BLASTX nr result

ID: Chrysanthemum22_contig00029932 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum22_contig00029932
         (412 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KVI00384.1| Nucleotide-binding, alpha-beta plait [Cynara card...    63   7e-15

>gb|KVI00384.1| Nucleotide-binding, alpha-beta plait [Cynara cardunculus var.
           scolymus]
          Length = 922

 Score = 62.8 bits (151), Expect(2) = 7e-15
 Identities = 38/67 (56%), Positives = 44/67 (65%), Gaps = 1/67 (1%)
 Frame = +2

Query: 215 NGIVSKEHENNMAKDETYDTTMVDSVPENENLE-NSNQISSAIDQLELDESKPVDDIEME 391
           N I    HEN + KDET D    +SV EN+NLE NSNQISSAIDQ+EL++ K  DD   E
Sbjct: 791 NEINGDNHENKIVKDETSD----NSVLENQNLEENSNQISSAIDQMELNDLKSRDDFGTE 846

Query: 392 NNSLKPE 412
           N  LK E
Sbjct: 847 NKPLKLE 853



 Score = 45.1 bits (105), Expect(2) = 7e-15
 Identities = 28/66 (42%), Positives = 39/66 (59%), Gaps = 1/66 (1%)
 Frame = +3

Query: 12  TSSETINIIKQTTEQSNSMVDEAKDDRRIETGSL-SDSDKEQPEEVEEPADLDKCHSDKQ 188
           TSS+T+ +     E+  SM D   +D+  E GS  S SDK+Q  E++EPAD + CH DK 
Sbjct: 734 TSSDTVKV----AEEDCSMADIVTEDQSRERGSEPSGSDKDQ--EIKEPADGNDCHDDKP 787

Query: 189 DESTSI 206
           +E   I
Sbjct: 788 EEVNEI 793


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