LID KS+SA  K+V
Sbjct: 640  IQCLSKLLNNLRSSYNESVEVQLEHYLRNEKLPVIDFVLRLSDMGVLIDSKSESAFNKVV 699

Query: 1798 QQIGFLGLQILEKGRLYSKTLAEDLSIHFLGNYPFPDDYPYEEFGLVRNGLFHGLDPYQE 1977
            QQIGFLGLQI ++G+ YSKTL  D++  F   YP    YP EEFGLVR+ LFHGLDPYQE
Sbjct: 700  QQIGFLGLQISDRGKFYSKTLVNDMAQLFQKKYPSVGTYPSEEFGLVRSCLFHGLDPYQE 759

Query: 1978 MVHSICNREQMVRSSRGLTEPGTLFKNSMAILRDVVICYDGTVRNVCSNSIIQFEYGGV- 2154
            M+HSI +RE +VRS+RGLTEPGTLFKN MAILRDVVICYDGTVRNV SNSIIQFEYG   
Sbjct: 760  MIHSISSREVIVRSTRGLTEPGTLFKNLMAILRDVVICYDGTVRNVSSNSIIQFEYGASG 819

Query: 2155 ---THNFFAAGEPVGVLAATAMSNPAYKAVLDSSPNSNSSWDMMKEILFCGVNFKNVHND 2325
                 + F AG+PVGVLAATAMSNPAYKAVLDSSP+SNSSW+MMKEIL CGV+FKN  +D
Sbjct: 820  GSNLPSEFCAGDPVGVLAATAMSNPAYKAVLDSSPSSNSSWEMMKEILLCGVSFKNDVSD 879

Query: 2326 RRVVLYLNACDCGAKYCLENAAYLVKNHLRKVSLKDVALEFLIEYDRKQVAVDN-AIDAG 2502
            RRV+LYLN C C   YC E AAY+VKNHL KV LKD A EFLIEY  +Q   +N     G
Sbjct: 880  RRVILYLNDCGCRRGYCREKAAYVVKNHLSKVCLKDAADEFLIEYGGQQAGYENYETGTG 939

Query: 2503 LVGHVHLNKALLEESKISMEEILTKCEESLNSFRKKKKVGQLFKKIALDCSE-CSF--NQ 2673
            L+GH+HLN+  LE   IS+ E+  +C+E ++SF++KKK+G LFK+I L  SE CSF    
Sbjct: 940  LIGHIHLNQRQLENLGISVLEVQERCQEKISSFKRKKKIGNLFKRIVLSVSEFCSFCHKS 999

Query: 2674 SSKSNWTPCLKFFWQDTPDIHLEKTAHIFADAVCPVLLNAIIKGDPRVKEANITWISPET 2853
             SK   TPCL+F W D  D HLE+ +HI AD +CP LL+ +IKGDPRV  ANI WISP+T
Sbjct: 1000 GSKCLSTPCLRFSWPDASDDHLERVSHILADMICPTLLDTVIKGDPRVSSANIAWISPDT 1059

Query: 2854 TGWIGNPSKEQKGELAINVVLEKEAVKKNGDAWRTVMDSCLPIIHLIDTTRSIPYAIKQV 3033
              WI +PSK Q+GELA+++VLE+EAVK+ GDAWR +MDSCLP+IHLIDTTRSIPYAIKQV
Sbjct: 1060 MSWIRSPSKSQRGELALDIVLEREAVKQRGDAWRILMDSCLPVIHLIDTTRSIPYAIKQV 1119

Query: 3034 ENLLGIACTFEQAIQRLSTSVSMVTKGMLKEHLLLLASSMTCAGILVGFNQAGIKALSKA 3213
            + L+GI+C FEQA++RLSTSV+MVTKG+LK+HL+LLA+SMTCAG LVGFN  GIKALS++
Sbjct: 1120 QELIGISCAFEQAVKRLSTSVTMVTKGVLKDHLVLLANSMTCAGNLVGFNAGGIKALSRS 1179

Query: 3214 LNFQAPFSEATVYTPKKCFEKAAEKCHADSLSSIVGACSWGKPVAVGTGSRFDILWDTRE 3393
            LN Q PF+EAT++TP+KCFE+AAEKCH DSLSSIV +CSWGK VAVGTGSRF+IL +T+ 
Sbjct: 1180 LNVQIPFTEATLFTPRKCFERAAEKCHVDSLSSIVASCSWGKHVAVGTGSRFEILLNTKN 1239

Query: 3394 VELNQKDGIDVYNFLNLVRGVSEEEAD-NECLGGDLDYYELEDNYMEAGSPELESGSAKP 3570
            VE N  D  DVY+FL+LVR  S +E +   CLG ++D  E +++     SP  +SGS  P
Sbjct: 1240 VEWNVPDARDVYSFLHLVRSTSAQEVEGTSCLGAEVDELEEDEDMGLYLSPNRDSGSDMP 1299

Query: 3571 VFEDGLDLNIDEMDVDRTGGKSTWESGPAPEDXXXXXXXXXXXXXXXXXXXXXXXSDKDL 3750
             FED  D   + +D  +  G S W+   +                          ++K +
Sbjct: 1300 TFEDRAD--FENLDEGKLSG-SAWDKASS--------ECAKSGGSWDMAGKTQNETEKGV 1348

Query: 3751 QETGSWGGWG--ANKSQEDVVPSE---PWGKKNDDSAAGGGWGTKNSDTNTE---KGSSW 3906
             ++ SW  WG   +++++ V  S+    WGKK D++ +      +N   N E    GS+W
Sbjct: 1349 NQSDSWSAWGKKVDEAEKGVSQSDSWSAWGKKVDEAVS-----DQNQSGNGEHLGSGSAW 1403

Query: 3907 GHKAAKADETGWGSNNPQ 3960
            G KA KAD      +NPQ
Sbjct: 1404 GVKANKAD------SNPQ 1415


>gb|PHU09752.1| DNA-directed RNA polymerase V subunit 1 [Capsicum chinense]
          Length = 2007

