BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum22_contig00030912
         (423 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_017190481.1| PREDICTED: uncharacterized transmembrane pro...   109   6e-25
ref|XP_009368982.1| PREDICTED: protein RNA-directed DNA methylat...   109   7e-25
ref|XP_009368980.1| PREDICTED: protein RNA-directed DNA methylat...   109   7e-25
ref|XP_009368978.1| PREDICTED: protein RNA-directed DNA methylat...   109   7e-25
ref|XP_009368977.1| PREDICTED: protein RNA-directed DNA methylat...   109   7e-25
ref|XP_009368976.1| PREDICTED: protein RNA-directed DNA methylat...   109   7e-25
ref|XP_006004460.1| PREDICTED: cellular nucleic acid-binding pro...    98   5e-23
ref|XP_021837792.1| protein RNA-directed DNA methylation 3 isofo...   103   7e-23
ref|XP_021837790.1| protein RNA-directed DNA methylation 3 isofo...   103   7e-23
ref|XP_021837787.1| protein RNA-directed DNA methylation 3 isofo...   103   7e-23
ref|XP_021837791.1| protein RNA-directed DNA methylation 3 isofo...   103   7e-23
ref|XP_021837788.1| protein RNA-directed DNA methylation 3 isofo...   103   7e-23
ref|XP_019102664.1| PREDICTED: protein RNA-directed DNA methylat...   103   9e-23
ref|XP_011377814.1| zinc finger CCHC domain-containing protein 1...    97   1e-22
ref|XP_018505692.1| PREDICTED: protein RNA-directed DNA methylat...   102   1e-22
ref|XP_018505691.1| PREDICTED: protein RNA-directed DNA methylat...   102   1e-22
ref|XP_018505690.1| PREDICTED: protein RNA-directed DNA methylat...   102   1e-22
ref|XP_018505689.1| PREDICTED: protein RNA-directed DNA methylat...   102   1e-22
ref|XP_009368938.1| PREDICTED: protein RNA-directed DNA methylat...   102   1e-22
ref|XP_002154581.1| PREDICTED: cellular nucleic acid-binding pro...    97   2e-22

>ref|XP_017190481.1| PREDICTED: uncharacterized transmembrane protein DDB_G0289901-like
            [Malus domestica]
          Length = 779

 Score =  109 bits (272), Expect = 6e-25
 Identities = 62/170 (36%), Positives = 86/170 (50%), Gaps = 30/170 (17%)
 Frame = -1

Query: 420  CGENFHLAKDC----------GCYKCGETGHLTKDCNGRYGGPSG--CRKCGQVGHKARK 277
            CGE+ H++++C           C+KCGE+GH++++C    GG  G  C KCG+ GH +R+
Sbjct: 517  CGESGHMSRECPQGGGGGKGGACFKCGESGHMSRECPQGGGGGKGGACFKCGESGHMSRE 576

Query: 276  CDQXXXXXXXXXXXXXGETGHIAWECSQ--------CCSLCGKSGHMGKDCPE------- 142
            C Q             GE+GH++ EC Q         C  CG+SGHM ++CP+       
Sbjct: 577  CPQGGGGGKGGACFKCGESGHMSRECPQGGGGSKGGACFKCGESGHMSRECPQGGGGGKG 636

Query: 141  -LSCRCGENGHYPYECPKDRWSWNEDKVCCYICG-GEHMAKDCS-GVGCY 1
                +CGE GH   ECP+           CY CG   HMA+DCS G G Y
Sbjct: 637  GACFKCGEAGHMSRECPQGGGGGGGGG-ACYKCGESGHMARDCSQGGGSY 685



 Score = 99.0 bits (245), Expect = 3e-21
 Identities = 54/172 (31%), Positives = 84/172 (48%), Gaps = 38/172 (22%)
 Frame = -1

Query: 420  CGENFHLAKDC----------GCYKCGETGHLTKDCNGRYGGPSG--CRKCGQVGHKARK 277
            CGE+ H++++C           C+KCGE+GH++++C    GG  G  C KCG+ GH +R+
Sbjct: 542  CGESGHMSRECPQGGGGGKGGACFKCGESGHMSRECPQGGGGGKGGACFKCGESGHMSRE 601

Query: 276  CDQXXXXXXXXXXXXXGETGHIAWECSQ--------CCSLCGKSGHMGKDCPE------- 142
            C Q             GE+GH++ EC Q         C  CG++GHM ++CP+       
Sbjct: 602  CPQGGGGSKGGACFKCGESGHMSRECPQGGGGGKGGACFKCGEAGHMSRECPQGGGGGGG 661

Query: 141  --LSCRCGENGHYPYECPKDRWSW--------NEDKVCCYICG-GEHMAKDC 19
                 +CGE+GH   +C +   S+              C+ CG   HMA++C
Sbjct: 662  GGACYKCGESGHMARDCSQGGGSYGGGSRSGGGGXSGACFKCGESGHMAREC 713



 Score = 95.9 bits (237), Expect = 3e-20
 Identities = 50/141 (35%), Positives = 73/141 (51%), Gaps = 19/141 (13%)
 Frame = -1

Query: 384 CYKCGETGHLTKDCNGRYGGPSG--CRKCGQVGHKARKCDQXXXXXXXXXXXXXGETGHI 211
           C+KCGE+GH++++C    GG  G  C KCG+ GH +R+C Q             GE+GH+
Sbjct: 514 CFKCGESGHMSRECPQGGGGGKGGACFKCGESGHMSRECPQGGGGGKGGACFKCGESGHM 573

Query: 210 AWECSQ--------CCSLCGKSGHMGKDCPE--------LSCRCGENGHYPYECPKDRWS 79
           + EC Q         C  CG+SGHM ++CP+           +CGE+GH   ECP+    
Sbjct: 574 SRECPQGGGGGKGGACFKCGESGHMSRECPQGGGGSKGGACFKCGESGHMSRECPQGGGG 633

Query: 78  WNEDKVCCYICG-GEHMAKDC 19
                  C+ CG   HM+++C
Sbjct: 634 GKGG--ACFKCGEAGHMSREC 652



 Score = 92.0 bits (227), Expect = 7e-19
 Identities = 55/188 (29%), Positives = 83/188 (44%), Gaps = 50/188 (26%)
 Frame = -1

Query: 420  CGENFHLAKDC----------GCYKCGETGHLTKDCNGRYGGPSG--CRKCGQVGHKARK 277
            CGE+ H++++C           C+KCGE+GH++++C    GG  G  C KCG+ GH +R+
Sbjct: 592  CGESGHMSRECPQGGGGSKGGACFKCGESGHMSRECPQGGGGGKGGACFKCGEAGHMSRE 651

Query: 276  CDQXXXXXXXXXXXXXG-ETGHIAWECSQ------------------CCSLCGKSGHMGK 154
            C Q               E+GH+A +CSQ                   C  CG+SGHM +
Sbjct: 652  CPQGGGGGGGGGACYKCGESGHMARDCSQGGGSYGGGSRSGGGGXSGACFKCGESGHMAR 711

Query: 153  DCPE--------LSCRCGENGHYPYECPKDRWSWNED----------KVCCYICG-GEHM 31
            +CP+           +CGE+GH   +C +    +                CY CG   H 
Sbjct: 712  ECPQGGGGGSSGACYKCGESGHMARDCSQGGGGYGGGGRSGGGGGGASGGCYKCGQSGHF 771

Query: 30   AKDCSGVG 7
            A++C   G
Sbjct: 772  ARECPNSG 779



 Score = 76.6 bits (187), Expect = 2e-13
 Identities = 42/124 (33%), Positives = 59/124 (47%), Gaps = 17/124 (13%)
 Frame = -1

Query: 339 GRYGGPSGCRKCGQVGHKARKCDQXXXXXXXXXXXXXGETGHIAWECSQ--------CCS 184
           G  GG   C KCG+ GH +R+C Q             GE+GH++ EC Q         C 
Sbjct: 506 GGGGGSXACFKCGESGHMSRECPQGGGGGKGGACFKCGESGHMSRECPQGGGGGKGGACF 565

Query: 183 LCGKSGHMGKDCPE--------LSCRCGENGHYPYECPKDRWSWNEDKVCCYICG-GEHM 31
            CG+SGHM ++CP+           +CGE+GH   ECP+           C+ CG   HM
Sbjct: 566 KCGESGHMSRECPQGGGGGKGGACFKCGESGHMSRECPQG--GGGSKGGACFKCGESGHM 623

Query: 30  AKDC 19
           +++C
Sbjct: 624 SREC 627


>ref|XP_009368982.1| PREDICTED: protein RNA-directed DNA methylation 3-like isoform X5
            [Pyrus x bretschneideri]
          Length = 1496

 Score =  109 bits (272), Expect = 7e-25
 Identities = 59/167 (35%), Positives = 86/167 (51%), Gaps = 29/167 (17%)
 Frame = -1

Query: 420  CGENFHLAKDC----------GCYKCGETGHLTKDCNGRYGGPSG--CRKCGQVGHKARK 277
            CGE+ H++++C           C+KCGE+GH++++C    GG  G  C KCG+ GH +R+
Sbjct: 1291 CGESGHMSRECPQGGGGGKGGACFKCGESGHMSRECPQGGGGGKGGACFKCGESGHMSRE 1350

Query: 276  CDQXXXXXXXXXXXXXGETGHIAWECSQ--------CCSLCGKSGHMGKDCPE------- 142
            C Q             GE+GH++ EC +         C  CG+SGHM ++CP+       
Sbjct: 1351 CPQGGGGGKGGACFKCGESGHMSRECPKGGGGSKGGACFKCGESGHMSRECPKGGGGSDG 1410

Query: 141  -LSCRCGENGHYPYECPKDRWSWNEDKVCCYICG-GEHMAKDCSGVG 7
                +CGE+GH   ECP+     +     CY CG   HMA+DCS  G
Sbjct: 1411 GACFKCGESGHMARECPQGGGGGSSG--ACYKCGESGHMARDCSQGG 1455



 Score =  101 bits (251), Expect = 4e-22
 Identities = 53/141 (37%), Positives = 74/141 (52%), Gaps = 19/141 (13%)
 Frame = -1

Query: 384  CYKCGETGHLTKDCNGRYGGPSG--CRKCGQVGHKARKCDQXXXXXXXXXXXXXGETGHI 211
            C+KCGE+GH++++C    GG  G  C KCG+ GH +R+C Q             GE+GH+
Sbjct: 1288 CFKCGESGHMSRECPQGGGGGKGGACFKCGESGHMSRECPQGGGGGKGGACFKCGESGHM 1347

Query: 210  AWECSQ--------CCSLCGKSGHMGKDCPE--------LSCRCGENGHYPYECPKDRWS 79
            + EC Q         C  CG+SGHM ++CP+           +CGE+GH   ECPK    
Sbjct: 1348 SRECPQGGGGGKGGACFKCGESGHMSRECPKGGGGSKGGACFKCGESGHMSRECPKG--G 1405

Query: 78   WNEDKVCCYICG-GEHMAKDC 19
               D   C+ CG   HMA++C
Sbjct: 1406 GGSDGGACFKCGESGHMAREC 1426



 Score = 90.1 bits (222), Expect = 4e-18
 Identities = 48/153 (31%), Positives = 72/153 (47%), Gaps = 44/153 (28%)
 Frame = -1

Query: 420  CGENFHLAKDC----------GCYKCGETGHLTKDCNGRYGGPSG--CRKCGQVGHKARK 277
            CGE+ H++++C           C+KCGE+GH++++C    GG  G  C KCG+ GH +R+
Sbjct: 1341 CGESGHMSRECPQGGGGGKGGACFKCGESGHMSRECPKGGGGSKGGACFKCGESGHMSRE 1400

Query: 276  CDQXXXXXXXXXXXXXGETGHIAWECSQ--------CCSLCGKSGHMGKDCPELS----- 136
            C +             GE+GH+A EC Q         C  CG+SGHM +DC +       
Sbjct: 1401 CPKGGGGSDGGACFKCGESGHMARECPQGGGGGSSGACYKCGESGHMARDCSQGGGGYGG 1460

