BLASTX nr result

ID: Chrysanthemum22_contig00030891 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum22_contig00030891
         (380 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_023740616.1| F-box protein At4g19940-like [Lactuca sativa...    56   1e-06
ref|XP_023740615.1| F-box protein At1g30790-like [Lactuca sativa...    55   4e-06

>ref|XP_023740616.1| F-box protein At4g19940-like [Lactuca sativa]
 gb|PLY68581.1| hypothetical protein LSAT_2X9961 [Lactuca sativa]
          Length = 394

 Score = 56.2 bits (134), Expect = 1e-06
 Identities = 28/66 (42%), Positives = 37/66 (56%)
 Frame = +3

Query: 3   GFKKNGEPIFEIRKADGEFTTLNVYDPCSQQIKNLGISGEEGSFFMGSYKEXXXXXXXXX 182
           GF K+GEP+ E++    E   L VY+P    I N+GISG  GSFF+GSY E         
Sbjct: 326 GFTKSGEPMMEVKDYYKEAAALVVYEPSLGYINNIGISGNYGSFFVGSYMETLLLLDQAD 385

Query: 183 XXIYSD 200
             +YS+
Sbjct: 386 CSVYSN 391


>ref|XP_023740615.1| F-box protein At1g30790-like [Lactuca sativa]
 gb|PLY68576.1| hypothetical protein LSAT_2X10041 [Lactuca sativa]
          Length = 391

 Score = 54.7 bits (130), Expect = 4e-06
 Identities = 28/68 (41%), Positives = 38/68 (55%)
 Frame = +3

Query: 3   GFKKNGEPIFEIRKADGEFTTLNVYDPCSQQIKNLGISGEEGSFFMGSYKEXXXXXXXXX 182
           GF K+G+PI  ++  D E   L VY+P S+ IK +GI G  G FF+GSY E         
Sbjct: 324 GFTKSGKPILGLKGRDEEPAALVVYEPRSEHIKEIGIYGRYGLFFVGSYVETLLLHEQVN 383

Query: 183 XXIYSDDN 206
             +YS +N
Sbjct: 384 YSVYSYNN 391


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