BLASTX nr result

ID: Chrysanthemum22_contig00029971 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum22_contig00029971
         (387 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|PLY63008.1| hypothetical protein LSAT_8X119500 [Lactuca sativa]     60   9e-08
ref|XP_023747995.1| glutamate--tRNA ligase, chloroplastic/mitoch...    60   9e-08
ref|XP_022006050.1| glutamate--tRNA ligase, chloroplastic/mitoch...    55   5e-06

>gb|PLY63008.1| hypothetical protein LSAT_8X119500 [Lactuca sativa]
          Length = 583

 Score = 59.7 bits (143), Expect = 9e-08
 Identities = 45/97 (46%), Positives = 50/97 (51%)
 Frame = +2

Query: 95  ATLAGIGMNISGGTRAAIPPHXXXXXXXXXXXXXXXQTHRRSNTLIRISRNVPKQSRTRK 274
           ATLAGIG  I  GTR  +P                 QT + SNT I IS  VPK++ +  
Sbjct: 2   ATLAGIG--IGCGTRVVVPE--VFPQSKFILRPSLLQTRKTSNTFISISL-VPKRTFSIS 56

Query: 275 CFXXXXXXXXXXXXXVRVRFAPSPTGNLHVGGARTAL 385
                          VRVRFAPSPTGNLHVGGARTAL
Sbjct: 57  A-SVSDDSNSFNDRQVRVRFAPSPTGNLHVGGARTAL 92


>ref|XP_023747995.1| glutamate--tRNA ligase, chloroplastic/mitochondrial [Lactuca
           sativa]
          Length = 586

 Score = 59.7 bits (143), Expect = 9e-08
 Identities = 45/97 (46%), Positives = 50/97 (51%)
 Frame = +2

Query: 95  ATLAGIGMNISGGTRAAIPPHXXXXXXXXXXXXXXXQTHRRSNTLIRISRNVPKQSRTRK 274
           ATLAGIG  I  GTR  +P                 QT + SNT I IS  VPK++ +  
Sbjct: 5   ATLAGIG--IGCGTRVVVPE--VFPQSKFILRPSLLQTRKTSNTFISISL-VPKRTFSIS 59

Query: 275 CFXXXXXXXXXXXXXVRVRFAPSPTGNLHVGGARTAL 385
                          VRVRFAPSPTGNLHVGGARTAL
Sbjct: 60  A-SVSDDSNSFNDRQVRVRFAPSPTGNLHVGGARTAL 95


>ref|XP_022006050.1| glutamate--tRNA ligase, chloroplastic/mitochondrial [Helianthus
           annuus]
 gb|OTF99309.1| putative glutamate tRNA synthetase [Helianthus annuus]
          Length = 581

 Score = 54.7 bits (130), Expect = 5e-06
 Identities = 42/97 (43%), Positives = 48/97 (49%)
 Frame = +2

Query: 95  ATLAGIGMNISGGTRAAIPPHXXXXXXXXXXXXXXXQTHRRSNTLIRISRNVPKQSRTRK 274
           ATLAGIG      TR  +P                 QT + +NT I IS  +PK+S +  
Sbjct: 5   ATLAGIGCR----TRITLPE----LFPQSRLVRPSLQTRKTTNTFISISY-IPKRSFSIS 55

Query: 275 CFXXXXXXXXXXXXXVRVRFAPSPTGNLHVGGARTAL 385
                          VRVRFAPSPTGNLHVGGARTAL
Sbjct: 56  A-SISDISNGVNDRQVRVRFAPSPTGNLHVGGARTAL 91


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