BLASTX nr result

ID: Chrysanthemum22_contig00029753 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum22_contig00029753
         (757 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KVH99201.1| DNA-binding WRKY [Cynara cardunculus var. scolymus]     72   8e-11
gb|KVI02275.1| DNA-binding WRKY [Cynara cardunculus var. scolymus]     60   1e-06

>gb|KVH99201.1| DNA-binding WRKY [Cynara cardunculus var. scolymus]
          Length = 605

 Score = 72.4 bits (176), Expect = 8e-11
 Identities = 35/59 (59%), Positives = 49/59 (83%)
 Frame = +3

Query: 72  DIDGTLPQLNITNDKVDAHLHLKWRDTNIDTLDVTPLIKFIREPHLVVQTISGVNIVDD 248
           ++DGT+PQLNITND+V+ + +LK R T+  TLDVT ++K IREP +VVQTIS ++I+DD
Sbjct: 376 NMDGTVPQLNITNDEVEDNPNLKRRRTDFGTLDVTAVVKPIREPRVVVQTISEIDILDD 434


>gb|KVI02275.1| DNA-binding WRKY [Cynara cardunculus var. scolymus]
          Length = 558

 Score = 60.1 bits (144), Expect = 1e-06
 Identities = 33/59 (55%), Positives = 43/59 (72%), Gaps = 2/59 (3%)
 Frame = +3

Query: 78  DGTLPQLNITNDKVDAH--LHLKWRDTNIDTLDVTPLIKFIREPHLVVQTISGVNIVDD 248
           DG++ QLN TND+VD     +LK R T+   LDVTP++K IREP +VVQT S V+I+DD
Sbjct: 338 DGSVRQLNRTNDEVDDDDDPYLKKRRTDFSALDVTPVVKPIREPRVVVQTTSEVDILDD 396


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