BLASTX nr result

ID: Chrysanthemum22_contig00030028 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum22_contig00030028
         (686 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|PLY99765.1| hypothetical protein LSAT_9X47141 [Lactuca sativa]      58   5e-06
ref|XP_023762723.1| crossover junction endonuclease MUS81 [Lactu...    58   5e-06

>gb|PLY99765.1| hypothetical protein LSAT_9X47141 [Lactuca sativa]
          Length = 635

 Score = 57.8 bits (138), Expect = 5e-06
 Identities = 26/35 (74%), Positives = 31/35 (88%)
 Frame = -2

Query: 301 RYMLTEQGKEAAHDCLARSGLADSTEGLATINKTS 197
           +YMLTEQGKEAA DC+ RSGL DST+ LAT++KTS
Sbjct: 183 KYMLTEQGKEAARDCMLRSGLVDSTDDLATLDKTS 217


>ref|XP_023762723.1| crossover junction endonuclease MUS81 [Lactuca sativa]
          Length = 637

 Score = 57.8 bits (138), Expect = 5e-06
 Identities = 26/35 (74%), Positives = 31/35 (88%)
 Frame = -2

Query: 301 RYMLTEQGKEAAHDCLARSGLADSTEGLATINKTS 197
           +YMLTEQGKEAA DC+ RSGL DST+ LAT++KTS
Sbjct: 183 KYMLTEQGKEAARDCMLRSGLVDSTDDLATLDKTS 217


Top