Query: 135  -------------------CRCGENGHYPYECP 94
                                +CG++GH+  ECP
Sbjct: 1461 GGRGSGGGCGRGSGGGGGCYKCGQSGHFARECP 1493



 Score = 77.4 bits (189), Expect = 1e-13
 Identities = 44/122 (36%), Positives = 60/122 (49%), Gaps = 18/122 (14%)
 Frame = -1

Query: 330  GGPSG-CRKCGQVGHKARKCDQXXXXXXXXXXXXXGETGHIAWECSQ--------CCSLC 178
            GG SG C KCG+ GH +R+C Q             GE+GH++ EC Q         C  C
Sbjct: 1282 GGSSGACFKCGESGHMSRECPQGGGGGKGGACFKCGESGHMSRECPQGGGGGKGGACFKC 1341

Query: 177  GKSGHMGKDCPE--------LSCRCGENGHYPYECPKDRWSWNEDKVCCYICG-GEHMAK 25
            G+SGHM ++CP+           +CGE+GH   ECPK           C+ CG   HM++
Sbjct: 1342 GESGHMSRECPQGGGGGKGGACFKCGESGHMSRECPKG--GGGSKGGACFKCGESGHMSR 1399

Query: 24   DC 19
            +C
Sbjct: 1400 EC 1401


>ref|XP_009368980.1| PREDICTED: protein RNA-directed DNA methylation 3-like isoform X4
            [Pyrus x bretschneideri]
          Length = 1503

 Score =  109 bits (272), Expect = 7e-25
 Identities = 59/167 (35%), Positives = 86/167 (51%), Gaps = 29/167 (17%)
 Frame = -1

Query: 420  CGENFHLAKDC----------GCYKCGETGHLTKDCNGRYGGPSG--CRKCGQVGHKARK 277
            CGE+ H++++C           C+KCGE+GH++++C    GG  G  C KCG+ GH +R+
Sbjct: 1298 CGESGHMSRECPQGGGGGKGGACFKCGESGHMSRECPQGGGGGKGGACFKCGESGHMSRE 1357

Query: 276  CDQXXXXXXXXXXXXXGETGHIAWECSQ--------CCSLCGKSGHMGKDCPE------- 142
            C Q             GE+GH++ EC +         C  CG+SGHM ++CP+       
Sbjct: 1358 CPQGGGGGKGGACFKCGESGHMSRECPKGGGGSKGGACFKCGESGHMSRECPKGGGGSDG 1417

Query: 141  -LSCRCGENGHYPYECPKDRWSWNEDKVCCYICG-GEHMAKDCSGVG 7
                +CGE+GH   ECP+     +     CY CG   HMA+DCS  G
Sbjct: 1418 GACFKCGESGHMARECPQGGGGGSSG--ACYKCGESGHMARDCSQGG 1462



 Score =  101 bits (251), Expect = 4e-22
 Identities = 53/141 (37%), Positives = 74/141 (52%), Gaps = 19/141 (13%)
 Frame = -1

Query: 384  CYKCGETGHLTKDCNGRYGGPSG--CRKCGQVGHKARKCDQXXXXXXXXXXXXXGETGHI 211
            C+KCGE+GH++++C    GG  G  C KCG+ GH +R+C Q             GE+GH+
Sbjct: 1295 CFKCGESGHMSRECPQGGGGGKGGACFKCGESGHMSRECPQGGGGGKGGACFKCGESGHM 1354

Query: 210  AWECSQ--------CCSLCGKSGHMGKDCPE--------LSCRCGENGHYPYECPKDRWS 79
            + EC Q         C  CG+SGHM ++CP+           +CGE+GH   ECPK    
Sbjct: 1355 SRECPQGGGGGKGGACFKCGESGHMSRECPKGGGGSKGGACFKCGESGHMSRECPKG--G 1412

Query: 78   WNEDKVCCYICG-GEHMAKDC 19
               D   C+ CG   HMA++C
Sbjct: 1413 GGSDGGACFKCGESGHMAREC 1433



 Score = 90.1 bits (222), Expect = 4e-18
 Identities = 48/153 (31%), Positives = 72/153 (47%), Gaps = 44/153 (28%)
 Frame = -1

Query: 420  CGENFHLAKDC----------GCYKCGETGHLTKDCNGRYGGPSG--CRKCGQVGHKARK 277
            CGE+ H++++C           C+KCGE+GH++++C    GG  G  C KCG+ GH +R+
Sbjct: 1348 CGESGHMSRECPQGGGGGKGGACFKCGESGHMSRECPKGGGGSKGGACFKCGESGHMSRE 1407

Query: 276  CDQXXXXXXXXXXXXXGETGHIAWECSQ--------CCSLCGKSGHMGKDCPELS----- 136
            C +             GE+GH+A EC Q         C  CG+SGHM +DC +       
Sbjct: 1408 CPKGGGGSDGGACFKCGESGHMARECPQGGGGGSSGACYKCGESGHMARDCSQGGGGYGG 1467

Query: 135  -------------------CRCGENGHYPYECP 94
                                +CG++GH+  ECP
Sbjct: 1468 GGRGSGGGCGRGSGGGGGCYKCGQSGHFARECP 1500



 Score = 77.4 bits (189), Expect = 1e-13
 Identities = 44/122 (36%), Positives = 60/122 (49%), Gaps = 18/122 (14%)
 Frame = -1

Query: 330  GGPSG-CRKCGQVGHKARKCDQXXXXXXXXXXXXXGETGHIAWECSQ--------CCSLC 178
            GG SG C KCG+ GH +R+C Q             GE+GH++ EC Q         C  C
Sbjct: 1289 GGSSGACFKCGESGHMSRECPQGGGGGKGGACFKCGESGHMSRECPQGGGGGKGGACFKC 1348

Query: 177  GKSGHMGKDCPE--------LSCRCGENGHYPYECPKDRWSWNEDKVCCYICG-GEHMAK 25
            G+SGHM ++CP+           +CGE+GH   ECPK           C+ CG   HM++
Sbjct: 1349 GESGHMSRECPQGGGGGKGGACFKCGESGHMSRECPKG--GGGSKGGACFKCGESGHMSR 1406

Query: 24   DC 19
            +C
Sbjct: 1407 EC 1408


>ref|XP_009368978.1| PREDICTED: protein RNA-directed DNA methylation 3-like isoform X2
            [Pyrus x bretschneideri]
          Length = 1507

 Score =  109 bits (272), Expect = 7e-25
 Identities = 59/167 (35%), Positives = 86/167 (51%), Gaps = 29/167 (17%)
 Frame = -1

Query: 420  CGENFHLAKDC----------GCYKCGETGHLTKDCNGRYGGPSG--CRKCGQVGHKARK 277
            CGE+ H++++C           C+KCGE+GH++++C    GG  G  C KCG+ GH +R+
Sbjct: 1302 CGESGHMSRECPQGGGGGKGGACFKCGESGHMSRECPQGGGGGKGGACFKCGESGHMSRE 1361

Query: 276  CDQXXXXXXXXXXXXXGETGHIAWECSQ--------CCSLCGKSGHMGKDCPE------- 142
            C Q             GE+GH++ EC +         C  CG+SGHM ++CP+       
Sbjct: 1362 CPQGGGGGKGGACFKCGESGHMSRECPKGGGGSKGGACFKCGESGHMSRECPKGGGGSDG 1421

Query: 141  -LSCRCGENGHYPYECPKDRWSWNEDKVCCYICG-GEHMAKDCSGVG 7
                +CGE+GH   ECP+     +     CY CG   HMA+DCS  G
Sbjct: 1422 GACFKCGESGHMARECPQGGGGGSSG--ACYKCGESGHMARDCSQGG 1466



 Score =  101 bits (251), Expect = 4e-22
 Identities = 53/141 (37%), Positives = 74/141 (52%), Gaps = 19/141 (13%)
 Frame = -1

Query: 384  CYKCGETGHLTKDCNGRYGGPSG--CRKCGQVGHKARKCDQXXXXXXXXXXXXXGETGHI 211
            C+KCGE+GH++++C    GG  G  C KCG+ GH +R+C Q             GE+GH+
Sbjct: 1299 CFKCGESGHMSRECPQGGGGGKGGACFKCGESGHMSRECPQGGGGGKGGACFKCGESGHM 1358

Query: 210  AWECSQ--------CCSLCGKSGHMGKDCPE--------LSCRCGENGHYPYECPKDRWS 79
            + EC Q         C  CG+SGHM ++CP+           +CGE+GH   ECPK    
Sbjct: 1359 SRECPQGGGGGKGGACFKCGESGHMSRECPKGGGGSKGGACFKCGESGHMSRECPKG--G 1416

Query: 78   WNEDKVCCYICG-GEHMAKDC 19
               D   C+ CG   HMA++C
Sbjct: 1417 GGSDGGACFKCGESGHMAREC 1437



 Score = 90.1 bits (222), Expect = 4e-18
 Identities = 48/153 (31%), Positives = 72/153 (47%), Gaps = 44/153 (28%)
 Frame = -1

Query: 420  CGENFHLAKDC----------GCYKCGETGHLTKDCNGRYGGPSG--CRKCGQVGHKARK 277
            CGE+ H++++C           C+KCGE+GH++++C    GG  G  C KCG+ GH +R+
Sbjct: 1352 CGESGHMSRECPQGGGGGKGGACFKCGESGHMSRECPKGGGGSKGGACFKCGESGHMSRE 1411

Query: 276  CDQXXXXXXXXXXXXXGETGHIAWECSQ--------CCSLCGKSGHMGKDCPELS----- 136
            C +             GE+GH+A EC Q         C  CG+SGHM +DC +       
Sbjct: 1412 CPKGGGGSDGGACFKCGESGHMARECPQGGGGGSSGACYKCGESGHMARDCSQGGGGYGG 1471

Query: 135  -------------------CRCGENGHYPYECP 94
                                +CG++GH+  ECP
Sbjct: 1472 GGRGSGGGCGRGSGGGGGCYKCGQSGHFARECP 1504



 Score = 77.4 bits (189), Expect = 1e-13
 Identities = 44/122 (36%), Positives = 60/122 (49%), Gaps = 18/122 (14%)
 Frame = -1

Query: 330  GGPSG-CRKCGQVGHKARKCDQXXXXXXXXXXXXXGETGHIAWECSQ--------CCSLC 178
            GG SG C KCG+ GH +R+C Q             GE+GH++ EC Q         C  C
Sbjct: 1293 GGSSGACFKCGESGHMSRECPQGGGGGKGGACFKCGESGHMSRECPQGGGGGKGGACFKC 1352

Query: 177  GKSGHMGKDCPE--------LSCRCGENGHYPYECPKDRWSWNEDKVCCYICG-GEHMAK 25
            G+SGHM ++CP+           +CGE+GH   ECPK           C+ CG   HM++
Sbjct: 1353 GESGHMSRECPQGGGGGKGGACFKCGESGHMSRECPKG--GGGSKGGACFKCGESGHMSR 1410

Query: 24   DC 19
            +C
Sbjct: 1411 EC 1412


>ref|XP_009368977.1| PREDICTED: protein RNA-directed DNA methylation 3-like isoform X3
            [Pyrus x bretschneideri]
          Length = 1507

 Score =  109 bits (272), Expect = 7e-25
 Identities = 59/167 (35%), Positives = 86/167 (51%), Gaps = 29/167 (17%)
 Frame = -1

Query: 420  CGENFHLAKDC----------GCYKCGETGHLTKDCNGRYGGPSG--CRKCGQVGHKARK 277
            CGE+ H++++C           C+KCGE+GH++++C    GG  G  C KCG+ GH +R+
Sbjct: 1302 CGESGHMSRECPQGGGGGKGGACFKCGESGHMSRECPQGGGGGKGGACFKCGESGHMSRE 1361