 Score = 1519 bits (3933), Expect = 0.0
 Identities = 788/1338 (58%), Positives = 972/1338 (72%), Gaps = 18/1338 (1%)
 Frame = +1

Query: 1    CLKFKSKRPQAKSIGVLERAFTACCEDAAQVTVNEAKTADGACYLELKVPSRSRRDGIWD 180
            CLK K+++ Q   +GVLER  ++CCED +Q++V E KT+DGA YLELKVP  + +   W 
Sbjct: 101  CLKMKNRKFQVNHVGVLERMLSSCCEDVSQISVCEGKTSDGAAYLELKVPKNAAKLQEWI 160

Query: 181  FLDRYGYHYGDGIARPLLPSEVLIILKKIPDATKKKLAGRGCFFQEGYIMQHLPVPPNCL 360
            FL++YGY YGDG +RPLLPSEVL IL++I + T+KKL+ +G + QEGYI+Q+LPVPPNCL
Sbjct: 161  FLEKYGYRYGDGYSRPLLPSEVLAILRRIREDTRKKLSAKGYYPQEGYILQYLPVPPNCL 220

Query: 361  STPDVSDGISVMSSDISMTMLKKVLRQVEIIKSSRSGHPNFESLEVEVNDLQAAVAQYLQ 540
            S PD+SDG S+MSSD S+TML+KVLRQ++IIKSSRSG PNFE+ EVE NDLQAAV QYLQ
Sbjct: 221  SVPDISDGNSIMSSDHSITMLRKVLRQIDIIKSSRSGTPNFEAHEVEANDLQAAVVQYLQ 280

Query: 541  SRGA-KTSPDRNTRYGIAKEQTESSSTKAWLEKMKTLFISKGSGFSSRSVITGDPYKGVG 717
             RG  K S D + R+G+ KE  +++ TKAWLEKMKTLFI KGSGFSSRSVITGDPYKGVG
Sbjct: 281  FRGTGKASRDVDKRFGVNKEAVDTT-TKAWLEKMKTLFIRKGSGFSSRSVITGDPYKGVG 339

Query: 718  EIGIPFEIAQRITFEERVTEYNMKSLQKLVDDKLCLTYRDGQSTYSLREGSKGHTFLKPG 897
            EIG+P EIAQ+ITFEERV+++NM  LQKLVD+KLCLTY+DG STYSLREGSKGHTFL+PG
Sbjct: 340  EIGLPCEIAQKITFEERVSQHNMAYLQKLVDEKLCLTYKDGSSTYSLREGSKGHTFLRPG 399

Query: 898  QVVHRKIMEGDVIFINRPPTTHKHSLQALSVYIHEDHTFKINPLICGPLSADFDGDCIHI 1077
            Q+VHR+IM+GD +FINRPPTTHKHSLQALSVY+H+DHT KINPL+CGPLSADFDGDCIH+
Sbjct: 400  QIVHRRIMDGDTVFINRPPTTHKHSLQALSVYVHDDHTVKINPLMCGPLSADFDGDCIHL 459

Query: 1078 FYPQSPDAKAEVLELFAVEKQLLSSHSGHVNLQLGTDSVLSXXXXXXXXXXXXAEVQQXX 1257
            FYPQS  AKAEV+ELF+V KQLLSSH+G+ NLQL TDS+LS            A  QQ  
Sbjct: 460  FYPQSLAAKAEVMELFSVGKQLLSSHTGNFNLQLATDSLLSLKLMFSNYFFHRAAAQQLA 519

Query: 1258 XXXXXXXXXXXXXXVRDSGPVWTVLELLETSLPRGFDCNGDKFVIRDSKILKLDYSRDXX 1437
                          VR SG +WT L++L T+LP  FD  G+   I  S+ L +DY+RD  
Sbjct: 520  MFLQMALPDPALVDVRKSGTMWTTLQILGTALPDLFDSCGETHTIGKSQFLGIDYNRDMI 579

Query: 1438 XXXXXXXXXXXFFTKGPNEVLKLFNSLQPLLMENLSKEGFNISLEDFIIPKPXXXXXXXX 1617
                       +F KGPN+VLK FNSLQPLLMENL  EGF++SL DF + K         
Sbjct: 580  SSILNDVITAIYFMKGPNDVLKFFNSLQPLLMENLCTEGFSVSLRDFYMSKAVRDGIQER 639

Query: 1618 XXXXXXXXRHLRKNYNEVIALQVDKRLRLVKNPISDFILRYSSMGNLIDVKSDSAVTKIV 1797
                     +LR +YNE + +Q++  LR  K P+ DF+LR S MG LID KS+SA  K+V
Sbjct: 640  IQCLSKLLNNLRSSYNESVEVQLEHYLRNEKLPVIDFVLRLSDMGVLIDSKSESAFNKVV 699

Query: 1798 QQIGFLGLQILEKGRLYSKTLAEDLSIHFLGNYPFPDDYPYEEFGLVRNGLFHGLDPYQE 1977
            QQIGFLGLQI ++G+ YSKTL  D++  F   YP    YP EEFGLVR+ LFHGLDPYQE
Sbjct: 700  QQIGFLGLQISDRGKFYSKTLVNDMAQLFQKKYPSVGTYPSEEFGLVRSCLFHGLDPYQE 759

Query: 1978 MVHSICNREQMVRSSRGLTEPGTLFKNSMAILRDVVICYDGTVRNVCSNSIIQFEYGGV- 2154
            M+HSI +RE +VRS+RGLTEPGTLFKN MAILRDVVICYDGTVRNV SNSIIQFEYG   
Sbjct: 760  MIHSISSREVIVRSTRGLTEPGTLFKNLMAILRDVVICYDGTVRNVSSNSIIQFEYGASG 819

Query: 2155 ---THNFFAAGEPVGVLAATAMSNPAYKAVLDSSPNSNSSWDMMKEILFCGVNFKNVHND 2325
                 + F AG+PVGVLAATAMSNPAYKAVLDSSP+SNSSW+MMKEIL CGV+FKN  +D
Sbjct: 820  GSNLPSEFCAGDPVGVLAATAMSNPAYKAVLDSSPSSNSSWEMMKEILLCGVSFKNDVSD 879

