BLASTX nr result

ID: Chrysanthemum22_contig00029717 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum22_contig00029717
         (437 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_023756241.1| uncharacterized protein LOC111904744 isoform...    56   2e-06
ref|XP_023756239.1| uncharacterized protein LOC111904744 isoform...    56   2e-06

>ref|XP_023756241.1| uncharacterized protein LOC111904744 isoform X2 [Lactuca sativa]
 gb|PLY91111.1| hypothetical protein LSAT_0X6020 [Lactuca sativa]
          Length = 339

 Score = 56.2 bits (134), Expect = 2e-06
 Identities = 25/40 (62%), Positives = 32/40 (80%)
 Frame = -1

Query: 134 MSEISRDVNAASMMNMGPDMFQYYISSLSELLYRDDFAPT 15
           MSEISRD+N +   N+GPD+FQYYI  +SELL  DDF+P+
Sbjct: 1   MSEISRDMNTSDDSNIGPDLFQYYIRGVSELLSGDDFSPS 40


>ref|XP_023756239.1| uncharacterized protein LOC111904744 isoform X1 [Lactuca sativa]
 ref|XP_023756240.1| uncharacterized protein LOC111904744 isoform X1 [Lactuca sativa]
          Length = 354

 Score = 56.2 bits (134), Expect = 2e-06
 Identities = 25/40 (62%), Positives = 32/40 (80%)
 Frame = -1

Query: 134 MSEISRDVNAASMMNMGPDMFQYYISSLSELLYRDDFAPT 15
           MSEISRD+N +   N+GPD+FQYYI  +SELL  DDF+P+
Sbjct: 1   MSEISRDMNTSDDSNIGPDLFQYYIRGVSELLSGDDFSPS 40


Top