Query: 276  CDQXXXXXXXXXXXXXGETGHIAWECSQ--------CCSLCGKSGHMGKDCPE------- 142
            C Q             GE+GH++ EC +         C  CG+SGHM ++CP+       
Sbjct: 1362 CPQGGGGGKGGACFKCGESGHMSRECPKGGGGSKGGACFKCGESGHMSRECPKGGGGSDG 1421

Query: 141  -LSCRCGENGHYPYECPKDRWSWNEDKVCCYICG-GEHMAKDCSGVG 7
                +CGE+GH   ECP+     +     CY CG   HMA+DCS  G
Sbjct: 1422 GACFKCGESGHMARECPQGGGGGSSG--ACYKCGESGHMARDCSQGG 1466



 Score =  101 bits (251), Expect = 4e-22
 Identities = 53/141 (37%), Positives = 74/141 (52%), Gaps = 19/141 (13%)
 Frame = -1

Query: 384  CYKCGETGHLTKDCNGRYGGPSG--CRKCGQVGHKARKCDQXXXXXXXXXXXXXGETGHI 211
            C+KCGE+GH++++C    GG  G  C KCG+ GH +R+C Q             GE+GH+
Sbjct: 1299 CFKCGESGHMSRECPQGGGGGKGGACFKCGESGHMSRECPQGGGGGKGGACFKCGESGHM 1358

Query: 210  AWECSQ--------CCSLCGKSGHMGKDCPE--------LSCRCGENGHYPYECPKDRWS 79
            + EC Q         C  CG+SGHM ++CP+           +CGE+GH   ECPK    
Sbjct: 1359 SRECPQGGGGGKGGACFKCGESGHMSRECPKGGGGSKGGACFKCGESGHMSRECPKG--G 1416

Query: 78   WNEDKVCCYICG-GEHMAKDC 19
               D   C+ CG   HMA++C
Sbjct: 1417 GGSDGGACFKCGESGHMAREC 1437



 Score = 90.1 bits (222), Expect = 4e-18
 Identities = 48/153 (31%), Positives = 72/153 (47%), Gaps = 44/153 (28%)
 Frame = -1

Query: 420  CGENFHLAKDC----------GCYKCGETGHLTKDCNGRYGGPSG--CRKCGQVGHKARK 277
            CGE+ H++++C           C+KCGE+GH++++C    GG  G  C KCG+ GH +R+
Sbjct: 1352 CGESGHMSRECPQGGGGGKGGACFKCGESGHMSRECPKGGGGSKGGACFKCGESGHMSRE 1411

Query: 276  CDQXXXXXXXXXXXXXGETGHIAWECSQ--------CCSLCGKSGHMGKDCPELS----- 136
            C +             GE+GH+A EC Q         C  CG+SGHM +DC +       
Sbjct: 1412 CPKGGGGSDGGACFKCGESGHMARECPQGGGGGSSGACYKCGESGHMARDCSQGGGGYGG 1471

Query: 135  -------------------CRCGENGHYPYECP 94
                                +CG++GH+  ECP
Sbjct: 1472 GGRGSGGGCGRGSGGGGGCYKCGQSGHFARECP 1504



 Score = 77.4 bits (189), Expect = 1e-13
 Identities = 44/122 (36%), Positives = 60/122 (49%), Gaps = 18/122 (14%)
 Frame = -1

Query: 330  GGPSG-CRKCGQVGHKARKCDQXXXXXXXXXXXXXGETGHIAWECSQ--------CCSLC 178
            GG SG C KCG+ GH +R+C Q             GE+GH++ EC Q         C  C
Sbjct: 1293 GGSSGACFKCGESGHMSRECPQGGGGGKGGACFKCGESGHMSRECPQGGGGGKGGACFKC 1352

Query: 177  GKSGHMGKDCPE--------LSCRCGENGHYPYECPKDRWSWNEDKVCCYICG-GEHMAK 25
            G+SGHM ++CP+           +CGE+GH   ECPK           C+ CG   HM++
Sbjct: 1353 GESGHMSRECPQGGGGGKGGACFKCGESGHMSRECPKG--GGGSKGGACFKCGESGHMSR 1410

Query: 24   DC 19
            +C
Sbjct: 1411 EC 1412


>ref|XP_009368976.1| PREDICTED: protein RNA-directed DNA methylation 3-like isoform X1
            [Pyrus x bretschneideri]
          Length = 1517

 Score =  109 bits (272), Expect = 7e-25
 Identities = 59/167 (35%), Positives = 86/167 (51%), Gaps = 29/167 (17%)
 Frame = -1

Query: 420  CGENFHLAKDC----------GCYKCGETGHLTKDCNGRYGGPSG--CRKCGQVGHKARK 277
            CGE+ H++++C           C+KCGE+GH++++C    GG  G  C KCG+ GH +R+
Sbjct: 1312 CGESGHMSRECPQGGGGGKGGACFKCGESGHMSRECPQGGGGGKGGACFKCGESGHMSRE 1371

Query: 276  CDQXXXXXXXXXXXXXGETGHIAWECSQ--------CCSLCGKSGHMGKDCPE------- 142
            C Q             GE+GH++ EC +         C  CG+SGHM ++CP+       
Sbjct: 1372 CPQGGGGGKGGACFKCGESGHMSRECPKGGGGSKGGACFKCGESGHMSRECPKGGGGSDG 1431

Query: 141  -LSCRCGENGHYPYECPKDRWSWNEDKVCCYICG-GEHMAKDCSGVG 7
                +CGE+GH   ECP+     +     CY CG   HMA+DCS  G
Sbjct: 1432 GACFKCGESGHMARECPQGGGGGSSG--ACYKCGESGHMARDCSQGG 1476



 Score =  101 bits (251), Expect = 4e-22
 Identities = 53/141 (37%), Positives = 74/141 (52%), Gaps = 19/141 (13%)
 Frame = -1

Query: 384  CYKCGETGHLTKDCNGRYGGPSG--CRKCGQVGHKARKCDQXXXXXXXXXXXXXGETGHI 211
            C+KCGE+GH++++C    GG  G  C KCG+ GH +R+C Q             GE+GH+
Sbjct: 1309 CFKCGESGHMSRECPQGGGGGKGGACFKCGESGHMSRECPQGGGGGKGGACFKCGESGHM 1368

Query: 210  AWECSQ--------CCSLCGKSGHMGKDCPE--------LSCRCGENGHYPYECPKDRWS 79
            + EC Q         C  CG+SGHM ++CP+           +CGE+GH   ECPK    
Sbjct: 1369 SRECPQGGGGGKGGACFKCGESGHMSRECPKGGGGSKGGACFKCGESGHMSRECPKG--G 1426

Query: 78   WNEDKVCCYICG-GEHMAKDC 19
               D   C+ CG   HMA++C
Sbjct: 1427 GGSDGGACFKCGESGHMAREC 1447



 Score = 90.1 bits (222), Expect = 4e-18
 Identities = 48/153 (31%), Positives = 72/153 (47%), Gaps = 44/153 (28%)
 Frame = -1

Query: 420  CGENFHLAKDC----------GCYKCGETGHLTKDCNGRYGGPSG--CRKCGQVGHKARK 277
            CGE+ H++++C           C+KCGE+GH++++C    GG  G  C KCG+ GH +R+
Sbjct: 1362 CGESGHMSRECPQGGGGGKGGACFKCGESGHMSRECPKGGGGSKGGACFKCGESGHMSRE 1421

Query: 276  CDQXXXXXXXXXXXXXGETGHIAWECSQ--------CCSLCGKSGHMGKDCPELS----- 136
            C +             GE+GH+A EC Q         C  CG+SGHM +DC +       
Sbjct: 1422 CPKGGGGSDGGACFKCGESGHMARECPQGGGGGSSGACYKCGESGHMARDCSQGGGGYGG 1481

Query: 135  -------------------CRCGENGHYPYECP 94
                                +CG++GH+  ECP
Sbjct: 1482 GGRGSGGGCGRGSGGGGGCYKCGQSGHFARECP 1514



 Score = 77.4 bits (189), Expect = 1e-13
 Identities = 44/122 (36%), Positives = 60/122 (49%), Gaps = 18/122 (14%)
 Frame = -1

Query: 330  GGPSG-CRKCGQVGHKARKCDQXXXXXXXXXXXXXGETGHIAWECSQ--------CCSLC 178
            GG SG C KCG+ GH +R+C Q             GE+GH++ EC Q         C  C
Sbjct: 1303 GGSSGACFKCGESGHMSRECPQGGGGGKGGACFKCGESGHMSRECPQGGGGGKGGACFKC 1362

Query: 177  GKSGHMGKDCPE--------LSCRCGENGHYPYECPKDRWSWNEDKVCCYICG-GEHMAK 25
            G+SGHM ++CP+           +CGE+GH   ECPK           C+ CG   HM++
Sbjct: 1363 GESGHMSRECPQGGGGGKGGACFKCGESGHMSRECPKG--GGGSKGGACFKCGESGHMSR 1420

Query: 24   DC 19
            +C
Sbjct: 1421 EC 1422


>ref|XP_006004460.1| PREDICTED: cellular nucleic acid-binding protein [Latimeria
           chalumnae]
 ref|XP_014349009.1| PREDICTED: cellular nucleic acid-binding protein [Latimeria
           chalumnae]
 ref|XP_014349010.1| PREDICTED: cellular nucleic acid-binding protein [Latimeria
           chalumnae]
          Length = 162

 Score = 97.8 bits (242), Expect = 5e-23
 Identities = 54/143 (37%), Positives = 69/143 (48%), Gaps = 8/143 (5%)
 Frame = -1

Query: 420 CGENFHLAKDC-----GCYKCGETGHLTKDCNG-RYGGPSGCRKCGQVGHKARKCDQXXX 259
           CGE+ HLAKDC      CY CG++GH+ KDC G +      C  CG+ GH AR CD    
Sbjct: 42  CGESGHLAKDCDLQEDACYNCGKSGHIAKDCRGPKREREQCCYNCGKPGHLARDCDHAD- 100

Query: 258 XXXXXXXXXXGETGHIAWECSQCCSLCGKSGHMGKDCPELSC-RCGENGHYPYECPKDRW 82
                                Q C  CG+ GH+ KDC ++ C RCGE GH    C K   
Sbjct: 101 --------------------EQKCYSCGELGHIQKDCTKVKCYRCGETGHVAINCSK--- 137

Query: 81  SWNEDKVCCYICG-GEHMAKDCS 16
                +V CY CG   H+A++C+
Sbjct: 138 ---TSEVNCYRCGESGHLARECT 157



 Score = 80.1 bits (196), Expect = 4e-16
 Identities = 56/154 (36%), Positives = 69/154 (44%), Gaps = 26/154 (16%)
 Frame = -1

Query: 384 CYKCGETGHLTKDC--NGRYGGPSG---------CRKCGQVGHKARKCDQXXXXXXXXXX 238
           C+KC  TGH  +DC    R  G  G         C +CG+ GH A+ CD           
Sbjct: 5   CFKCKRTGHWARDCPTGSRGRGRRGRAYITPRDICYRCGESGHLAKDCD-----LQEDAC 59

Query: 237 XXXGETGHIAWEC-------SQCCSLCGKSGHMGKDC---PELSC-RCGENGHYPYECPK 91
              G++GHIA +C        QCC  CGK GH+ +DC    E  C  CGE GH   +C  
Sbjct: 60  YNCGKSGHIAKDCRGPKREREQCCYNCGKPGHLARDCDHADEQKCYSCGELGHIQKDC-- 117

Query: 90  DRWSWNEDKVCCYICGGE-HMAKDC---SGVGCY 1
                   KV CY CG   H+A +C   S V CY
Sbjct: 118 -------TKVKCYRCGETGHVAINCSKTSEVNCY 144


>ref|XP_021837792.1| protein RNA-directed DNA methylation 3 isoform X5 [Spinacia oleracea]
          Length = 1503

 Score =  103 bits (257), Expect = 7e-23
 Identities = 61/171 (35%), Positives = 77/171 (45%), Gaps = 33/171 (19%)
 Frame = -1