Query: 2326 RRVVLYLNACDCGAKYCLENAAYLVKNHLRKVSLKDVALEFLIEYDRKQVAVDN-AIDAG 2502
            RRV+LYLN C C   YC E AAY+VKNHL KV LKD A EFLIEY  +Q   +N     G
Sbjct: 880  RRVILYLNDCGCRRGYCREKAAYVVKNHLSKVCLKDAADEFLIEYGGQQAGYENYETGTG 939

Query: 2503 LVGHVHLNKALLEESKISMEEILTKCEESLNSFRKKKKVGQLFKKIALDCSE-CSF--NQ 2673
            L+GH+HLN+  LE   IS+ E+  +C+E ++SF++KKK+G LFK+I L  SE CSF    
Sbjct: 940  LIGHIHLNQRQLENLGISVLEVQERCQEKISSFKRKKKIGNLFKRIVLSVSEFCSFCHKS 999

Query: 2674 SSKSNWTPCLKFFWQDTPDIHLEKTAHIFADAVCPVLLNAIIKGDPRVKEANITWISPET 2853
             SK   TPCL+F W D  D HLE+ +HI AD +CP LL+ +IKGDPRV  ANI WISP+T
Sbjct: 1000 GSKCLSTPCLRFSWPDASDDHLERVSHILADMICPTLLDTVIKGDPRVSSANIAWISPDT 1059

Query: 2854 TGWIGNPSKEQKGELAINVVLEKEAVKKNGDAWRTVMDSCLPIIHLIDTTRSIPYAIKQV 3033
              WI +PSK Q+GELA+++VLE+EAVK+ GDAWR +MDSCLP+IHLIDTTRSIPYAIKQV
Sbjct: 1060 MSWIRSPSKSQRGELALDIVLEREAVKQRGDAWRILMDSCLPVIHLIDTTRSIPYAIKQV 1119

Query: 3034 ENLLGIACTFEQAIQRLSTSVSMVTKGMLKEHLLLLASSMTCAGILVGFNQAGIKALSKA 3213
            + L+GI+C FEQA++RLSTSV+MVTKG+LK+HL+LLA+SMTCAG LVGFN  GIKALS++
Sbjct: 1120 QELIGISCAFEQAVKRLSTSVTMVTKGVLKDHLVLLANSMTCAGNLVGFNAGGIKALSRS 1179

Query: 3214 LNFQAPFSEATVYTPKKCFEKAAEKCHADSLSSIVGACSWGKPVAVGTGSRFDILWDTRE 3393
            LN Q PF+EAT++TP+KCFE+AAEKCH DSLSSIV +CSWGK VAVGTGSRF+IL +T+ 
Sbjct: 1180 LNVQIPFTEATLFTPRKCFERAAEKCHVDSLSSIVASCSWGKHVAVGTGSRFEILLNTKN 1239

Query: 3394 VELNQKDGIDVYNFLNLVRGVSEEEAD-NECLGGDLDYYELEDNYMEAGSPELESGSAKP 3570
            VE N  D  DVY+FL+LVR  S +E +   CLG ++D  E +++     SP  +SGS  P
Sbjct: 1240 VEWNVPDARDVYSFLHLVRSTSAQEVEGTSCLGAEVDELEEDEDMGLYLSPNRDSGSDMP 1299

Query: 3571 VFEDGLDLNIDEMDVDRTGGKSTWESGPAPEDXXXXXXXXXXXXXXXXXXXXXXXSDKDL 3750
             FED  +   + +D  +  G S W+   +                          ++K +
Sbjct: 1300 TFEDRAE--FENLDEGKLSG-SAWDKASS--------ECAKSGGSWDMAGKTQNETEKGV 1348

Query: 3751 QETGSWGGWG--ANKSQEDVVPSE---PWGKKNDDSAAGGGWGTKNSDTNTE---KGSSW 3906
             ++ SW  WG   +++++ V  S+    WGKK D++ +      +N   N E    GS+W
Sbjct: 1349 NQSDSWSSWGKKVDEAEKGVSQSDSWSAWGKKVDEAVS-----DQNQSGNGEHLGSGSAW 1403

Query: 3907 GHKAAKADETGWGSNNPQ 3960
            G KA KAD      +NPQ
Sbjct: 1404 GVKANKAD------SNPQ 1415


>gb|PHT74769.1| DNA-directed RNA polymerase V subunit 1 [Capsicum annuum]
          Length = 2007

 Score = 1519 bits (3933), Expect = 0.0
 Identities = 788/1338 (58%), Positives = 972/1338 (72%), Gaps = 18/1338 (1%)
 Frame = +1

Query: 1    CLKFKSKRPQAKSIGVLERAFTACCEDAAQVTVNEAKTADGACYLELKVPSRSRRDGIWD 180
            CLK K+++ Q   +GVLER  ++CCED +Q++V E KT+DGA YLELKVP  + +   W 
Sbjct: 101  CLKMKNRKFQVNHVGVLERMLSSCCEDVSQISVCEGKTSDGAAYLELKVPKNAAKLQEWI 160

Query: 181  FLDRYGYHYGDGIARPLLPSEVLIILKKIPDATKKKLAGRGCFFQEGYIMQHLPVPPNCL 360
            FL++YGY YGDG +RPLLPSEVL IL++I + T+KKL+ +G + QEGYI+Q+LPVPPNCL
Sbjct: 161  FLEKYGYRYGDGYSRPLLPSEVLAILRRIREDTRKKLSAKGYYPQEGYILQYLPVPPNCL 220

Query: 361  STPDVSDGISVMSSDISMTMLKKVLRQVEIIKSSRSGHPNFESLEVEVNDLQAAVAQYLQ 540
            S PD+SDG S+MSSD S+TML+KVLRQ++IIKSSRSG PNFE+ EVE NDLQAAV QYLQ
Sbjct: 221  SVPDISDGNSIMSSDHSITMLRKVLRQIDIIKSSRSGTPNFEAHEVEANDLQAAVVQYLQ 280

