BLASTX nr result

ID: Chrysanthemum22_contig00031897 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum22_contig00031897
         (356 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KVI10429.1| hypothetical protein Ccrd_011206 [Cynara carduncu...    60   5e-08

>gb|KVI10429.1| hypothetical protein Ccrd_011206 [Cynara cardunculus var. scolymus]
          Length = 4880

 Score = 60.1 bits (144), Expect = 5e-08
 Identities = 45/118 (38%), Positives = 55/118 (46%), Gaps = 47/118 (39%)
 Frame = -3

Query: 294  TKKKKAESSGT-------TEANQ------NSQHEVT------------------------ 226
            + KKK+ S+GT       TE NQ      NS HEVT                        
Sbjct: 2306 SNKKKSVSAGTRSDNQMATEINQTVEPNLNSDHEVTGTDVTQQLPQQTSQDQGDDHSNLN 2365

Query: 225  --AALEMGVDMEETKTV--------GFMHGEMEDSGGIHNSDQL*MAFHVDDRGGNNT 82
              A  EM  +MEET+T+        GFMH EM D G + NS+Q+ MAFH D+RGGN T
Sbjct: 2366 QPAVQEMRAEMEETETIQAYAELGMGFMHEEMGDGGVLQNSNQIEMAFHADNRGGNIT 2423


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