BLASTX nr result

ID: Chrysanthemum22_contig00029743 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum22_contig00029743
         (527 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_023743436.1| putative coatomer subunit beta'-3 [Lactuca s...    54   3e-06
ref|XP_023742334.1| putative coatomer subunit beta'-3 [Lactuca s...    54   6e-06

>ref|XP_023743436.1| putative coatomer subunit beta'-3 [Lactuca sativa]
 ref|XP_023751134.1| putative coatomer subunit beta'-3 [Lactuca sativa]
 ref|XP_023734107.1| putative coatomer subunit beta'-3 [Lactuca sativa]
 ref|XP_023746331.1| putative coatomer subunit beta'-3 [Lactuca sativa]
 ref|XP_023752278.1| putative coatomer subunit beta'-3 [Lactuca sativa]
 ref|XP_023758506.1| putative coatomer subunit beta'-3 [Lactuca sativa]
 ref|XP_023762913.1| putative coatomer subunit beta'-3 [Lactuca sativa]
 ref|XP_023763349.1| putative coatomer subunit beta'-3 [Lactuca sativa]
 ref|XP_023765910.1| putative coatomer subunit beta'-3 [Lactuca sativa]
 ref|XP_023768801.1| putative coatomer subunit beta'-3 [Lactuca sativa]
 ref|XP_023771792.1| putative coatomer subunit beta'-3 [Lactuca sativa]
 ref|XP_023737347.1| putative coatomer subunit beta'-3 [Lactuca sativa]
 ref|XP_023739940.1| putative coatomer subunit beta'-3 [Lactuca sativa]
 ref|XP_023742949.1| putative coatomer subunit beta'-3 [Lactuca sativa]
          Length = 118

 Score = 53.9 bits (128), Expect = 3e-06
 Identities = 24/24 (100%), Positives = 24/24 (100%)
 Frame = +2

Query: 2  RLENTLNYGLERVWAVGYMKGSRR 73
          RLENTLNYGLERVWAVGYMKGSRR
Sbjct: 18 RLENTLNYGLERVWAVGYMKGSRR 41


>ref|XP_023742334.1| putative coatomer subunit beta'-3 [Lactuca sativa]
          Length = 151

 Score = 53.9 bits (128), Expect = 6e-06
 Identities = 24/24 (100%), Positives = 24/24 (100%)
 Frame = +2

Query: 2  RLENTLNYGLERVWAVGYMKGSRR 73
          RLENTLNYGLERVWAVGYMKGSRR
Sbjct: 18 RLENTLNYGLERVWAVGYMKGSRR 41


Top