Query: 541  SRGA-KTSPDRNTRYGIAKEQTESSSTKAWLEKMKTLFISKGSGFSSRSVITGDPYKGVG 717
             RG  K S D + R+G+ KE  +++ TKAWLEKMKTLFI KGSGFSSRSVITGDPYKGVG
Sbjct: 281  FRGTGKASRDVDKRFGVNKEAVDTT-TKAWLEKMKTLFIRKGSGFSSRSVITGDPYKGVG 339

Query: 718  EIGIPFEIAQRITFEERVTEYNMKSLQKLVDDKLCLTYRDGQSTYSLREGSKGHTFLKPG 897
            EIG+P EIAQ+ITFEERV+++NM  LQKLVD+KLCLTY+DG STYSLREGSKGHTFL+PG
Sbjct: 340  EIGLPCEIAQKITFEERVSQHNMAYLQKLVDEKLCLTYKDGSSTYSLREGSKGHTFLRPG 399

Query: 898  QVVHRKIMEGDVIFINRPPTTHKHSLQALSVYIHEDHTFKINPLICGPLSADFDGDCIHI 1077
            Q+VHR+IM+GD +FINRPPTTHKHSLQALSVY+H+DHT KINPL+CGPLSADFDGDCIH+
Sbjct: 400  QIVHRRIMDGDTVFINRPPTTHKHSLQALSVYVHDDHTVKINPLMCGPLSADFDGDCIHL 459

Query: 1078 FYPQSPDAKAEVLELFAVEKQLLSSHSGHVNLQLGTDSVLSXXXXXXXXXXXXAEVQQXX 1257
            FYPQS  AKAEV+ELF+V KQLLSSH+G+ NLQL TDS+LS            A  QQ  
Sbjct: 460  FYPQSLAAKAEVMELFSVGKQLLSSHTGNFNLQLATDSLLSLKLMFSNYFFHRAAAQQLA 519

Query: 1258 XXXXXXXXXXXXXXVRDSGPVWTVLELLETSLPRGFDCNGDKFVIRDSKILKLDYSRDXX 1437
                          VR SG +WT L++L T+LP  FD  G+   I  S+ L +DY+RD  
Sbjct: 520  MFLQMALPDPALVDVRKSGTMWTTLQILGTALPDLFDSCGETHTIGKSQFLGIDYNRDMI 579

Query: 1438 XXXXXXXXXXXFFTKGPNEVLKLFNSLQPLLMENLSKEGFNISLEDFIIPKPXXXXXXXX 1617
                       +F KGPN+VLK FNSLQPLLMENL  EGF++SL DF + K         
Sbjct: 580  SSILNDVITAIYFMKGPNDVLKFFNSLQPLLMENLCTEGFSVSLRDFYMSKAVRDGIQER 639

Query: 1618 XXXXXXXXRHLRKNYNEVIALQVDKRLRLVKNPISDFILRYSSMGNLIDVKSDSAVTKIV 1797
                     +LR +YNE + +Q++  LR  K P+ DF+LR S MG LID KS+SA  K+V
Sbjct: 640  IQCLSKLLNNLRSSYNESVEVQLEHYLRNEKLPVIDFVLRLSDMGVLIDSKSESAFNKVV 699

Query: 1798 QQIGFLGLQILEKGRLYSKTLAEDLSIHFLGNYPFPDDYPYEEFGLVRNGLFHGLDPYQE 1977
            QQIGFLGLQI ++G+ YSKTL  D++  F   YP    YP EEFGLVR+ LFHGLDPYQE
Sbjct: 700  QQIGFLGLQISDRGKFYSKTLVNDMAQLFQKKYPSVGTYPSEEFGLVRSCLFHGLDPYQE 759

Query: 1978 MVHSICNREQMVRSSRGLTEPGTLFKNSMAILRDVVICYDGTVRNVCSNSIIQFEYGGV- 2154
            M+HSI +RE +VRS+RGLTEPGTLFKN MAILRDVVICYDGTVRNV SNSIIQFEYG   
Sbjct: 760  MIHSISSREVIVRSTRGLTEPGTLFKNLMAILRDVVICYDGTVRNVSSNSIIQFEYGASG 819

Query: 2155 ---THNFFAAGEPVGVLAATAMSNPAYKAVLDSSPNSNSSWDMMKEILFCGVNFKNVHND 2325
                 + F AG+PVGVLAATAMSNPAYKAVLDSSP+SNSSW+MMKEIL CGV+FKN  +D
Sbjct: 820  GSNLPSEFCAGDPVGVLAATAMSNPAYKAVLDSSPSSNSSWEMMKEILLCGVSFKNDVSD 879

Query: 2326 RRVVLYLNACDCGAKYCLENAAYLVKNHLRKVSLKDVALEFLIEYDRKQVAVDN-AIDAG 2502
            RRV+LYLN C C   YC E AAY+VKNHL KV LKD A EFLIEY  +Q   +N     G
Sbjct: 880  RRVILYLNDCGCRRGYCREKAAYVVKNHLSKVCLKDAADEFLIEYGGQQAGYENYETGTG 939

Query: 2503 LVGHVHLNKALLEESKISMEEILTKCEESLNSFRKKKKVGQLFKKIALDCSE-CSF--NQ 2673
            L+GH+HLN+  LE   IS+ E+  +C+E ++SF++KKK+G LFK+I L  SE CSF    
Sbjct: 940  LIGHIHLNQRQLENLGISVLEVQERCQEKISSFKRKKKIGNLFKRIVLSVSEFCSFCHKS 999

Query: 2674 SSKSNWTPCLKFFWQDTPDIHLEKTAHIFADAVCPVLLNAIIKGDPRVKEANITWISPET 2853
             SK   TPCL+F W D  D HLE+ +HI AD +CP LL+ +IKGDPRV  ANI WISP+T
Sbjct: 1000 GSKCLSTPCLRFSWPDASDDHLERVSHILADMICPTLLDTVIKGDPRVSSANIAWISPDT 1059