Query: 420  CGENFHLAKDC------------GCYKCGETGHLTKDC---NGRYGGPSGCRKCGQVGHK 286
            CGE  H+A++C             CYKCGE GH+ ++C    G  GG   C KCG+ GH 
Sbjct: 1030 CGEAGHMARECPSGGGGGGGGGGNCYKCGEAGHMARECPSGGGGGGGGGSCYKCGEAGHM 1089

Query: 285  ARKCDQXXXXXXXXXXXXXGETGHIAWECSQ---------CCSLCGKSGHMGKDCPE--- 142
            AR+C               GE GH+A EC            C  CG++GHM ++CP    
Sbjct: 1090 ARECPSGGGGGGSGSCYKCGEAGHMARECPSGGGGGRGGGSCYKCGEAGHMARECPSGGG 1149

Query: 141  ----LSC-RCGENGHYPYECPKDRWSWNEDKVCCYICG-GEHMAKDCSGVG 7
                 SC +CGE GH   ECP            CY CG   HMA++C   G
Sbjct: 1150 GGGGGSCYKCGEAGHMARECPSGGGGGGGGG-SCYKCGEAGHMARECPSGG 1199



 Score =  100 bits (248), Expect = 1e-21
 Identities = 61/170 (35%), Positives = 77/170 (45%), Gaps = 32/170 (18%)
 Frame = -1

Query: 420  CGENFHLAKDC----------GCYKCGETGHLTKDC--NGRYGGPSGCRKCGQVGHKARK 277
            CGE  H+A++C           CYKCGE GH+ ++C   G  GG   C KCG+ GH AR+
Sbjct: 980  CGEAGHMARECPTGGSGGGGGNCYKCGEAGHMARECPSGGGGGGGGNCYKCGEAGHMARE 1039

Query: 276  CDQ--XXXXXXXXXXXXXGETGHIAWECSQ---------CCSLCGKSGHMGKDCP----- 145
            C                 GE GH+A EC            C  CG++GHM ++CP     
Sbjct: 1040 CPSGGGGGGGGGGNCYKCGEAGHMARECPSGGGGGGGGGSCYKCGEAGHMARECPSGGGG 1099

Query: 144  --ELSC-RCGENGHYPYECPKDRWSWNEDKVCCYICG-GEHMAKDCSGVG 7
                SC +CGE GH   ECP            CY CG   HMA++C   G
Sbjct: 1100 GGSGSCYKCGEAGHMARECPSG-GGGGRGGGSCYKCGEAGHMARECPSGG 1148



 Score = 97.1 bits (240), Expect = 1e-20
 Identities = 55/148 (37%), Positives = 68/148 (45%), Gaps = 22/148 (14%)
 Frame = -1

Query: 384  CYKCGETGHLTKDC--NGRYGGPSGCRKCGQVGHKARKCDQXXXXXXXXXXXXXGETGHI 211
            CYKCGE GH+ ++C   G  GG   C KCG+ GH AR+C               GE GH+
Sbjct: 977  CYKCGEAGHMARECPTGGSGGGGGNCYKCGEAGHMARECPSGGGGGGGGNCYKCGEAGHM 1036

Query: 210  AWECSQ----------CCSLCGKSGHMGKDCPE--------LSC-RCGENGHYPYECPKD 88
            A EC             C  CG++GHM ++CP          SC +CGE GH   ECP  
Sbjct: 1037 ARECPSGGGGGGGGGGNCYKCGEAGHMARECPSGGGGGGGGGSCYKCGEAGHMARECPSG 1096

Query: 87   RWSWNEDKVCCYICG-GEHMAKDCSGVG 7
                      CY CG   HMA++C   G
Sbjct: 1097 GGGGGSGS--CYKCGEAGHMARECPSGG 1122



 Score = 87.8 bits (216), Expect = 2e-17
 Identities = 50/147 (34%), Positives = 65/147 (44%), Gaps = 38/147 (25%)
 Frame = -1

Query: 420  CGENFHLAKDC-----------GCYKCGETGHLTKDC--NGRYGGPSGCRKCGQVGHKAR 280
            CGE  H+A++C            CYKCGE GH+ ++C   G  GG   C KCG+ GH AR
Sbjct: 1108 CGEAGHMARECPSGGGGGRGGGSCYKCGEAGHMARECPSGGGGGGGGSCYKCGEAGHMAR 1167

Query: 279  KCDQXXXXXXXXXXXXXG-ETGHIAWECSQC--------------CSLCGKSGHMGKDCP 145
            +C                 E GH+A EC                 C  CG++GHM ++CP
Sbjct: 1168 ECPSGGGGGGGGGSCYKCGEAGHMARECPSGGGRGGGGGRGGGGNCYKCGEAGHMARECP 1227

Query: 144  EL---------SC-RCGENGHYPYECP 94
                       +C +CGE GH   ECP
Sbjct: 1228 SSGGGGGGGGGNCYKCGEAGHMARECP 1254



 Score = 73.6 bits (179), Expect = 2e-12
 Identities = 49/142 (34%), Positives = 61/142 (42%), Gaps = 20/142 (14%)
 Frame = -1

Query: 372  GETGHLTKDCNGRYGGPSG-CRKCGQVGHKARKCDQXXXXXXXXXXXXXGETGHIAWECS 196
            GE     K  +G  GG  G C KCG+ GH AR+C               GE GH+A EC 
Sbjct: 957  GEDRSWKKPASGGSGGGGGNCYKCGEAGHMARECPTGGSGGGGGNCYKCGEAGHMARECP 1016

Query: 195  Q--------CCSLCGKSGHMGKDCPE---------LSC-RCGENGHYPYECPKDRWSWNE 70
                      C  CG++GHM ++CP           +C +CGE GH   ECP        
Sbjct: 1017 SGGGGGGGGNCYKCGEAGHMARECPSGGGGGGGGGGNCYKCGEAGHMARECPSGGGGGGG 1076

Query: 69   DKVCCYICG-GEHMAKDCSGVG 7
                CY CG   HMA++C   G
Sbjct: 1077 GG-SCYKCGEAGHMARECPSGG 1097



 Score = 70.5 bits (171), Expect = 3e-11
 Identities = 39/123 (31%), Positives = 52/123 (42%), Gaps = 19/123 (15%)
 Frame = -1

Query: 420  CGENFHLAKDC-----------GCYKCGETGHLTKDC--------NGRYGGPSGCRKCGQ 298
            CGE  H+A++C            CYKCGE GH+ ++C         G  GG   C KCG+
Sbjct: 1159 CGEAGHMARECPSGGGGGGGGGSCYKCGEAGHMARECPSGGGRGGGGGRGGGGNCYKCGE 1218

Query: 297  VGHKARKCDQXXXXXXXXXXXXXGETGHIAWECSQCCSLCGKSGHMGKDCPELSCRCGEN 118
             GH AR+C                 +G         C  CG++GHM ++CP      G  
Sbjct: 1219 AGHMAREC---------------PSSGGGGGGGGGNCYKCGEAGHMARECPSGGRYGGGG 1263

Query: 117  GHY 109
            G Y
Sbjct: 1264 GSY 1266


>ref|XP_021837790.1| protein RNA-directed DNA methylation 3 isoform X3 [Spinacia oleracea]
          Length = 1582

 Score =  103 bits (257), Expect = 7e-23
 Identities = 61/171 (35%), Positives = 77/171 (45%), Gaps = 33/171 (19%)
 Frame = -1

Query: 420  CGENFHLAKDC------------GCYKCGETGHLTKDC---NGRYGGPSGCRKCGQVGHK 286
            CGE  H+A++C             CYKCGE GH+ ++C    G  GG   C KCG+ GH 
Sbjct: 1002 CGEAGHMARECPSGGGGGGGGGGNCYKCGEAGHMARECPSGGGGGGGGGSCYKCGEAGHM 1061

Query: 285  ARKCDQXXXXXXXXXXXXXGETGHIAWECSQ---------CCSLCGKSGHMGKDCPE--- 142
            AR+C               GE GH+A EC            C  CG++GHM ++CP    
Sbjct: 1062 ARECPSGGGGGGSGSCYKCGEAGHMARECPSGGGGGRGGGSCYKCGEAGHMARECPSGGG 1121

Query: 141  ----LSC-RCGENGHYPYECPKDRWSWNEDKVCCYICG-GEHMAKDCSGVG 7
                 SC +CGE GH   ECP            CY CG   HMA++C   G
Sbjct: 1122 GGGGGSCYKCGEAGHMARECPSGGGGGGGGG-SCYKCGEAGHMARECPSGG 1171



 Score =  101 bits (251), Expect = 4e-22
 Identities = 62/171 (36%), Positives = 78/171 (45%), Gaps = 33/171 (19%)
 Frame = -1

Query: 420  CGENFHLAKDC----------GCYKCGETGHLTKDC----NGRYGGPSGCRKCGQVGHKA 283
            CGE  H+A++C           CYKCGE GH+ ++C     G  GG   C KCG+ GH A
Sbjct: 977  CGEAGHMARECPSGGGGGGGGNCYKCGEAGHMARECPSGGGGGGGGGGNCYKCGEAGHMA 1036

Query: 282  RKCDQ-XXXXXXXXXXXXXGETGHIAWEC--------SQCCSLCGKSGHMGKDCPE---- 142
            R+C                GE GH+A EC        S  C  CG++GHM ++CP     
Sbjct: 1037 RECPSGGGGGGGGGSCYKCGEAGHMARECPSGGGGGGSGSCYKCGEAGHMARECPSGGGG 1096

Query: 141  ----LSC-RCGENGHYPYECPKDRWSWNEDKVCCYICG-GEHMAKDCSGVG 7
                 SC +CGE GH   ECP            CY CG   HMA++C   G
Sbjct: 1097 GRGGGSCYKCGEAGHMARECPSGGGGGGGGS--CYKCGEAGHMARECPSGG 1145



 Score = 92.0 bits (227), Expect = 8e-19
 Identities = 55/148 (37%), Positives = 68/148 (45%), Gaps = 22/148 (14%)
 Frame = -1

Query: 384  CYKCGETGHLTKDC--NGRYGGPSGCRKCGQVGHKARKCDQ--XXXXXXXXXXXXXGETG 217
            CYKCGE GH+ ++C   G  GG   C KCG+ GH AR+C                 GE G
Sbjct: 974  CYKCGEAGHMARECPSGGGGGGGGNCYKCGEAGHMARECPSGGGGGGGGGGNCYKCGEAG 1033

Query: 216  HIAWECSQ---------CCSLCGKSGHMGKDCP-------ELSC-RCGENGHYPYECPKD 88
            H+A EC            C  CG++GHM ++CP         SC +CGE GH   ECP  
Sbjct: 1034 HMARECPSGGGGGGGGGSCYKCGEAGHMARECPSGGGGGGSGSCYKCGEAGHMARECPSG 1093

Query: 87   RWSWNEDKVCCYICG-GEHMAKDCSGVG 7
                      CY CG   HMA++C   G
Sbjct: 1094 -GGGGRGGGSCYKCGEAGHMARECPSGG 1120



 Score = 87.8 bits (216), Expect = 2e-17
 Identities = 50/147 (34%), Positives = 65/147 (44%), Gaps = 38/147 (25%)
 Frame = -1

Query: 420  CGENFHLAKDC-----------GCYKCGETGHLTKDC--NGRYGGPSGCRKCGQVGHKAR 280
            CGE  H+A++C            CYKCGE GH+ ++C   G  GG   C KCG+ GH AR
Sbjct: 1080 CGEAGHMARECPSGGGGGRGGGSCYKCGEAGHMARECPSGGGGGGGGSCYKCGEAGHMAR 1139

Query: 279  KCDQXXXXXXXXXXXXXG-ETGHIAWECSQC--------------CSLCGKSGHMGKDCP 145
            +C                 E GH+A EC                 C  CG++GHM ++CP
Sbjct: 1140 ECPSGGGGGGGGGSCYKCGEAGHMARECPSGGGRGGGGGRGGGGNCYKCGEAGHMARECP 1199

