BLASTX nr result

ID: Chrysanthemum22_contig00029307 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum22_contig00029307
         (432 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_023731227.1| uncharacterized protein LOC111878993 isoform...    59   3e-07
ref|XP_023731226.1| uncharacterized protein LOC111878993 isoform...    57   2e-06
ref|XP_023731225.1| bromodomain and WD repeat-containing protein...    55   5e-06
gb|KVI01666.1| Bromodomain-containing protein [Cynara cardunculu...    55   5e-06

>ref|XP_023731227.1| uncharacterized protein LOC111878993 isoform X3 [Lactuca sativa]
 gb|PLY75849.1| hypothetical protein LSAT_9X120520 [Lactuca sativa]
          Length = 760

 Score = 58.9 bits (141), Expect = 3e-07
 Identities = 38/112 (33%), Positives = 55/112 (49%), Gaps = 2/112 (1%)
 Frame = +1

Query: 1   YWKAAGLHMEQTPVIAEPS--SSRHNNRQSDYPLSPPANKFTHLHQNVAGPSSSRHNNRQ 174
           YW AAGLH EQ+P   +P+   + HN   S  P++P A+K +   Q++  P SS+ N   
Sbjct: 254 YWIAAGLHCEQSPTFVKPAVQQNMHNEGHSVSPVTPIADKRSTQVQSI--PPSSKENRPG 311

Query: 175 RDYPLSPLATNFTQLHQNEAEPSSSRHNNRQNDHTSSPLASTQSRF*SSGTN 330
               +      FT  +   AE S SRH  +  D    PL +  S   +SG+N
Sbjct: 312 LSSNVQYHVPGFTNANSGVAESSISRHKKQGKDFPLVPLTNNLSNQNASGSN 363


>ref|XP_023731226.1| uncharacterized protein LOC111878993 isoform X2 [Lactuca sativa]
          Length = 761

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 39/113 (34%), Positives = 56/113 (49%), Gaps = 3/113 (2%)
 Frame = +1

Query: 1   YWKAAGLHMEQTPV-IAEPS--SSRHNNRQSDYPLSPPANKFTHLHQNVAGPSSSRHNNR 171
           YW AAGLH EQ+P  + EP+   + HN   S  P++P A+K +   Q++  P SS+ N  
Sbjct: 254 YWIAAGLHCEQSPTFVIEPAVQQNMHNEGHSVSPVTPIADKRSTQVQSI--PPSSKENRP 311

Query: 172 QRDYPLSPLATNFTQLHQNEAEPSSSRHNNRQNDHTSSPLASTQSRF*SSGTN 330
                +      FT  +   AE S SRH  +  D    PL +  S   +SG+N
Sbjct: 312 GLSSNVQYHVPGFTNANSGVAESSISRHKKQGKDFPLVPLTNNLSNQNASGSN 364


>ref|XP_023731225.1| bromodomain and WD repeat-containing protein 1-like isoform X1
           [Lactuca sativa]
          Length = 764

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 39/116 (33%), Positives = 56/116 (48%), Gaps = 6/116 (5%)
 Frame = +1

Query: 1   YWKAAGLHMEQTPV----IAEPS--SSRHNNRQSDYPLSPPANKFTHLHQNVAGPSSSRH 162
           YW AAGLH EQ+P     + EP+   + HN   S  P++P A+K +   Q++  P SS+ 
Sbjct: 254 YWIAAGLHCEQSPTFSKFLVEPAVQQNMHNEGHSVSPVTPIADKRSTQVQSI--PPSSKE 311

Query: 163 NNRQRDYPLSPLATNFTQLHQNEAEPSSSRHNNRQNDHTSSPLASTQSRF*SSGTN 330
           N       +      FT  +   AE S SRH  +  D    PL +  S   +SG+N
Sbjct: 312 NRPGLSSNVQYHVPGFTNANSGVAESSISRHKKQGKDFPLVPLTNNLSNQNASGSN 367


>gb|KVI01666.1| Bromodomain-containing protein [Cynara cardunculus var. scolymus]
          Length = 859

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 30/82 (36%), Positives = 42/82 (51%)
 Frame = +1

Query: 64  RHNNRQSDYPLSPPANKFTHLHQNVAGPSSSRHNNRQRDYPLSPLATNFTQLHQNEAEPS 243
           RHN R+ DYPL+P  + F HL QNV G +S    N++ +    P+     Q HQ+ + P 
Sbjct: 399 RHNKREKDYPLAPLEDNFAHLQQNVPGSNS----NQELENQPWPINMQAGQPHQSSSHPQ 454

Query: 244 SSRHNNRQNDHTSSPLASTQSR 309
           SS   N  N  T   L+  + R
Sbjct: 455 SSPQRNEPNTVTPDSLSIQKKR 476