BLASTX nr result

ID: Chrysanthemum22_contig00030273 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum22_contig00030273
         (445 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KVH88006.1| Plant specific Rop nucleotide exchanger, PRONE [C...    78   6e-14
ref|XP_022011819.1| rop guanine nucleotide exchange factor 1-lik...    60   9e-08
ref|XP_022025808.1| rop guanine nucleotide exchange factor 1-lik...    56   3e-06

>gb|KVH88006.1| Plant specific Rop nucleotide exchanger, PRONE [Cynara cardunculus
           var. scolymus]
          Length = 541

 Score = 78.2 bits (191), Expect = 6e-14
 Identities = 42/65 (64%), Positives = 46/65 (70%), Gaps = 3/65 (4%)
 Frame = -1

Query: 445 SSPFATPTFCLSP-QNLTSGGALTPANN--EVTQSCKLDVKISADLDRPWTYAASKVPAN 275
           SSPFATPTFC SP QNL     +   N   E  QSCKLD  +SADLDRPWTYAA  +P+N
Sbjct: 480 SSPFATPTFCSSPMQNLIP---IKDDNRLMEAAQSCKLDGSMSADLDRPWTYAAGNLPSN 536

Query: 274 APERH 260
           APERH
Sbjct: 537 APERH 541


>ref|XP_022011819.1| rop guanine nucleotide exchange factor 1-like [Helianthus annuus]
 gb|OTF94961.1| putative rho guanyl-nucleotide exchange factor 1 [Helianthus
           annuus]
          Length = 565

 Score = 60.5 bits (145), Expect = 9e-08
 Identities = 35/61 (57%), Positives = 38/61 (62%)
 Frame = -1

Query: 445 SSPFATPTFCLSPQNLTSGGALTPANNEVTQSCKLDVKISADLDRPWTYAASKVPANAPE 266
           SSPF TPTFC SP  L   G +   N+     CK     +ADLD PWTYAA KVPANAPE
Sbjct: 517 SSPFRTPTFCSSPPVL---GPIKHVNH-----CK-----AADLDMPWTYAAGKVPANAPE 563

Query: 265 R 263
           R
Sbjct: 564 R 564


>ref|XP_022025808.1| rop guanine nucleotide exchange factor 1-like [Helianthus annuus]
 gb|OTF85797.1| putative PRONE domain-containing protein [Helianthus annuus]
          Length = 537

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 32/62 (51%), Positives = 33/62 (53%)
 Frame = -1

Query: 445 SSPFATPTFCLSPQNLTSGGALTPANNEVTQSCKLDVKISADLDRPWTYAASKVPANAPE 266
           SSPFATPT CLSP  L    +   A               ADL  PWTYAA KV ANAPE
Sbjct: 491 SSPFATPTRCLSPPGLIKNDSHFKA---------------ADLGMPWTYAAGKVSANAPE 535

Query: 265 RH 260
           RH
Sbjct: 536 RH 537


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