Query: 144  EL---------SC-RCGENGHYPYECP 94
                       +C +CGE GH   ECP
Sbjct: 1200 SSGGGGGGGGGNCYKCGEAGHMARECP 1226



 Score = 74.3 bits (181), Expect = 1e-12
 Identities = 49/142 (34%), Positives = 60/142 (42%), Gaps = 20/142 (14%)
 Frame = -1

Query: 372  GETGHLTKDCNGRYGGPSGCRKCGQVGHKARKCDQXXXXXXXXXXXXXGETGHIAWECSQ 193
            GE     K  +G  GG   C KCG+ GH AR+C               GE GH+A EC  
Sbjct: 957  GEDRSWKKPASGGSGG--NCYKCGEAGHMARECPSGGGGGGGGNCYKCGEAGHMARECPS 1014

Query: 192  ----------CCSLCGKSGHMGKDCPE--------LSC-RCGENGHYPYECPKDRWSWNE 70
                       C  CG++GHM ++CP          SC +CGE GH   ECP        
Sbjct: 1015 GGGGGGGGGGNCYKCGEAGHMARECPSGGGGGGGGGSCYKCGEAGHMARECPSGGGGGGS 1074

Query: 69   DKVCCYICG-GEHMAKDCSGVG 7
                CY CG   HMA++C   G
Sbjct: 1075 GS--CYKCGEAGHMARECPSGG 1094



 Score = 70.5 bits (171), Expect = 3e-11
 Identities = 39/123 (31%), Positives = 52/123 (42%), Gaps = 19/123 (15%)
 Frame = -1

Query: 420  CGENFHLAKDC-----------GCYKCGETGHLTKDC--------NGRYGGPSGCRKCGQ 298
            CGE  H+A++C            CYKCGE GH+ ++C         G  GG   C KCG+
Sbjct: 1131 CGEAGHMARECPSGGGGGGGGGSCYKCGEAGHMARECPSGGGRGGGGGRGGGGNCYKCGE 1190

Query: 297  VGHKARKCDQXXXXXXXXXXXXXGETGHIAWECSQCCSLCGKSGHMGKDCPELSCRCGEN 118
             GH AR+C                 +G         C  CG++GHM ++CP      G  
Sbjct: 1191 AGHMAREC---------------PSSGGGGGGGGGNCYKCGEAGHMARECPSGGRYGGGG 1235

Query: 117  GHY 109
            G Y
Sbjct: 1236 GSY 1238


>ref|XP_021837787.1| protein RNA-directed DNA methylation 3 isoform X1 [Spinacia oleracea]
          Length = 1600

 Score =  103 bits (257), Expect = 7e-23
 Identities = 61/171 (35%), Positives = 77/171 (45%), Gaps = 33/171 (19%)
 Frame = -1

Query: 420  CGENFHLAKDC------------GCYKCGETGHLTKDC---NGRYGGPSGCRKCGQVGHK 286
            CGE  H+A++C             CYKCGE GH+ ++C    G  GG   C KCG+ GH 
Sbjct: 1030 CGEAGHMARECPSGGGGGGGGGGNCYKCGEAGHMARECPSGGGGGGGGGSCYKCGEAGHM 1089

Query: 285  ARKCDQXXXXXXXXXXXXXGETGHIAWECSQ---------CCSLCGKSGHMGKDCPE--- 142
            AR+C               GE GH+A EC            C  CG++GHM ++CP    
Sbjct: 1090 ARECPSGGGGGGSGSCYKCGEAGHMARECPSGGGGGRGGGSCYKCGEAGHMARECPSGGG 1149

Query: 141  ----LSC-RCGENGHYPYECPKDRWSWNEDKVCCYICG-GEHMAKDCSGVG 7
                 SC +CGE GH   ECP            CY CG   HMA++C   G
Sbjct: 1150 GGGGGSCYKCGEAGHMARECPSGGGGGGGGG-SCYKCGEAGHMARECPSGG 1199



 Score =  100 bits (248), Expect = 1e-21
 Identities = 61/170 (35%), Positives = 77/170 (45%), Gaps = 32/170 (18%)
 Frame = -1

Query: 420  CGENFHLAKDC----------GCYKCGETGHLTKDC--NGRYGGPSGCRKCGQVGHKARK 277
            CGE  H+A++C           CYKCGE GH+ ++C   G  GG   C KCG+ GH AR+
Sbjct: 980  CGEAGHMARECPTGGSGGGGGNCYKCGEAGHMARECPSGGGGGGGGNCYKCGEAGHMARE 1039

Query: 276  CDQ--XXXXXXXXXXXXXGETGHIAWECSQ---------CCSLCGKSGHMGKDCP----- 145
            C                 GE GH+A EC            C  CG++GHM ++CP     
Sbjct: 1040 CPSGGGGGGGGGGNCYKCGEAGHMARECPSGGGGGGGGGSCYKCGEAGHMARECPSGGGG 1099

Query: 144  --ELSC-RCGENGHYPYECPKDRWSWNEDKVCCYICG-GEHMAKDCSGVG 7
                SC +CGE GH   ECP            CY CG   HMA++C   G
Sbjct: 1100 GGSGSCYKCGEAGHMARECPSG-GGGGRGGGSCYKCGEAGHMARECPSGG 1148



 Score = 97.1 bits (240), Expect = 1e-20
 Identities = 55/148 (37%), Positives = 68/148 (45%), Gaps = 22/148 (14%)
 Frame = -1

Query: 384  CYKCGETGHLTKDC--NGRYGGPSGCRKCGQVGHKARKCDQXXXXXXXXXXXXXGETGHI 211
            CYKCGE GH+ ++C   G  GG   C KCG+ GH AR+C               GE GH+
Sbjct: 977  CYKCGEAGHMARECPTGGSGGGGGNCYKCGEAGHMARECPSGGGGGGGGNCYKCGEAGHM 1036

Query: 210  AWECSQ----------CCSLCGKSGHMGKDCPE--------LSC-RCGENGHYPYECPKD 88
            A EC             C  CG++GHM ++CP          SC +CGE GH   ECP  
Sbjct: 1037 ARECPSGGGGGGGGGGNCYKCGEAGHMARECPSGGGGGGGGGSCYKCGEAGHMARECPSG 1096

Query: 87   RWSWNEDKVCCYICG-GEHMAKDCSGVG 7
                      CY CG   HMA++C   G
Sbjct: 1097 GGGGGSGS--CYKCGEAGHMARECPSGG 1122



 Score = 87.8 bits (216), Expect = 2e-17
 Identities = 50/147 (34%), Positives = 65/147 (44%), Gaps = 38/147 (25%)
 Frame = -1

Query: 420  CGENFHLAKDC-----------GCYKCGETGHLTKDC--NGRYGGPSGCRKCGQVGHKAR 280
            CGE  H+A++C            CYKCGE GH+ ++C   G  GG   C KCG+ GH AR
Sbjct: 1108 CGEAGHMARECPSGGGGGRGGGSCYKCGEAGHMARECPSGGGGGGGGSCYKCGEAGHMAR 1167

Query: 279  KCDQXXXXXXXXXXXXXG-ETGHIAWECSQC--------------CSLCGKSGHMGKDCP 145
            +C                 E GH+A EC                 C  CG++GHM ++CP
Sbjct: 1168 ECPSGGGGGGGGGSCYKCGEAGHMARECPSGGGRGGGGGRGGGGNCYKCGEAGHMARECP 1227

Query: 144  EL---------SC-RCGENGHYPYECP 94
                       +C +CGE GH   ECP
Sbjct: 1228 SSGGGGGGGGGNCYKCGEAGHMARECP 1254



 Score = 73.6 bits (179), Expect = 2e-12
 Identities = 49/142 (34%), Positives = 61/142 (42%), Gaps = 20/142 (14%)
 Frame = -1

Query: 372  GETGHLTKDCNGRYGGPSG-CRKCGQVGHKARKCDQXXXXXXXXXXXXXGETGHIAWECS 196
            GE     K  +G  GG  G C KCG+ GH AR+C               GE GH+A EC 
Sbjct: 957  GEDRSWKKPASGGSGGGGGNCYKCGEAGHMARECPTGGSGGGGGNCYKCGEAGHMARECP 1016

Query: 195  Q--------CCSLCGKSGHMGKDCPE---------LSC-RCGENGHYPYECPKDRWSWNE 70
                      C  CG++GHM ++CP           +C +CGE GH   ECP        
Sbjct: 1017 SGGGGGGGGNCYKCGEAGHMARECPSGGGGGGGGGGNCYKCGEAGHMARECPSGGGGGGG 1076

Query: 69   DKVCCYICG-GEHMAKDCSGVG 7
                CY CG   HMA++C   G
Sbjct: 1077 GG-SCYKCGEAGHMARECPSGG 1097



 Score = 70.5 bits (171), Expect = 3e-11
 Identities = 39/123 (31%), Positives = 52/123 (42%), Gaps = 19/123 (15%)
 Frame = -1

Query: 420  CGENFHLAKDC-----------GCYKCGETGHLTKDC--------NGRYGGPSGCRKCGQ 298
            CGE  H+A++C            CYKCGE GH+ ++C         G  GG   C KCG+
Sbjct: 1159 CGEAGHMARECPSGGGGGGGGGSCYKCGEAGHMARECPSGGGRGGGGGRGGGGNCYKCGE 1218

Query: 297  VGHKARKCDQXXXXXXXXXXXXXGETGHIAWECSQCCSLCGKSGHMGKDCPELSCRCGEN 118
             GH AR+C                 +G         C  CG++GHM ++CP      G  
Sbjct: 1219 AGHMAREC---------------PSSGGGGGGGGGNCYKCGEAGHMARECPSGGRYGGGG 1263

Query: 117  GHY 109
            G Y
Sbjct: 1264 GSY 1266


>ref|XP_021837791.1| protein RNA-directed DNA methylation 3 isoform X4 [Spinacia oleracea]
          Length = 1610

 Score =  103 bits (257), Expect = 7e-23
 Identities = 61/171 (35%), Positives = 77/171 (45%), Gaps = 33/171 (19%)
 Frame = -1

Query: 420  CGENFHLAKDC------------GCYKCGETGHLTKDC---NGRYGGPSGCRKCGQVGHK 286
            CGE  H+A++C             CYKCGE GH+ ++C    G  GG   C KCG+ GH 
Sbjct: 1030 CGEAGHMARECPSGGGGGGGGGGNCYKCGEAGHMARECPSGGGGGGGGGSCYKCGEAGHM 1089

Query: 285  ARKCDQXXXXXXXXXXXXXGETGHIAWECSQ---------CCSLCGKSGHMGKDCPE--- 142
            AR+C               GE GH+A EC            C  CG++GHM ++CP    
Sbjct: 1090 ARECPSGGGGGGSGSCYKCGEAGHMARECPSGGGGGRGGGSCYKCGEAGHMARECPSGGG 1149

Query: 141  ----LSC-RCGENGHYPYECPKDRWSWNEDKVCCYICG-GEHMAKDCSGVG 7
                 SC +CGE GH   ECP            CY CG   HMA++C   G
Sbjct: 1150 GGGGGSCYKCGEAGHMARECPSGGGGGGGGG-SCYKCGEAGHMARECPSGG 1199



 Score =  100 bits (248), Expect = 1e-21
 Identities = 61/170 (35%), Positives = 77/170 (45%), Gaps = 32/170 (18%)
 Frame = -1

Query: 420  CGENFHLAKDC----------GCYKCGETGHLTKDC--NGRYGGPSGCRKCGQVGHKARK 277
            CGE  H+A++C           CYKCGE GH+ ++C   G  GG   C KCG+ GH AR+
Sbjct: 980  CGEAGHMARECPTGGSGGGGGNCYKCGEAGHMARECPSGGGGGGGGNCYKCGEAGHMARE 1039

Query: 276  CDQ--XXXXXXXXXXXXXGETGHIAWECSQ---------CCSLCGKSGHMGKDCP----- 145
            C                 GE GH+A EC            C  CG++GHM ++CP     
Sbjct: 1040 CPSGGGGGGGGGGNCYKCGEAGHMARECPSGGGGGGGGGSCYKCGEAGHMARECPSGGGG 1099

