BLASTX nr result

ID: Chrysanthemum22_contig00031911 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum22_contig00031911
         (351 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KVH93387.1| hypothetical protein Ccrd_004552, partial [Cynara...    76   8e-15
ref|XP_023764746.1| probable ubiquitin-like-specific protease 2B...    76   1e-13
ref|XP_021988092.1| probable ubiquitin-like-specific protease 2B...    60   3e-08

>gb|KVH93387.1| hypothetical protein Ccrd_004552, partial [Cynara cardunculus var.
           scolymus]
          Length = 168

 Score = 75.9 bits (185), Expect = 8e-15
 Identities = 44/91 (48%), Positives = 51/91 (56%)
 Frame = +3

Query: 78  KKLDTFVFDESAEAEENTSRWQXXXXXXXXXXXXTHSVVDNYDFLKAFAGGSVSKGKKVR 257
           KK   F+FDES E  E  SRW+             +S VD Y+FLK+FAGG   KGKK R
Sbjct: 5   KKFAEFLFDESDEVAEEKSRWKSTKSGKKKSRCG-NSPVDTYEFLKSFAGGVKPKGKKSR 63

Query: 258 NEXXXXXXXXXXXKERVVRSDTALQSSSSNH 350
           NE           KER+ RSD ALQSSSSN+
Sbjct: 64  NEPVIVHEVDEAVKERIFRSDAALQSSSSNN 94


>ref|XP_023764746.1| probable ubiquitin-like-specific protease 2B isoform X1 [Lactuca
           sativa]
 gb|PLY84735.1| hypothetical protein LSAT_5X109800 [Lactuca sativa]
          Length = 786

 Score = 75.9 bits (185), Expect = 1e-13
 Identities = 47/101 (46%), Positives = 57/101 (56%), Gaps = 3/101 (2%)
 Frame = +3

Query: 57  MGTLLSTK---KLDTFVFDESAEAEENTSRWQXXXXXXXXXXXXTHSVVDNYDFLKAFAG 227
           MGT  S+K   +   FVFDES E  E  SRW              +S VDNY FL++ AG
Sbjct: 1   MGTSYSSKLFSEFPQFVFDESDELAEMKSRWNPTESGKKKFRSG-YSPVDNYTFLQSLAG 59

Query: 228 GSVSKGKKVRNEXXXXXXXXXXXKERVVRSDTALQSSSSNH 350
           G   KGKK+R+E           KER+VRSDTALQSSSS++
Sbjct: 60  GKERKGKKLRDETVIIHEDDDAVKERIVRSDTALQSSSSDY 100


>ref|XP_021988092.1| probable ubiquitin-like-specific protease 2B isoform X1 [Helianthus
           annuus]
 gb|OTG10646.1| putative ulp1 protease family, C-terminal catalytic
           domain-containing protein [Helianthus annuus]
          Length = 780

 Score = 60.5 bits (145), Expect = 3e-08
 Identities = 40/98 (40%), Positives = 54/98 (55%)
 Frame = +3

Query: 57  MGTLLSTKKLDTFVFDESAEAEENTSRWQXXXXXXXXXXXXTHSVVDNYDFLKAFAGGSV 236
           MG + S+KK   +VFD SA  EENT RW+             +S  DN+ FL++FA G+V
Sbjct: 1   MGMMYSSKKFKEYVFDVSAP-EENT-RWKSAQSRKNKSH---YSSEDNHKFLESFAVGNV 55

Query: 237 SKGKKVRNEXXXXXXXXXXXKERVVRSDTALQSSSSNH 350
           S+GKK R+             ER+ R   AL+SSSSN+
Sbjct: 56  SRGKKPRDGKSIVHEVDEMVNERICRPGAALESSSSNY 93


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