Query: 2854 TGWIGNPSKEQKGELAINVVLEKEAVKKNGDAWRTVMDSCLPIIHLIDTTRSIPYAIKQV 3033
              WI +PSK Q+GELA+++VLE+EAVK+ GDAWR +MDSCLP+IHLIDTTRSIPYAIKQV
Sbjct: 1060 MSWIRSPSKSQRGELALDIVLEREAVKQRGDAWRILMDSCLPVIHLIDTTRSIPYAIKQV 1119

Query: 3034 ENLLGIACTFEQAIQRLSTSVSMVTKGMLKEHLLLLASSMTCAGILVGFNQAGIKALSKA 3213
            + L+GI+C FEQA++RLSTSV+MVTKG+LK+HL+LLA+SMTCAG LVGFN  GIKALS++
Sbjct: 1120 QELIGISCAFEQAVKRLSTSVTMVTKGVLKDHLVLLANSMTCAGNLVGFNAGGIKALSRS 1179

Query: 3214 LNFQAPFSEATVYTPKKCFEKAAEKCHADSLSSIVGACSWGKPVAVGTGSRFDILWDTRE 3393
            LN Q PF+EAT++TP+KCFE+AAEKCH DSLSSIV +CSWGK VAVGTGSRF+IL +T+ 
Sbjct: 1180 LNVQIPFTEATLFTPRKCFERAAEKCHVDSLSSIVASCSWGKHVAVGTGSRFEILLNTKN 1239

Query: 3394 VELNQKDGIDVYNFLNLVRGVSEEEAD-NECLGGDLDYYELEDNYMEAGSPELESGSAKP 3570
            VE N  D  DVY+FL+LVR  S +E +   CLG ++D  E +++     SP  +SGS  P
Sbjct: 1240 VEWNVPDARDVYSFLHLVRSTSAQEVEGTSCLGAEVDELEEDEDMGLYLSPNRDSGSDMP 1299

Query: 3571 VFEDGLDLNIDEMDVDRTGGKSTWESGPAPEDXXXXXXXXXXXXXXXXXXXXXXXSDKDL 3750
             FED  +   + +D  +  G S W+   +                          ++K +
Sbjct: 1300 TFEDRAE--FENLDEGKLSG-SAWDKASS--------ECAKSGGSWDMAGKTQNETEKGV 1348

Query: 3751 QETGSWGGWG--ANKSQEDVVPSE---PWGKKNDDSAAGGGWGTKNSDTNTE---KGSSW 3906
             ++ SW  WG   +++++ V  S+    WGKK D++ +      +N   N E    GS+W
Sbjct: 1349 NQSDSWSAWGKKVDEAEKGVSQSDSWSAWGKKVDEAVS-----DQNQSGNGEHLGSGSAW 1403

Query: 3907 GHKAAKADETGWGSNNPQ 3960
            G KA KAD      +NPQ
Sbjct: 1404 GVKANKAD------SNPQ 1415


>ref|XP_016557263.1| PREDICTED: DNA-directed RNA polymerase V subunit 1 [Capsicum annuum]
 ref|XP_016557264.1| PREDICTED: DNA-directed RNA polymerase V subunit 1 [Capsicum annuum]
          Length = 2007

 Score = 1518 bits (3931), Expect = 0.0
 Identities = 787/1338 (58%), Positives = 972/1338 (72%), Gaps = 18/1338 (1%)
 Frame = +1

Query: 1    CLKFKSKRPQAKSIGVLERAFTACCEDAAQVTVNEAKTADGACYLELKVPSRSRRDGIWD 180
            CLK K+++ Q   +GVLER  ++CCED +Q++V E KT+DGA YLELKVP  + +   W 
Sbjct: 101  CLKMKNRKFQVNHVGVLERMLSSCCEDVSQISVCEGKTSDGAAYLELKVPKNAAKLQEWI 160

Query: 181  FLDRYGYHYGDGIARPLLPSEVLIILKKIPDATKKKLAGRGCFFQEGYIMQHLPVPPNCL 360
            FL++YGY YGDG +RPLLPSEVL IL++I + T+KKL+ +G + QEGYI+Q+LPVPPNCL
Sbjct: 161  FLEKYGYRYGDGYSRPLLPSEVLAILRRIREDTRKKLSAKGYYPQEGYILQYLPVPPNCL 220

Query: 361  STPDVSDGISVMSSDISMTMLKKVLRQVEIIKSSRSGHPNFESLEVEVNDLQAAVAQYLQ 540
            S PD+SDG S+MSSD S+TML+KVLRQ++IIKSSRSG PNFE+ EVE NDLQAAV QYLQ
Sbjct: 221  SVPDISDGNSIMSSDHSITMLRKVLRQIDIIKSSRSGTPNFEAHEVEANDLQAAVVQYLQ 280

Query: 541  SRGA-KTSPDRNTRYGIAKEQTESSSTKAWLEKMKTLFISKGSGFSSRSVITGDPYKGVG 717
             RG  K S D + R+G+ KE  +++ TKAWLEKMKTLFI KGSGFSSRSVITGDPYKGVG
Sbjct: 281  FRGTGKASRDVDKRFGVNKEAVDTT-TKAWLEKMKTLFIRKGSGFSSRSVITGDPYKGVG 339

Query: 718  EIGIPFEIAQRITFEERVTEYNMKSLQKLVDDKLCLTYRDGQSTYSLREGSKGHTFLKPG 897
            EIG+P EIAQ+ITFEERV+++NM  LQKLVD+KLCLTY+DG STYSLREGSKGHTFL+PG
Sbjct: 340  EIGLPCEIAQKITFEERVSQHNMAYLQKLVDEKLCLTYKDGSSTYSLREGSKGHTFLRPG 399

Query: 898  QVVHRKIMEGDVIFINRPPTTHKHSLQALSVYIHEDHTFKINPLICGPLSADFDGDCIHI 1077
            Q+VHR+IM+GD +FINRPPTTHKHSLQALSVY+H+DHT KINPL+CGPLSADFDGDCIH+
Sbjct: 400  QIVHRRIMDGDTVFINRPPTTHKHSLQALSVYVHDDHTVKINPLMCGPLSADFDGDCIHL 459

