BLASTX nr result

ID: Chrysanthemum22_contig00029593 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum22_contig00029593
         (409 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KVI07645.1| Mad3/BUB1 homology region 1 [Cynara cardunculus v...    42   5e-07

>gb|KVI07645.1| Mad3/BUB1 homology region 1 [Cynara cardunculus var. scolymus]
          Length = 373

 Score = 41.6 bits (96), Expect(2) = 5e-07
 Identities = 18/21 (85%), Positives = 21/21 (100%)
 Frame = -2

Query: 408 NAQPIEKLKSSYRSFFARSMN 346
           NAQPIEKLKS+Y+SFFAR+MN
Sbjct: 177 NAQPIEKLKSAYKSFFARTMN 197



 Score = 39.7 bits (91), Expect(2) = 5e-07
 Identities = 28/71 (39%), Positives = 35/71 (49%)
 Frame = -3

Query: 326 TQEKSGDTRQAVRSFGTILAWEDSGTFIYLLFGSQNCVFHYSTYFYFFNDNPGNRTQ*TL 147
           ++E+  DTRQ VRSFGTILA +DS                            GNRT  + 
Sbjct: 202 SEEELMDTRQPVRSFGTILARKDS----------------------------GNRTLESS 233

Query: 146 DISRKRLKQEG 114
           DI+RKR KQ+G
Sbjct: 234 DIARKRPKQDG 244


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