Query: 144  --ELSC-RCGENGHYPYECPKDRWSWNEDKVCCYICG-GEHMAKDCSGVG 7
                SC +CGE GH   ECP            CY CG   HMA++C   G
Sbjct: 1100 GGSGSCYKCGEAGHMARECPSG-GGGGRGGGSCYKCGEAGHMARECPSGG 1148



 Score = 97.1 bits (240), Expect = 1e-20
 Identities = 55/148 (37%), Positives = 68/148 (45%), Gaps = 22/148 (14%)
 Frame = -1

Query: 384  CYKCGETGHLTKDC--NGRYGGPSGCRKCGQVGHKARKCDQXXXXXXXXXXXXXGETGHI 211
            CYKCGE GH+ ++C   G  GG   C KCG+ GH AR+C               GE GH+
Sbjct: 977  CYKCGEAGHMARECPTGGSGGGGGNCYKCGEAGHMARECPSGGGGGGGGNCYKCGEAGHM 1036

Query: 210  AWECSQ----------CCSLCGKSGHMGKDCPE--------LSC-RCGENGHYPYECPKD 88
            A EC             C  CG++GHM ++CP          SC +CGE GH   ECP  
Sbjct: 1037 ARECPSGGGGGGGGGGNCYKCGEAGHMARECPSGGGGGGGGGSCYKCGEAGHMARECPSG 1096

Query: 87   RWSWNEDKVCCYICG-GEHMAKDCSGVG 7
                      CY CG   HMA++C   G
Sbjct: 1097 GGGGGSGS--CYKCGEAGHMARECPSGG 1122



 Score = 87.8 bits (216), Expect = 2e-17
 Identities = 50/147 (34%), Positives = 65/147 (44%), Gaps = 38/147 (25%)
 Frame = -1

Query: 420  CGENFHLAKDC-----------GCYKCGETGHLTKDC--NGRYGGPSGCRKCGQVGHKAR 280
            CGE  H+A++C            CYKCGE GH+ ++C   G  GG   C KCG+ GH AR
Sbjct: 1108 CGEAGHMARECPSGGGGGRGGGSCYKCGEAGHMARECPSGGGGGGGGSCYKCGEAGHMAR 1167

Query: 279  KCDQXXXXXXXXXXXXXG-ETGHIAWECSQC--------------CSLCGKSGHMGKDCP 145
            +C                 E GH+A EC                 C  CG++GHM ++CP
Sbjct: 1168 ECPSGGGGGGGGGSCYKCGEAGHMARECPSGGGRGGGGGRGGGGNCYKCGEAGHMARECP 1227

Query: 144  EL---------SC-RCGENGHYPYECP 94
                       +C +CGE GH   ECP
Sbjct: 1228 SSGGGGGGGGGNCYKCGEAGHMARECP 1254



 Score = 73.6 bits (179), Expect = 2e-12
 Identities = 49/142 (34%), Positives = 61/142 (42%), Gaps = 20/142 (14%)
 Frame = -1

Query: 372  GETGHLTKDCNGRYGGPSG-CRKCGQVGHKARKCDQXXXXXXXXXXXXXGETGHIAWECS 196
            GE     K  +G  GG  G C KCG+ GH AR+C               GE GH+A EC 
Sbjct: 957  GEDRSWKKPASGGSGGGGGNCYKCGEAGHMARECPTGGSGGGGGNCYKCGEAGHMARECP 1016

Query: 195  Q--------CCSLCGKSGHMGKDCPE---------LSC-RCGENGHYPYECPKDRWSWNE 70
                      C  CG++GHM ++CP           +C +CGE GH   ECP        
Sbjct: 1017 SGGGGGGGGNCYKCGEAGHMARECPSGGGGGGGGGGNCYKCGEAGHMARECPSGGGGGGG 1076

Query: 69   DKVCCYICG-GEHMAKDCSGVG 7
                CY CG   HMA++C   G
Sbjct: 1077 GG-SCYKCGEAGHMARECPSGG 1097



 Score = 70.5 bits (171), Expect = 3e-11
 Identities = 39/123 (31%), Positives = 52/123 (42%), Gaps = 19/123 (15%)
 Frame = -1

Query: 420  CGENFHLAKDC-----------GCYKCGETGHLTKDC--------NGRYGGPSGCRKCGQ 298
            CGE  H+A++C            CYKCGE GH+ ++C         G  GG   C KCG+
Sbjct: 1159 CGEAGHMARECPSGGGGGGGGGSCYKCGEAGHMARECPSGGGRGGGGGRGGGGNCYKCGE 1218

Query: 297  VGHKARKCDQXXXXXXXXXXXXXGETGHIAWECSQCCSLCGKSGHMGKDCPELSCRCGEN 118
             GH AR+C                 +G         C  CG++GHM ++CP      G  
Sbjct: 1219 AGHMAREC---------------PSSGGGGGGGGGNCYKCGEAGHMARECPSGGRYGGGG 1263

Query: 117  GHY 109
            G Y
Sbjct: 1264 GSY 1266


>ref|XP_021837788.1| protein RNA-directed DNA methylation 3 isoform X2 [Spinacia oleracea]
 ref|XP_021837789.1| protein RNA-directed DNA methylation 3 isoform X2 [Spinacia oleracea]
          Length = 1635

 Score =  103 bits (257), Expect = 7e-23
 Identities = 61/171 (35%), Positives = 77/171 (45%), Gaps = 33/171 (19%)
 Frame = -1

Query: 420  CGENFHLAKDC------------GCYKCGETGHLTKDC---NGRYGGPSGCRKCGQVGHK 286
            CGE  H+A++C             CYKCGE GH+ ++C    G  GG   C KCG+ GH 
Sbjct: 1055 CGEAGHMARECPSGGGGGGGGGGNCYKCGEAGHMARECPSGGGGGGGGGSCYKCGEAGHM 1114

Query: 285  ARKCDQXXXXXXXXXXXXXGETGHIAWECSQ---------CCSLCGKSGHMGKDCPE--- 142
            AR+C               GE GH+A EC            C  CG++GHM ++CP    
Sbjct: 1115 ARECPSGGGGGGSGSCYKCGEAGHMARECPSGGGGGRGGGSCYKCGEAGHMARECPSGGG 1174

Query: 141  ----LSC-RCGENGHYPYECPKDRWSWNEDKVCCYICG-GEHMAKDCSGVG 7
                 SC +CGE GH   ECP            CY CG   HMA++C   G
Sbjct: 1175 GGGGGSCYKCGEAGHMARECPSGGGGGGGGG-SCYKCGEAGHMARECPSGG 1224



 Score =  100 bits (248), Expect = 1e-21
 Identities = 61/170 (35%), Positives = 77/170 (45%), Gaps = 32/170 (18%)
 Frame = -1

Query: 420  CGENFHLAKDC----------GCYKCGETGHLTKDC--NGRYGGPSGCRKCGQVGHKARK 277
            CGE  H+A++C           CYKCGE GH+ ++C   G  GG   C KCG+ GH AR+
Sbjct: 1005 CGEAGHMARECPTGGSGGGGGNCYKCGEAGHMARECPSGGGGGGGGNCYKCGEAGHMARE 1064

Query: 276  CDQ--XXXXXXXXXXXXXGETGHIAWECSQ---------CCSLCGKSGHMGKDCP----- 145
            C                 GE GH+A EC            C  CG++GHM ++CP     
Sbjct: 1065 CPSGGGGGGGGGGNCYKCGEAGHMARECPSGGGGGGGGGSCYKCGEAGHMARECPSGGGG 1124

Query: 144  --ELSC-RCGENGHYPYECPKDRWSWNEDKVCCYICG-GEHMAKDCSGVG 7
                SC +CGE GH   ECP            CY CG   HMA++C   G
Sbjct: 1125 GGSGSCYKCGEAGHMARECPSG-GGGGRGGGSCYKCGEAGHMARECPSGG 1173



 Score = 97.1 bits (240), Expect = 1e-20
 Identities = 55/148 (37%), Positives = 68/148 (45%), Gaps = 22/148 (14%)
 Frame = -1

Query: 384  CYKCGETGHLTKDC--NGRYGGPSGCRKCGQVGHKARKCDQXXXXXXXXXXXXXGETGHI 211
            CYKCGE GH+ ++C   G  GG   C KCG+ GH AR+C               GE GH+
Sbjct: 1002 CYKCGEAGHMARECPTGGSGGGGGNCYKCGEAGHMARECPSGGGGGGGGNCYKCGEAGHM 1061

Query: 210  AWECSQ----------CCSLCGKSGHMGKDCPE--------LSC-RCGENGHYPYECPKD 88
            A EC             C  CG++GHM ++CP          SC +CGE GH   ECP  
Sbjct: 1062 ARECPSGGGGGGGGGGNCYKCGEAGHMARECPSGGGGGGGGGSCYKCGEAGHMARECPSG 1121

Query: 87   RWSWNEDKVCCYICG-GEHMAKDCSGVG 7
                      CY CG   HMA++C   G
Sbjct: 1122 GGGGGSGS--CYKCGEAGHMARECPSGG 1147



 Score = 87.8 bits (216), Expect = 2e-17
 Identities = 50/147 (34%), Positives = 65/147 (44%), Gaps = 38/147 (25%)
 Frame = -1

Query: 420  CGENFHLAKDC-----------GCYKCGETGHLTKDC--NGRYGGPSGCRKCGQVGHKAR 280
            CGE  H+A++C            CYKCGE GH+ ++C   G  GG   C KCG+ GH AR
Sbjct: 1133 CGEAGHMARECPSGGGGGRGGGSCYKCGEAGHMARECPSGGGGGGGGSCYKCGEAGHMAR 1192

Query: 279  KCDQXXXXXXXXXXXXXG-ETGHIAWECSQC--------------CSLCGKSGHMGKDCP 145
            +C                 E GH+A EC                 C  CG++GHM ++CP
Sbjct: 1193 ECPSGGGGGGGGGSCYKCGEAGHMARECPSGGGRGGGGGRGGGGNCYKCGEAGHMARECP 1252

Query: 144  EL---------SC-RCGENGHYPYECP 94
                       +C +CGE GH   ECP
Sbjct: 1253 SSGGGGGGGGGNCYKCGEAGHMARECP 1279



 Score = 73.6 bits (179), Expect = 2e-12
 Identities = 49/142 (34%), Positives = 61/142 (42%), Gaps = 20/142 (14%)
 Frame = -1

Query: 372  GETGHLTKDCNGRYGGPSG-CRKCGQVGHKARKCDQXXXXXXXXXXXXXGETGHIAWECS 196
            GE     K  +G  GG  G C KCG+ GH AR+C               GE GH+A EC 
Sbjct: 982  GEDRSWKKPASGGSGGGGGNCYKCGEAGHMARECPTGGSGGGGGNCYKCGEAGHMARECP 1041

Query: 195  Q--------CCSLCGKSGHMGKDCPE---------LSC-RCGENGHYPYECPKDRWSWNE 70
                      C  CG++GHM ++CP           +C +CGE GH   ECP        
Sbjct: 1042 SGGGGGGGGNCYKCGEAGHMARECPSGGGGGGGGGGNCYKCGEAGHMARECPSGGGGGGG 1101

Query: 69   DKVCCYICG-GEHMAKDCSGVG 7
                CY CG   HMA++C   G
Sbjct: 1102 GG-SCYKCGEAGHMARECPSGG 1122



 Score = 70.5 bits (171), Expect = 3e-11
 Identities = 39/123 (31%), Positives = 52/123 (42%), Gaps = 19/123 (15%)
 Frame = -1

Query: 420  CGENFHLAKDC-----------GCYKCGETGHLTKDC--------NGRYGGPSGCRKCGQ 298
            CGE  H+A++C            CYKCGE GH+ ++C         G  GG   C KCG+
Sbjct: 1184 CGEAGHMARECPSGGGGGGGGGSCYKCGEAGHMARECPSGGGRGGGGGRGGGGNCYKCGE 1243

