BLASTX nr result

ID: Chrysanthemum22_contig00031067 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum22_contig00031067
         (952 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KVI04323.1| Helicase, C-terminal [Cynara cardunculus var. sco...    79   2e-12
ref|XP_022021874.1| chromatin structure-remodeling complex prote...    59   8e-06
gb|OTF86807.1| putative SNF2-related, N-terminal domain-containi...    59   8e-06
ref|XP_022021873.1| chromatin structure-remodeling complex prote...    59   8e-06
ref|XP_022021872.1| chromatin structure-remodeling complex prote...    59   8e-06

>gb|KVI04323.1| Helicase, C-terminal [Cynara cardunculus var. scolymus]
          Length = 2874

 Score = 79.0 bits (193), Expect = 2e-12
 Identities = 75/245 (30%), Positives = 113/245 (46%), Gaps = 34/245 (13%)
 Frame = +2

Query: 320  QGEKVAGPK-DSFVATKSVLKAHDVNVVSKSADVSTVDTIVSTQAGKVVEPKDSSMATES 496
            QG K+A P  +S +  K  L A  +    KSAD ST+D   S    KVVE KD S+ATE+
Sbjct: 2057 QGSKLAEPSLNSSLNVKEQLSA--LAEADKSADTSTMDNSTSNHGEKVVEAKDISVATET 2114

Query: 497  VPETHDVNLLRKSADASAIDTSVTEGEKVVEPXXXXXXXXXXXXXQDVNVLSMSDTGIVD 676
              +THD      + + +  ++S+ E E+                  +V++LS +DT  VD
Sbjct: 2115 GSKTHD------AVEKTEPNSSLNEKEQ-------------PSTFAEVDMLSSADTSTVD 2155

Query: 677  GRVSTQVEMVVEPKESSVATESVSKTQN------------------VNVISKSDASTVGG 802
              ++   E VVEPK  SVATE+ SKT +                  +    +S   T+ G
Sbjct: 2156 NSINDHGEKVVEPKGLSVATEAGSKTHDSVQKTQPKDEPDPNKLVYLEEKRESKLETLDG 2215

Query: 803  SVSTQGEKVVK--------------LKVATENKDKATECSGSENADMDS-TDALVPKNEL 937
                  ++V K               K  TE++++ TE S SE+A  D+  +A V ++EL
Sbjct: 2216 REPKSSKEVEKRSHSGDCLPQEVEVSKAETEHEERVTEGSASEDAGKDNIAEAGVAESEL 2275

Query: 938  SAENK 952
             A+ K
Sbjct: 2276 CAQKK 2280


>ref|XP_022021874.1| chromatin structure-remodeling complex protein SYD isoform X3
            [Helianthus annuus]
          Length = 2637

 Score = 58.9 bits (141), Expect = 8e-06
 Identities = 53/177 (29%), Positives = 81/177 (45%), Gaps = 3/177 (1%)
 Frame = +2

Query: 431  TIVSTQAGKVVEP--KDSSMATESVPETHDVNLLRKSADASAIDTSVTEGEKVVEPXXXX 604
            ++   QA ++ EP  K SS   E      +V+ L KS  AS +D S++  ++ VEP    
Sbjct: 1964 SMARNQASEIAEPLPKSSSKVREKSSILVEVDTLSKSVGASRVDDSISTRKEKVEP---- 2019

Query: 605  XXXXXXXXXQDVNVLSMSDTGIVDGRVSTQVEMVVEPKESSVATESVSKTQNVNVISKSD 784
                     +DV V          G  S     + +PKE     ES++        SKS+
Sbjct: 2020 ---------KDVLVADK------PGSKSHDAVEIAKPKEDLDPKESINLVGERE--SKSE 2062

Query: 785  ASTVGGSVSTQGEKVVKLKVATENKDKATECSGSENADMDS-TDALVPKNELSAENK 952
            AS   G  S   ++V  L   TEN+++ATECS  E    D+ T+++  +NE+  E K
Sbjct: 2063 AS--AGKESKPSKEVELLTAVTENEEQATECSALEGGGKDNKTESVTSENEVLVEQK 2117


>gb|OTF86807.1| putative SNF2-related, N-terminal domain-containing protein
            [Helianthus annuus]
          Length = 2681

 Score = 58.9 bits (141), Expect = 8e-06
 Identities = 53/177 (29%), Positives = 81/177 (45%), Gaps = 3/177 (1%)
 Frame = +2

