BLASTX nr result

ID: Chrysanthemum22_contig00030243 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum22_contig00030243
         (414 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_022034772.1| F-box protein SKP2A-like [Helianthus annuus]...    45   2e-06

>ref|XP_022034772.1| F-box protein SKP2A-like [Helianthus annuus]
 gb|OTG28301.1| putative F-box/RNI-like superfamily protein [Helianthus annuus]
          Length = 358

 Score = 45.1 bits (105), Expect(2) = 2e-06
 Identities = 17/23 (73%), Positives = 20/23 (86%)
 Frame = +3

Query: 345 VNYGWREGVGDMGIMILAYGCPD 413
           +N GW EGVGD+G+M LAYGCPD
Sbjct: 203 INLGWCEGVGDVGVMSLAYGCPD 225



 Score = 33.9 bits (76), Expect(2) = 2e-06
 Identities = 16/31 (51%), Positives = 20/31 (64%)
 Frame = +1

Query: 253 RLNYFKLCGYGKAKFHKALKAIGFYCSQLKS 345
           +L    LCG  KA   KALK+IG+ C QL+S
Sbjct: 172 KLKVLNLCGCVKAATDKALKSIGYNCRQLES 202


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