Query: 297  VGHKARKCDQXXXXXXXXXXXXXGETGHIAWECSQCCSLCGKSGHMGKDCPELSCRCGEN 118
             GH AR+C                 +G         C  CG++GHM ++CP      G  
Sbjct: 1244 AGHMAREC---------------PSSGGGGGGGGGNCYKCGEAGHMARECPSGGRYGGGG 1288

Query: 117  GHY 109
            G Y
Sbjct: 1289 GSY 1291


>ref|XP_019102664.1| PREDICTED: protein RNA-directed DNA methylation 3 isoform X3 [Beta
            vulgaris subsp. vulgaris]
          Length = 1436

 Score =  103 bits (256), Expect = 9e-23
 Identities = 61/170 (35%), Positives = 80/170 (47%), Gaps = 32/170 (18%)
 Frame = -1

Query: 420  CGENFHLAKDC----------GCYKCGETGHLTKDC--NGRYGGPSGCRKCGQVGHKARK 277
            CGE+ H+A++C           CYKCGE GH+ ++C   G  GG   C KCG+ GH AR+
Sbjct: 1028 CGESGHMARECPSGGSSGGGGNCYKCGEFGHMARECPSGGSSGGGGNCYKCGESGHMARE 1087

Query: 276  CDQ--XXXXXXXXXXXXXGETGHIAWECSQ--------CCSLCGKSGHMGKDCPE----- 142
            C                 GE+GH+A EC           C  CG+SGHM ++CP      
Sbjct: 1088 CPSGGGGGGGGGGKCYKCGESGHMARECPSGGGGGGGGKCFKCGESGHMARECPSGGGGG 1147

Query: 141  ----LSCRCGENGHYPYECPKDRWSWNEDKVCCYICGG-EHMAKDCSGVG 7
                   +CGE+GH   ECP         K  CY CG   HMA++C+  G
Sbjct: 1148 GGGGKCYKCGESGHMARECPSGGSGGGGGK--CYKCGELGHMARECTSGG 1195



 Score = 97.4 bits (241), Expect = 1e-20
 Identities = 54/147 (36%), Positives = 69/147 (46%), Gaps = 21/147 (14%)
 Frame = -1

Query: 384  CYKCGETGHLTKDC--NGRYGGPSGCRKCGQVGHKARKCDQXXXXXXXXXXXXXGETGHI 211
            CYKCGE+GH+ ++C   G  GG   C KCG+ GH AR+C               GE+GH+
Sbjct: 1025 CYKCGESGHMARECPSGGSSGGGGNCYKCGEFGHMARECPSGGSSGGGGNCYKCGESGHM 1084

Query: 210  AWECSQ----------CCSLCGKSGHMGKDCPE--------LSCRCGENGHYPYECPKDR 85
            A EC             C  CG+SGHM ++CP            +CGE+GH   ECP   
Sbjct: 1085 ARECPSGGGGGGGGGGKCYKCGESGHMARECPSGGGGGGGGKCFKCGESGHMARECPSGG 1144

Query: 84   WSWNEDKVCCYICG-GEHMAKDCSGVG 7
                     CY CG   HMA++C   G
Sbjct: 1145 GGGGGGGK-CYKCGESGHMARECPSGG 1170



 Score = 73.6 bits (179), Expect = 2e-12
 Identities = 46/130 (35%), Positives = 57/130 (43%), Gaps = 19/130 (14%)
 Frame = -1

Query: 339  GRYGGPSGCRKCGQVGHKARKCDQXXXXXXXXXXXXXGETGHIAWECSQ--------CCS 184
            GR GG   C KCG+ GH AR+C               GE GH+A EC           C 
Sbjct: 1018 GRSGG-GNCYKCGESGHMARECPSGGSSGGGGNCYKCGEFGHMARECPSGGSSGGGGNCY 1076

Query: 183  LCGKSGHMGKDCPE----------LSCRCGENGHYPYECPKDRWSWNEDKVCCYICG-GE 37
             CG+SGHM ++CP              +CGE+GH   ECP         K  C+ CG   
Sbjct: 1077 KCGESGHMARECPSGGGGGGGGGGKCYKCGESGHMARECPSGGGGGGGGK--CFKCGESG 1134

Query: 36   HMAKDCSGVG 7
            HMA++C   G
Sbjct: 1135 HMARECPSGG 1144


>ref|XP_011377814.1| zinc finger CCHC domain-containing protein 13 [Pteropus vampyrus]
          Length = 171

 Score = 97.1 bits (240), Expect = 1e-22
 Identities = 55/143 (38%), Positives = 68/143 (47%), Gaps = 8/143 (5%)
 Frame = -1

Query: 420 CGENFHLAKDCG-----CYKCGETGHLTKDC-NGRYGGPSGCRKCGQVGHKARKCDQXXX 259
           CGE+ H AK+C      CY CG TGH+ KDC   +      C  CG+ GH AR CD    
Sbjct: 51  CGESGHHAKNCDLPENICYNCGGTGHIAKDCAEPKRERDQCCYTCGRTGHLARDCD---- 106

Query: 258 XXXXXXXXXXGETGHIAWECSQCCSLCGKSGHMGKDCPELSC-RCGENGHYPYECPKDRW 82
                             +  Q C  CGK GH+ KDC ++ C RCGE GH    CPK   
Sbjct: 107 -----------------LQDEQKCYTCGKHGHIQKDCTQVKCYRCGEMGHVAINCPK--- 146

Query: 81  SWNEDKVCCYICGGE-HMAKDCS 16
                +V CY CG   H+A++CS
Sbjct: 147 ---TSEVNCYRCGASGHLARECS 166



 Score = 67.8 bits (164), Expect = 2e-11
 Identities = 44/154 (28%), Positives = 60/154 (38%), Gaps = 26/154 (16%)
 Frame = -1

Query: 384 CYKCGETGHLTKDC-----NGRYGGPSG-------------CRKCGQVGHKARKCDQXXX 259
           C++CG  GH  + C      GR     G             C +CG+ GH A+ CD    
Sbjct: 7   CFRCGRFGHWARVCPQGAARGRRARARGRDSQSTSNTLPDICYRCGESGHHAKNCDLPEN 66

Query: 258 XXXXXXXXXXGETGHIAWECS-------QCCSLCGKSGHMGKDCPELSCRCGENGHYPYE 100
                       TGHIA +C+       QCC  CG++GH+ +DC                
Sbjct: 67  ICYNCGG-----TGHIAKDCAEPKRERDQCCYTCGRTGHLARDCDL-------------- 107

Query: 99  CPKDRWSWNEDKVCCYICGGE-HMAKDCSGVGCY 1
                    +D+  CY CG   H+ KDC+ V CY
Sbjct: 108 ---------QDEQKCYTCGKHGHIQKDCTQVKCY 132


>ref|XP_018505692.1| PREDICTED: protein RNA-directed DNA methylation 3-like isoform X6
            [Pyrus x bretschneideri]
          Length = 1477

 Score =  102 bits (255), Expect = 1e-22
 Identities = 57/148 (38%), Positives = 77/148 (52%), Gaps = 20/148 (13%)
 Frame = -1

Query: 384  CYKCGETGHLTKDCNGRYGGPSG--CRKCGQVGHKARKCDQXXXXXXXXXXXXXGETGHI 211
            C+KCGE+GH++++C    GG  G  C KCG+ GH +R+C Q             GE+GH+
Sbjct: 1298 CFKCGESGHMSRECPQGGGGGKGGACFKCGESGHMSRECPQGGGGGKGGACFKCGESGHM 1357

Query: 210  AWECSQ--------CCSLCGKSGHMGKDCPE--------LSCRCGENGHYPYECPKDRWS 79
            + EC Q         C  CG+SGHM ++CP+           +CGE+GH   ECP+    
Sbjct: 1358 SRECPQGGGGGKGGACFKCGESGHMSRECPQGGGGGKGGACFKCGESGHMSRECPQGGGG 1417

Query: 78   WNEDKVCCYICG-GEHMAKDCS-GVGCY 1
                   CY CG   HMA+DCS G G Y
Sbjct: 1418 GGGG--ACYKCGESGHMARDCSQGGGSY 1443



 Score = 99.4 bits (246), Expect = 2e-21
 Identities = 56/177 (31%), Positives = 84/177 (47%), Gaps = 39/177 (22%)
 Frame = -1

Query: 420  CGENFHLAKDC----------GCYKCGETGHLTKDCNGRYGGPSG--CRKCGQVGHKARK 277
            CGE+ H++++C           C+KCGE+GH++++C    GG  G  C KCG+ GH +R+
Sbjct: 1301 CGESGHMSRECPQGGGGGKGGACFKCGESGHMSRECPQGGGGGKGGACFKCGESGHMSRE 1360

Query: 276  CDQXXXXXXXXXXXXXGETGHIAWECSQ--------CCSLCGKSGHMGKDCPE------- 142
            C Q             GE+GH++ EC Q         C  CG+SGHM ++CP+       
Sbjct: 1361 CPQGGGGGKGGACFKCGESGHMSRECPQGGGGGKGGACFKCGESGHMSRECPQGGGGGGG 1420

Query: 141  -LSCRCGENGHYPYECPKDRWSWNED----------KVCCYICG-GEHMAKDCSGVG 7
                +CGE+GH   +C +   S+                CY CG   H A++C   G
Sbjct: 1421 GACYKCGESGHMARDCSQGGGSYGGGGHSGGGGGGASGGCYKCGQSGHFARECPNSG 1477


>ref|XP_018505691.1| PREDICTED: protein RNA-directed DNA methylation 3-like isoform X5
            [Pyrus x bretschneideri]
          Length = 1484

 Score =  102 bits (255), Expect = 1e-22
 Identities = 57/148 (38%), Positives = 77/148 (52%), Gaps = 20/148 (13%)
 Frame = -1

Query: 384  CYKCGETGHLTKDCNGRYGGPSG--CRKCGQVGHKARKCDQXXXXXXXXXXXXXGETGHI 211
            C+KCGE+GH++++C    GG  G  C KCG+ GH +R+C Q             GE+GH+
Sbjct: 1305 CFKCGESGHMSRECPQGGGGGKGGACFKCGESGHMSRECPQGGGGGKGGACFKCGESGHM 1364

Query: 210  AWECSQ--------CCSLCGKSGHMGKDCPE--------LSCRCGENGHYPYECPKDRWS 79
            + EC Q         C  CG+SGHM ++CP+           +CGE+GH   ECP+    
Sbjct: 1365 SRECPQGGGGGKGGACFKCGESGHMSRECPQGGGGGKGGACFKCGESGHMSRECPQGGGG 1424

Query: 78   WNEDKVCCYICG-GEHMAKDCS-GVGCY 1
                   CY CG   HMA+DCS G G Y
Sbjct: 1425 GGGG--ACYKCGESGHMARDCSQGGGSY 1450



 Score = 99.4 bits (246), Expect = 2e-21
 Identities = 56/177 (31%), Positives = 84/177 (47%), Gaps = 39/177 (22%)
 Frame = -1

Query: 420  CGENFHLAKDC----------GCYKCGETGHLTKDCNGRYGGPSG--CRKCGQVGHKARK 277
            CGE+ H++++C           C+KCGE+GH++++C    GG  G  C KCG+ GH +R+
Sbjct: 1308 CGESGHMSRECPQGGGGGKGGACFKCGESGHMSRECPQGGGGGKGGACFKCGESGHMSRE 1367

Query: 276  CDQXXXXXXXXXXXXXGETGHIAWECSQ--------CCSLCGKSGHMGKDCPE------- 142
            C Q             GE+GH++ EC Q         C  CG+SGHM ++CP+       
Sbjct: 1368 CPQGGGGGKGGACFKCGESGHMSRECPQGGGGGKGGACFKCGESGHMSRECPQGGGGGGG 1427

Query: 141  -LSCRCGENGHYPYECPKDRWSWNED----------KVCCYICG-GEHMAKDCSGVG 7
                +CGE+GH   +C +   S+                CY CG   H A++C   G
Sbjct: 1428 GACYKCGESGHMARDCSQGGGSYGGGGHSGGGGGGASGGCYKCGQSGHFARECPNSG 1484