Query: 1078 FYPQSPDAKAEVLELFAVEKQLLSSHSGHVNLQLGTDSVLSXXXXXXXXXXXXAEVQQXX 1257
            FYPQS  AKAEV+ELF+V KQ+LSSH+G+ NLQL TDS+LS            A  QQ  
Sbjct: 460  FYPQSLAAKAEVMELFSVGKQILSSHTGNFNLQLATDSLLSLKLMFSNYFFHRAAAQQLA 519

Query: 1258 XXXXXXXXXXXXXXVRDSGPVWTVLELLETSLPRGFDCNGDKFVIRDSKILKLDYSRDXX 1437
                          VR SG +WT L++L T+LP  FD  G+   I  S+ L +DY+RD  
Sbjct: 520  MFLQMALPDPALVDVRKSGTMWTTLQILGTALPDLFDSCGETHTIGKSQFLGIDYNRDMI 579

Query: 1438 XXXXXXXXXXXFFTKGPNEVLKLFNSLQPLLMENLSKEGFNISLEDFIIPKPXXXXXXXX 1617
                       +F KGPN+VLK FNSLQPLLMENL  EGF++SL DF + K         
Sbjct: 580  SSILNDVITAIYFMKGPNDVLKFFNSLQPLLMENLCTEGFSVSLRDFYMSKAVRDGIQER 639

Query: 1618 XXXXXXXXRHLRKNYNEVIALQVDKRLRLVKNPISDFILRYSSMGNLIDVKSDSAVTKIV 1797
                     +LR +YNE + +Q++  LR  K P+ DF+LR S MG LID KS+SA  K+V
Sbjct: 640  IQCLSKLLNNLRSSYNESVEVQLEHYLRNEKLPVIDFVLRLSDMGVLIDSKSESAFNKVV 699

Query: 1798 QQIGFLGLQILEKGRLYSKTLAEDLSIHFLGNYPFPDDYPYEEFGLVRNGLFHGLDPYQE 1977
            QQIGFLGLQI ++G+ YSKTL  D++  F   YP    YP EEFGLVR+ LFHGLDPYQE
Sbjct: 700  QQIGFLGLQISDRGKFYSKTLVNDMAQLFQKKYPSVGTYPSEEFGLVRSCLFHGLDPYQE 759

Query: 1978 MVHSICNREQMVRSSRGLTEPGTLFKNSMAILRDVVICYDGTVRNVCSNSIIQFEYGGV- 2154
            M+HSI +RE +VRS+RGLTEPGTLFKN MAILRDVVICYDGTVRNV SNSIIQFEYG   
Sbjct: 760  MIHSISSREVIVRSTRGLTEPGTLFKNLMAILRDVVICYDGTVRNVSSNSIIQFEYGASG 819

Query: 2155 ---THNFFAAGEPVGVLAATAMSNPAYKAVLDSSPNSNSSWDMMKEILFCGVNFKNVHND 2325
                 + F AG+PVGVLAATAMSNPAYKAVLDSSP+SNSSW+MMKEIL CGV+FKN  +D
Sbjct: 820  GSNLPSEFCAGDPVGVLAATAMSNPAYKAVLDSSPSSNSSWEMMKEILLCGVSFKNDVSD 879

Query: 2326 RRVVLYLNACDCGAKYCLENAAYLVKNHLRKVSLKDVALEFLIEYDRKQVAVDN-AIDAG 2502
            RRV+LYLN C C   YC E AAY+VKNHL KV LKD A EFLIEY  +Q   +N     G
Sbjct: 880  RRVILYLNDCGCRRGYCREKAAYVVKNHLSKVCLKDAADEFLIEYGGQQAGYENYETGTG 939

Query: 2503 LVGHVHLNKALLEESKISMEEILTKCEESLNSFRKKKKVGQLFKKIALDCSE-CSF--NQ 2673
            L+GH+HLN+  LE   IS+ E+  +C+E ++SF++KKK+G LFK+I L  SE CSF    
Sbjct: 940  LIGHIHLNQRQLENLGISVLEVQERCQEKISSFKRKKKIGNLFKRIVLSVSEFCSFCHKS 999

Query: 2674 SSKSNWTPCLKFFWQDTPDIHLEKTAHIFADAVCPVLLNAIIKGDPRVKEANITWISPET 2853
             SK   TPCL+F W D  D HLE+ +HI AD +CP LL+ +IKGDPRV  ANI WISP+T
Sbjct: 1000 GSKCLSTPCLRFSWPDASDDHLERVSHILADMICPTLLDTVIKGDPRVSSANIAWISPDT 1059

Query: 2854 TGWIGNPSKEQKGELAINVVLEKEAVKKNGDAWRTVMDSCLPIIHLIDTTRSIPYAIKQV 3033
              WI +PSK Q+GELA+++VLE+EAVK+ GDAWR +MDSCLP+IHLIDTTRSIPYAIKQV
Sbjct: 1060 MSWIRSPSKSQRGELALDIVLEREAVKQRGDAWRILMDSCLPVIHLIDTTRSIPYAIKQV 1119

Query: 3034 ENLLGIACTFEQAIQRLSTSVSMVTKGMLKEHLLLLASSMTCAGILVGFNQAGIKALSKA 3213
            + L+GI+C FEQA++RLSTSV+MVTKG+LK+HL+LLA+SMTCAG LVGFN  GIKALS++
Sbjct: 1120 QELIGISCAFEQAVKRLSTSVTMVTKGVLKDHLVLLANSMTCAGNLVGFNAGGIKALSRS 1179

Query: 3214 LNFQAPFSEATVYTPKKCFEKAAEKCHADSLSSIVGACSWGKPVAVGTGSRFDILWDTRE 3393
            LN Q PF+EAT++TP+KCFE+AAEKCH DSLSSIV +CSWGK VAVGTGSRF+IL +T+ 
Sbjct: 1180 LNVQIPFTEATLFTPRKCFERAAEKCHVDSLSSIVASCSWGKHVAVGTGSRFEILLNTKN 1239

