BLASTX nr result

ID: Chrysanthemum22_contig00030397 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum22_contig00030397
         (650 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_023736567.1| guanine nucleotide exchange factor SPIKE 1 i...    62   2e-07
ref|XP_023736568.1| guanine nucleotide exchange factor SPIKE 1 i...    59   2e-06

>ref|XP_023736567.1| guanine nucleotide exchange factor SPIKE 1 isoform X1 [Lactuca
           sativa]
          Length = 1836

 Score = 61.6 bits (148), Expect = 2e-07
 Identities = 28/32 (87%), Positives = 30/32 (93%)
 Frame = +3

Query: 555 LIKATENMSSNGHCFRRKPRQPVAANLNVDSL 650
           LI ATE MSSNGHCFRRKPRQPVAANL++DSL
Sbjct: 11  LIAATEKMSSNGHCFRRKPRQPVAANLDIDSL 42


>ref|XP_023736568.1| guanine nucleotide exchange factor SPIKE 1 isoform X2 [Lactuca
           sativa]
          Length = 1824

 Score = 58.9 bits (141), Expect = 2e-06
 Identities = 26/29 (89%), Positives = 28/29 (96%)
 Frame = +3

Query: 564 ATENMSSNGHCFRRKPRQPVAANLNVDSL 650
           ATE MSSNGHCFRRKPRQPVAANL++DSL
Sbjct: 2   ATEKMSSNGHCFRRKPRQPVAANLDIDSL 30


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