>ref|XP_018505690.1| PREDICTED: protein RNA-directed DNA methylation 3-like isoform X4
            [Pyrus x bretschneideri]
          Length = 1488

 Score =  102 bits (255), Expect = 1e-22
 Identities = 57/148 (38%), Positives = 77/148 (52%), Gaps = 20/148 (13%)
 Frame = -1

Query: 384  CYKCGETGHLTKDCNGRYGGPSG--CRKCGQVGHKARKCDQXXXXXXXXXXXXXGETGHI 211
            C+KCGE+GH++++C    GG  G  C KCG+ GH +R+C Q             GE+GH+
Sbjct: 1309 CFKCGESGHMSRECPQGGGGGKGGACFKCGESGHMSRECPQGGGGGKGGACFKCGESGHM 1368

Query: 210  AWECSQ--------CCSLCGKSGHMGKDCPE--------LSCRCGENGHYPYECPKDRWS 79
            + EC Q         C  CG+SGHM ++CP+           +CGE+GH   ECP+    
Sbjct: 1369 SRECPQGGGGGKGGACFKCGESGHMSRECPQGGGGGKGGACFKCGESGHMSRECPQGGGG 1428

Query: 78   WNEDKVCCYICG-GEHMAKDCS-GVGCY 1
                   CY CG   HMA+DCS G G Y
Sbjct: 1429 GGGG--ACYKCGESGHMARDCSQGGGSY 1454



 Score = 99.4 bits (246), Expect = 2e-21
 Identities = 56/177 (31%), Positives = 84/177 (47%), Gaps = 39/177 (22%)
 Frame = -1

Query: 420  CGENFHLAKDC----------GCYKCGETGHLTKDCNGRYGGPSG--CRKCGQVGHKARK 277
            CGE+ H++++C           C+KCGE+GH++++C    GG  G  C KCG+ GH +R+
Sbjct: 1312 CGESGHMSRECPQGGGGGKGGACFKCGESGHMSRECPQGGGGGKGGACFKCGESGHMSRE 1371

Query: 276  CDQXXXXXXXXXXXXXGETGHIAWECSQ--------CCSLCGKSGHMGKDCPE------- 142
            C Q             GE+GH++ EC Q         C  CG+SGHM ++CP+       
Sbjct: 1372 CPQGGGGGKGGACFKCGESGHMSRECPQGGGGGKGGACFKCGESGHMSRECPQGGGGGGG 1431

Query: 141  -LSCRCGENGHYPYECPKDRWSWNED----------KVCCYICG-GEHMAKDCSGVG 7
                +CGE+GH   +C +   S+                CY CG   H A++C   G
Sbjct: 1432 GACYKCGESGHMARDCSQGGGSYGGGGHSGGGGGGASGGCYKCGQSGHFARECPNSG 1488


>ref|XP_018505689.1| PREDICTED: protein RNA-directed DNA methylation 3-like isoform X3
            [Pyrus x bretschneideri]
          Length = 1488

 Score =  102 bits (255), Expect = 1e-22
 Identities = 57/148 (38%), Positives = 77/148 (52%), Gaps = 20/148 (13%)
 Frame = -1

Query: 384  CYKCGETGHLTKDCNGRYGGPSG--CRKCGQVGHKARKCDQXXXXXXXXXXXXXGETGHI 211
            C+KCGE+GH++++C    GG  G  C KCG+ GH +R+C Q             GE+GH+
Sbjct: 1309 CFKCGESGHMSRECPQGGGGGKGGACFKCGESGHMSRECPQGGGGGKGGACFKCGESGHM 1368

Query: 210  AWECSQ--------CCSLCGKSGHMGKDCPE--------LSCRCGENGHYPYECPKDRWS 79
            + EC Q         C  CG+SGHM ++CP+           +CGE+GH   ECP+    
Sbjct: 1369 SRECPQGGGGGKGGACFKCGESGHMSRECPQGGGGGKGGACFKCGESGHMSRECPQGGGG 1428

Query: 78   WNEDKVCCYICG-GEHMAKDCS-GVGCY 1
                   CY CG   HMA+DCS G G Y
Sbjct: 1429 GGGG--ACYKCGESGHMARDCSQGGGSY 1454



 Score = 99.4 bits (246), Expect = 2e-21
 Identities = 56/177 (31%), Positives = 84/177 (47%), Gaps = 39/177 (22%)
 Frame = -1

Query: 420  CGENFHLAKDC----------GCYKCGETGHLTKDCNGRYGGPSG--CRKCGQVGHKARK 277
            CGE+ H++++C           C+KCGE+GH++++C    GG  G  C KCG+ GH +R+
Sbjct: 1312 CGESGHMSRECPQGGGGGKGGACFKCGESGHMSRECPQGGGGGKGGACFKCGESGHMSRE 1371

Query: 276  CDQXXXXXXXXXXXXXGETGHIAWECSQ--------CCSLCGKSGHMGKDCPE------- 142
            C Q             GE+GH++ EC Q         C  CG+SGHM ++CP+       
Sbjct: 1372 CPQGGGGGKGGACFKCGESGHMSRECPQGGGGGKGGACFKCGESGHMSRECPQGGGGGGG 1431

Query: 141  -LSCRCGENGHYPYECPKDRWSWNED----------KVCCYICG-GEHMAKDCSGVG 7
                +CGE+GH   +C +   S+                CY CG   H A++C   G
Sbjct: 1432 GACYKCGESGHMARDCSQGGGSYGGGGHSGGGGGGASGGCYKCGQSGHFARECPNSG 1488


>ref|XP_009368938.1| PREDICTED: protein RNA-directed DNA methylation 3-like isoform X1
            [Pyrus x bretschneideri]
 ref|XP_009368940.1| PREDICTED: protein RNA-directed DNA methylation 3-like isoform X2
            [Pyrus x bretschneideri]
 ref|XP_018505688.1| PREDICTED: protein RNA-directed DNA methylation 3-like isoform X1
            [Pyrus x bretschneideri]
          Length = 1498

 Score =  102 bits (255), Expect = 1e-22
 Identities = 57/148 (38%), Positives = 77/148 (52%), Gaps = 20/148 (13%)
 Frame = -1

Query: 384  CYKCGETGHLTKDCNGRYGGPSG--CRKCGQVGHKARKCDQXXXXXXXXXXXXXGETGHI 211
            C+KCGE+GH++++C    GG  G  C KCG+ GH +R+C Q             GE+GH+
Sbjct: 1319 CFKCGESGHMSRECPQGGGGGKGGACFKCGESGHMSRECPQGGGGGKGGACFKCGESGHM 1378

Query: 210  AWECSQ--------CCSLCGKSGHMGKDCPE--------LSCRCGENGHYPYECPKDRWS 79
            + EC Q         C  CG+SGHM ++CP+           +CGE+GH   ECP+    
Sbjct: 1379 SRECPQGGGGGKGGACFKCGESGHMSRECPQGGGGGKGGACFKCGESGHMSRECPQGGGG 1438

Query: 78   WNEDKVCCYICG-GEHMAKDCS-GVGCY 1
                   CY CG   HMA+DCS G G Y
Sbjct: 1439 GGGG--ACYKCGESGHMARDCSQGGGSY 1464



 Score = 99.4 bits (246), Expect = 2e-21
 Identities = 56/177 (31%), Positives = 84/177 (47%), Gaps = 39/177 (22%)
 Frame = -1

Query: 420  CGENFHLAKDC----------GCYKCGETGHLTKDCNGRYGGPSG--CRKCGQVGHKARK 277
            CGE+ H++++C           C+KCGE+GH++++C    GG  G  C KCG+ GH +R+
Sbjct: 1322 CGESGHMSRECPQGGGGGKGGACFKCGESGHMSRECPQGGGGGKGGACFKCGESGHMSRE 1381

Query: 276  CDQXXXXXXXXXXXXXGETGHIAWECSQ--------CCSLCGKSGHMGKDCPE------- 142
            C Q             GE+GH++ EC Q         C  CG+SGHM ++CP+       
Sbjct: 1382 CPQGGGGGKGGACFKCGESGHMSRECPQGGGGGKGGACFKCGESGHMSRECPQGGGGGGG 1441

Query: 141  -LSCRCGENGHYPYECPKDRWSWNED----------KVCCYICG-GEHMAKDCSGVG 7
                +CGE+GH   +C +   S+                CY CG   H A++C   G
Sbjct: 1442 GACYKCGESGHMARDCSQGGGSYGGGGHSGGGGGGASGGCYKCGQSGHFARECPNSG 1498


>ref|XP_002154581.1| PREDICTED: cellular nucleic acid-binding protein-like [Hydra
           vulgaris]
          Length = 209

 Score = 97.4 bits (241), Expect = 2e-22
 Identities = 58/170 (34%), Positives = 77/170 (45%), Gaps = 36/170 (21%)
 Frame = -1

Query: 420 CGENFHLAKDCG--------------CYKCGETGHLTKDCN-GRYGGPSG------CRKC 304
           CG   H A++C               CY+CGE GHL++DC+    GG SG      C  C
Sbjct: 7   CGNEGHYARNCTEPSSTETSQKSDKECYRCGEVGHLSRDCSKSSSGGGSGNFDSRTCYSC 66

Query: 303 GQVGHKARKCDQXXXXXXXXXXXXXGETGHIAWEC---SQCCSLCGKSGHMGKDCPE--- 142
           G+ GH +R C Q             G+ GH A +C    + C  CGK+GH+ KDCPE   
Sbjct: 67  GRSGHISRDCTQRGGRKGKQRCYRCGKDGHFARDCEGEEEMCYTCGKAGHIKKDCPESES 126

Query: 141 --------LSCRCGENGHYPYECPKDRWSWNEDKVCCYICGGE-HMAKDC 19
                   +   C + GH+  EC +   S  E  V CY C  + H A+DC
Sbjct: 127 FTSSTNEQVCYHCNKPGHFARECAEKDDSSRERDVTCYKCNEKGHFARDC 176



 Score = 60.8 bits (146), Expect = 2e-08
 Identities = 38/127 (29%), Positives = 54/127 (42%), Gaps = 26/127 (20%)
 Frame = -1

Query: 321 SGCRKCGQVGHKARKCDQ----XXXXXXXXXXXXXGETGHIAWEC-------------SQ 193
           S C KCG  GH AR C +                 GE GH++ +C             S+
Sbjct: 2   STCYKCGNEGHYARNCTEPSSTETSQKSDKECYRCGEVGHLSRDCSKSSSGGGSGNFDSR 61

Query: 192 CCSLCGKSGHMGKDCPELS--------CRCGENGHYPYECPKDRWSWNEDKVCCYICG-G 40
            C  CG+SGH+ +DC +           RCG++GH+  +C         ++  CY CG  
Sbjct: 62  TCYSCGRSGHISRDCTQRGGRKGKQRCYRCGKDGHFARDC-------EGEEEMCYTCGKA 114

Query: 39  EHMAKDC 19
            H+ KDC
Sbjct: 115 GHIKKDC 121



 Score = 58.5 bits (140), Expect = 1e-07
 Identities = 35/114 (30%), Positives = 46/114 (40%), Gaps = 21/114 (18%)
 Frame = -1

Query: 420 CGENFHLAKDCG-----CYKCGETGHLTKDCNGRYGGPSG-----CRKCGQVGHKARKCD 271
           CG++ H A+DC      CY CG+ GH+ KDC       S      C  C + GH AR+C 
Sbjct: 91  CGKDGHFARDCEGEEEMCYTCGKAGHIKKDCPESESFTSSTNEQVCYHCNKPGHFARECA 150

Query: 270 QXXXXXXXXXXXXXG--ETGHIAWEC---------SQCCSLCGKSGHMGKDCPE 142
           +                E GH A +C            C  C + GH  +DC E
Sbjct: 151 EKDDSSRERDVTCYKCNEKGHFARDCHNKSNDKKNGNTCFKCHQVGHFARDCTE 204