BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum22_contig00031337
         (358 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_022018497.1| RNA-binding protein 28 isoform X2 [Helianthu...    81   2e-15
ref|XP_022018496.1| RNA-binding protein 28 isoform X1 [Helianthu...    81   2e-15
gb|KVI10688.1| Nucleotide-binding, alpha-beta plait, partial [Cy...    77   8e-14

>ref|XP_022018497.1| RNA-binding protein 28 isoform X2 [Helianthus annuus]
          Length = 982

 Score = 81.3 bits (199), Expect = 2e-15
 Identities = 55/122 (45%), Positives = 71/122 (58%), Gaps = 4/122 (3%)
 Frame = +3

Query: 3    NNSERTDKKPEFNKPMDRSNDLSRKRKTPNTFQENRKDKT---LETEGKPAKKQEFPPRN 173
            NN E  + K +F K +D+S+D SRKRKT    QENR  +T    +T  KPAKK+      
Sbjct: 829  NNDENAENKTDFRKSVDQSHDSSRKRKT----QENRIAETETKTKTGTKPAKKK-LAVSK 883

Query: 174  QPSGVQQDGKRFKSQRAPSDRITSGAARPST-GVANVPVKKRQREQELQNVDTNSTKRRK 350
            +P   QQ+GK  K++ A         ARP   GV +VP KKR R++ +QN DT  TKRRK
Sbjct: 884  EPLEAQQEGKELKARFA---------ARPGPIGVVDVPNKKRSRDKRVQNEDTVLTKRRK 934

Query: 351  NK 356
            NK
Sbjct: 935  NK 936


>ref|XP_022018496.1| RNA-binding protein 28 isoform X1 [Helianthus annuus]
 gb|OTF90935.1| putative RNA-binding (RRM/RBD/RNP motifs) family protein [Helianthus
            annuus]
          Length = 1019

 Score = 81.3 bits (199), Expect = 2e-15
 Identities = 55/122 (45%), Positives = 71/122 (58%), Gaps = 4/122 (3%)
 Frame = +3

Query: 3    NNSERTDKKPEFNKPMDRSNDLSRKRKTPNTFQENRKDKT---LETEGKPAKKQEFPPRN 173
            NN E  + K +F K +D+S+D SRKRKT    QENR  +T    +T  KPAKK+      
Sbjct: 866  NNDENAENKTDFRKSVDQSHDSSRKRKT----QENRIAETETKTKTGTKPAKKK-LAVSK 920

Query: 174  QPSGVQQDGKRFKSQRAPSDRITSGAARPST-GVANVPVKKRQREQELQNVDTNSTKRRK 350
            +P   QQ+GK  K++ A         ARP   GV +VP KKR R++ +QN DT  TKRRK
Sbjct: 921  EPLEAQQEGKELKARFA---------ARPGPIGVVDVPNKKRSRDKRVQNEDTVLTKRRK 971

Query: 351  NK 356
            NK
Sbjct: 972  NK 973


>gb|KVI10688.1| Nucleotide-binding, alpha-beta plait, partial [Cynara cardunculus
            var. scolymus]
          Length = 931

 Score = 76.6 bits (187), Expect = 8e-14
 Identities = 50/129 (38%), Positives = 76/129 (58%), Gaps = 11/129 (8%)
 Frame = +3

Query: 3    NNSERTDKKPEFNKPMDRSNDLSRKRKTPNTFQENRKDKTLETE------GKPAKKQEFP 164
            N++  + K   F+KP+++ ND S+KRKT    +E+R DKT+ETE      GKPAKK + P
Sbjct: 764  NDAHGSGKNANFHKPVNQPNDESKKRKTRGPTKESRNDKTVETEGAASEGGKPAKKYKTP 823

Query: 165  PR----NQPSGVQQDGKRFKSQRAPSDRITSGAARPSTGVANVPVKKRQRE-QELQNVDT 329
             +    ++     Q+ KR   + A  +  TSG+ARP+       +KKR R+ +E Q+ +T
Sbjct: 824  LKKLTDSKDQLAVQEEKRPNGRSAAMEGTTSGSARPTE-----IIKKRSRDPKEPQDEET 878

Query: 330  NSTKRRKNK 356
             S KRRKN+
Sbjct: 879  GSMKRRKNR 887