Query: 3394 VELNQKDGIDVYNFLNLVRGVSEEEAD-NECLGGDLDYYELEDNYMEAGSPELESGSAKP 3570
            VE N  D  DVY+FL+LVR  S +E +   CLG ++D  E +++     SP  +SGS  P
Sbjct: 1240 VEWNVPDARDVYSFLHLVRSTSAQEVEGTSCLGAEVDELEEDEDMGLYLSPNRDSGSDMP 1299

Query: 3571 VFEDGLDLNIDEMDVDRTGGKSTWESGPAPEDXXXXXXXXXXXXXXXXXXXXXXXSDKDL 3750
             FED  +   + +D  +  G S W+   +                          ++K +
Sbjct: 1300 TFEDRAE--FENLDEGKLSG-SAWDKASS--------ECAKSGGSWDMAGKTQNETEKGV 1348

Query: 3751 QETGSWGGWG--ANKSQEDVVPSE---PWGKKNDDSAAGGGWGTKNSDTNTE---KGSSW 3906
             ++ SW  WG   +++++ V  S+    WGKK D++ +      +N   N E    GS+W
Sbjct: 1349 NQSDSWSAWGKKVDEAEKGVSQSDSWSAWGKKVDEAVS-----DQNQSGNGEHLGSGSAW 1403

Query: 3907 GHKAAKADETGWGSNNPQ 3960
            G KA KAD      +NPQ
Sbjct: 1404 GVKANKAD------SNPQ 1415


>ref|XP_017257953.1| PREDICTED: DNA-directed RNA polymerase V subunit 1 [Daucus carota
            subsp. sativus]
 gb|KZM90293.1| hypothetical protein DCAR_022342 [Daucus carota subsp. sativus]
          Length = 2116

 Score = 1516 bits (3925), Expect = 0.0
 Identities = 784/1333 (58%), Positives = 970/1333 (72%), Gaps = 19/1333 (1%)
 Frame = +1

Query: 1    CLKFKSKRPQAKSIGVLERAFTACCEDAAQVTVNEAKTADGACYLELKVPSRSRR-DGIW 177
            CLK K+K+ Q K++GV ER  ++CCE+A+QV+++E KT+DGACYL+LK+PSRS   +G W
Sbjct: 105  CLKVKNKKNQTKNVGVAERVLSSCCEEASQVSISEEKTSDGACYLQLKLPSRSHPPNGFW 164

Query: 178  DFLDRYGYHYGDGIARPLLPSEVLIILKKIPDATKKKLAGRGCFFQEGYIMQHLPVPPNC 357
             FL+RYG+ YGD   RPLLP+EV++IL+KIP  +KKKL G+G F QEGYI+QHLPVPPNC
Sbjct: 165  HFLERYGFRYGDDHCRPLLPAEVMVILRKIPQESKKKLIGKGFFAQEGYILQHLPVPPNC 224

Query: 358  LSTPDVSDGISVMSSDISMTMLKKVLRQVEIIKSSRSGHPNFESLEVEVNDLQAAVAQYL 537
            LS PDVSDG SVMSSD S+++LKKVLRQ ++IKS+RSG  NFES EVE NDLQ AV+QYL
Sbjct: 225  LSVPDVSDGSSVMSSDHSISVLKKVLRQADVIKSTRSGIQNFESTEVEANDLQVAVSQYL 284

Query: 538  QSRG-AKTSPDRNTRYGIAKEQTESSSTKAWLEKMKTLFISKGSGFSSRSVITGDPYKGV 714
            + RG AK S D + R+GI KE   +SSTK WLEKM+TLFI KGSGFSSRS+ITGDPYK V
Sbjct: 285  EVRGTAKASRDVDGRFGIKKEG--NSSTKVWLEKMRTLFIRKGSGFSSRSIITGDPYKDV 342

Query: 715  GEIGIPFEIAQRITFEERVTEYNMKSLQKLVDDKLCLTYRDGQSTYSLREGSKGHTFLKP 894
            GEIG+PFEIAQRITFEE+V ++NM  LQKLVD KLCL Y+DG +TYSLREGSKGHTFL+P
Sbjct: 343  GEIGLPFEIAQRITFEEKVNQHNMMYLQKLVDQKLCLAYKDGSTTYSLREGSKGHTFLRP 402

Query: 895  GQVVHRKIMEGDVIFINRPPTTHKHSLQALSVYIHEDHTFKINPLICGPLSADFDGDCIH 1074
            GQVVHR+IM+GD++FINRPPTTHKHSLQAL VYIH+DHT KINPLIC PLSADFDGD IH
Sbjct: 403  GQVVHRRIMDGDIVFINRPPTTHKHSLQALKVYIHDDHTVKINPLICAPLSADFDGDAIH 462

Query: 1075 IFYPQSPDAKAEVLELFAVEKQLLSSHSGHVNLQLGTDSVLSXXXXXXXXXXXXAEVQQX 1254
            +FYPQS  AKAEVLELF+VEKQLLSSHSG++NLQL TDSVLS            A  QQ 
Sbjct: 463  LFYPQSLAAKAEVLELFSVEKQLLSSHSGNLNLQLATDSVLSLKLMFKKYFFGRAATQQL 522

Query: 1255 XXXXXXXXXXXXXXXVRDSGPVWTVLELLETSLPRGFDCNGDKFVIRDSKILKLDYSRDX 1434
                            + S  +WTVL+LL+ SLP  FDC G++  I  S+IL +DY+RD 
Sbjct: 523  AMFVSGVLPIPALLRAQSSDSLWTVLQLLQISLPPKFDCCGERHNIWQSQILDVDYNRDL 582

Query: 1435 XXXXXXXXXXXXFFTKGPNEVLKLFNSLQPLLMENLSKEGFNISLEDFIIPKPXXXXXXX 1614
                        FF KGP E L+ F+S+QP+LMENL  EGF++ LEDF +PK        
Sbjct: 583  MQSIINDVVSSIFFGKGPIEALRFFDSVQPMLMENLYTEGFSVGLEDFYVPKEIIQNCEA 642