Query: 431  TIVSTQAGKVVEP--KDSSMATESVPETHDVNLLRKSADASAIDTSVTEGEKVVEPXXXX 604
            ++   QA ++ EP  K SS   E      +V+ L KS  AS +D S++  ++ VEP    
Sbjct: 1955 SMARNQASEIAEPLPKSSSKVREKSSILVEVDTLSKSVGASRVDDSISTRKEKVEP---- 2010

Query: 605  XXXXXXXXXQDVNVLSMSDTGIVDGRVSTQVEMVVEPKESSVATESVSKTQNVNVISKSD 784
                     +DV V          G  S     + +PKE     ES++        SKS+
Sbjct: 2011 ---------KDVLVADK------PGSKSHDAVEIAKPKEDLDPKESINLVGERE--SKSE 2053

Query: 785  ASTVGGSVSTQGEKVVKLKVATENKDKATECSGSENADMDS-TDALVPKNELSAENK 952
            AS   G  S   ++V  L   TEN+++ATECS  E    D+ T+++  +NE+  E K
Sbjct: 2054 AS--AGKESKPSKEVELLTAVTENEEQATECSALEGGGKDNKTESVTSENEVLVEQK 2108


>ref|XP_022021873.1| chromatin structure-remodeling complex protein SYD isoform X2
            [Helianthus annuus]
          Length = 2689

 Score = 58.9 bits (141), Expect = 8e-06
 Identities = 53/177 (29%), Positives = 81/177 (45%), Gaps = 3/177 (1%)
 Frame = +2

Query: 431  TIVSTQAGKVVEP--KDSSMATESVPETHDVNLLRKSADASAIDTSVTEGEKVVEPXXXX 604
            ++   QA ++ EP  K SS   E      +V+ L KS  AS +D S++  ++ VEP    
Sbjct: 1963 SMARNQASEIAEPLPKSSSKVREKSSILVEVDTLSKSVGASRVDDSISTRKEKVEP---- 2018

Query: 605  XXXXXXXXXQDVNVLSMSDTGIVDGRVSTQVEMVVEPKESSVATESVSKTQNVNVISKSD 784
                     +DV V          G  S     + +PKE     ES++        SKS+
Sbjct: 2019 ---------KDVLVADK------PGSKSHDAVEIAKPKEDLDPKESINLVGERE--SKSE 2061

Query: 785  ASTVGGSVSTQGEKVVKLKVATENKDKATECSGSENADMDS-TDALVPKNELSAENK 952
            AS   G  S   ++V  L   TEN+++ATECS  E    D+ T+++  +NE+  E K
Sbjct: 2062 AS--AGKESKPSKEVELLTAVTENEEQATECSALEGGGKDNKTESVTSENEVLVEQK 2116


>ref|XP_022021872.1| chromatin structure-remodeling complex protein SYD isoform X1
            [Helianthus annuus]
          Length = 2690

 Score = 58.9 bits (141), Expect = 8e-06
 Identities = 53/177 (29%), Positives = 81/177 (45%), Gaps = 3/177 (1%)
 Frame = +2

Query: 431  TIVSTQAGKVVEP--KDSSMATESVPETHDVNLLRKSADASAIDTSVTEGEKVVEPXXXX 604
            ++   QA ++ EP  K SS   E      +V+ L KS  AS +D S++  ++ VEP    
Sbjct: 1964 SMARNQASEIAEPLPKSSSKVREKSSILVEVDTLSKSVGASRVDDSISTRKEKVEP---- 2019

Query: 605  XXXXXXXXXQDVNVLSMSDTGIVDGRVSTQVEMVVEPKESSVATESVSKTQNVNVISKSD 784
                     +DV V          G  S     + +PKE     ES++        SKS+
Sbjct: 2020 ---------KDVLVADK------PGSKSHDAVEIAKPKEDLDPKESINLVGERE--SKSE 2062

Query: 785  ASTVGGSVSTQGEKVVKLKVATENKDKATECSGSENADMDS-TDALVPKNELSAENK 952
            AS   G  S   ++V  L   TEN+++ATECS  E    D+ T+++  +NE+  E K
Sbjct: 2063 AS--AGKESKPSKEVELLTAVTENEEQATECSALEGGGKDNKTESVTSENEVLVEQK 2117


Top