Query: 1615 XXXXXXXXXRHLRKNYNEVIALQVDKRLRLVKNPISDFILRYSSMGNLIDVKSDSAVTKI 1794
                       +R+++NE+IALQ+++++R ++ PI++ IL+ S++G LID KS+SA+ K+
Sbjct: 643  RIQEYSSILYRMRESHNELIALQLERQIRSLRVPIANQILKSSAIGYLIDSKSESAINKV 702

Query: 1795 VQQIGFLGLQILEKGRLYSKTLAEDLSIHFLGNYPFPDDYPYEEFGLVRNGLFHGLDPYQ 1974
            VQQ+GFLGLQI ++G+ YSKTL  D++  F   YP    YP EE+GLVR  L HGLDPYQ
Sbjct: 703  VQQVGFLGLQISDRGKFYSKTLVADIASLFRTKYPSGASYPSEEYGLVRGCLIHGLDPYQ 762

Query: 1975 EMVHSICNREQMVRSSRGLTEPGTLFKNSMAILRDVVICYDGTVRNVCSNSIIQFEYGGV 2154
             +VHSI +RE +VRSSRGLTEPGTLFKN MAILRDV+ICYDGTVRNVCSNSIIQFEYG  
Sbjct: 763  SIVHSISSREVIVRSSRGLTEPGTLFKNLMAILRDVIICYDGTVRNVCSNSIIQFEYGMQ 822

Query: 2155 T----HNFFAAGEPVGVLAATAMSNPAYKAVLDSSPNSNSSWDMMKEILFCGVNFKNVHN 2322
            T     + FAAGEPVGVLAATAMSNPAYKAVLDSSP+SN+SW MMKEIL CG  FKN   
Sbjct: 823  TGTLSQSIFAAGEPVGVLAATAMSNPAYKAVLDSSPSSNNSWAMMKEILLCGATFKNDEV 882

Query: 2323 DRRVVLYLNACDCGAKYCLENAAYLVKNHLRKVSLKDVALEFLIEYDRKQVAVDNA-IDA 2499
            DRRV+LYLN CDCG K+C ENAAY+VK  L+++SLKD A+EFLIEY+ +Q    +A IDA
Sbjct: 883  DRRVILYLNGCDCGRKHCGENAAYMVKKQLKRISLKDAAVEFLIEYNSQQTDYCSANIDA 942

Query: 2500 GLVGHVHLNKALLEESKISMEEILTKCEESLNSFRKKKK--VGQLFKKIALDCSE-CSFN 2670
            GLVGH HLN+ L+++S + ++++  KC+++L+ F KKKK  VG LF +I L  S+ CSF 
Sbjct: 943  GLVGHFHLNEDLMKDSNVRIDDVFEKCQDTLHKFSKKKKGRVGILFSRIGLSVSQFCSFR 1002

Query: 2671 QS--SKSNWTPCLKFFWQDTPDIHLEKTAHIFADAVCPVLLNAIIKGDPRVKEANITWIS 2844
            Q+  SK    PCLKFFW+D+ DIHLEK AHIF+  +CPVLL  IIKGDPRV  A+I W+S
Sbjct: 1003 QTPGSKGCDMPCLKFFWKDSTDIHLEKAAHIFSSTICPVLLETIIKGDPRVCSADIIWVS 1062

Query: 2845 PETTGWIGNPSKEQKGELAINVVLEKEAVKKNGDAWRTVMDSCLPIIHLIDTTRSIPYAI 3024
            P+TT WI N S  +KGELAI+VVL+K++VK+ GDAWR V+DSCLP+IHLIDT RS+PY++
Sbjct: 1063 PDTTSWIRNRSSSEKGELAIDVVLDKKSVKQTGDAWRIVLDSCLPVIHLIDTRRSVPYSV 1122

Query: 3025 KQVENLLGIACTFEQAIQRLSTSVSMVTKGMLKEHLLLLASSMTCAGILVGFNQAGIKAL 3204
            KQ++ LLGI+C FEQAIQRLSTSV+MVTKG+L+EHL+LLA+SMT +G LVGFN+AGIKAL
Sbjct: 1123 KQLQELLGISCAFEQAIQRLSTSVTMVTKGVLREHLILLANSMTYSGNLVGFNKAGIKAL 1182

Query: 3205 SKALNFQAPFSEATVYTPKKCFEKAAEKCHADSLSSIVGACSWGKPVAVGTGSRFDILWD 3384
            S++LN Q PF+EAT++TPKKCFE AAEKCH DSL+SIV +CSWGK VAVGTGS FD+LWD
Sbjct: 1183 SRSLNVQVPFTEATLFTPKKCFETAAEKCHVDSLASIVASCSWGKHVAVGTGSSFDLLWD 1242

Query: 3385 TREVELNQKDGIDVYNFLNLVRGVSEEEADNECLGGDLDYYELEDNYMEAGSPELESGSA 3564
            TRE EL    G DVY+FL+LV   S  E ++ CLG ++D  +   +Y E     + + S 
Sbjct: 1243 TREAELK---GTDVYDFLSLVNSSSGVEKNSACLGAEIDDLDWAFDYDEEALSPVHA-SE 1298

Query: 3565 KPVFEDGLDLNIDEMDVDRTGGKSTWESGPAPEDXXXXXXXXXXXXXXXXXXXXXXXSDK 3744
            KPVFED +D+   E       G  T E G                               
Sbjct: 1299 KPVFEDIIDIENPE---GNGWGNGTTEPG------------------------------- 1324

Query: 3745 DLQETGSWGGWGANKSQEDVVPSEPWGKKNDD---SAAGGGWGTKNSD----TNTEKGSS 3903
               +     GW +  ++E     +PWGKK +         GW T +      +N E G  
Sbjct: 1325 --SDEVQVSGWNSMSNEE---AGDPWGKKVETPQVEVQVSGWDTMSDHHDKISNEESGDP 1379

Query: 3904 WGHKAAKADETGW 3942
            WG K     E+GW
Sbjct: 1380 WGSKVEIPQESGW 1392