BLASTX nr result

ID: Chrysanthemum22_contig00029061 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum22_contig00029061
         (453 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_022021874.1| chromatin structure-remodeling complex prote...    63   2e-08
gb|OTF86807.1| putative SNF2-related, N-terminal domain-containi...    63   2e-08
ref|XP_022021873.1| chromatin structure-remodeling complex prote...    63   2e-08
ref|XP_022021872.1| chromatin structure-remodeling complex prote...    63   2e-08

>ref|XP_022021874.1| chromatin structure-remodeling complex protein SYD isoform X3
            [Helianthus annuus]
          Length = 2637

 Score = 62.8 bits (151), Expect = 2e-08
 Identities = 47/114 (41%), Positives = 59/114 (51%), Gaps = 3/114 (2%)
 Frame = +2

Query: 119  STPPLVVS-QSTPTVISSSQSTPTVPAV--SQETSAPTLPVGSISLPVVSPTSADSQPAI 289
            +TP L  S QSTPTV++  QST T+     +   S+ TL V  +SLP++SPTS DSQ AI
Sbjct: 1573 TTPTLPASVQSTPTVLAGPQSTTTITTSIPTGTLSSATLTVTPVSLPMLSPTSTDSQSAI 1632

Query: 290  SPSAETTXXXXXXXXXXXXXXXXXXXXXXXEINESEADVPLADVPQPRGKKSHN 451
            SPSA T                         I ESE D P+   PQ RGKK ++
Sbjct: 1633 SPSAVT----PGRGRGRGRGRPRGRGRGRGHIVESEVDTPMP--PQRRGKKQNH 1680


>gb|OTF86807.1| putative SNF2-related, N-terminal domain-containing protein
            [Helianthus annuus]
          Length = 2681

 Score = 62.8 bits (151), Expect = 2e-08
 Identities = 47/114 (41%), Positives = 59/114 (51%), Gaps = 3/114 (2%)
 Frame = +2

Query: 119  STPPLVVS-QSTPTVISSSQSTPTVPAV--SQETSAPTLPVGSISLPVVSPTSADSQPAI 289
            +TP L  S QSTPTV++  QST T+     +   S+ TL V  +SLP++SPTS DSQ AI
Sbjct: 1564 TTPTLPASVQSTPTVLAGPQSTTTITTSIPTGTLSSATLTVTPVSLPMLSPTSTDSQSAI 1623

Query: 290  SPSAETTXXXXXXXXXXXXXXXXXXXXXXXEINESEADVPLADVPQPRGKKSHN 451
            SPSA T                         I ESE D P+   PQ RGKK ++
Sbjct: 1624 SPSAVT----PGRGRGRGRGRPRGRGRGRGHIVESEVDTPMP--PQRRGKKQNH 1671


>ref|XP_022021873.1| chromatin structure-remodeling complex protein SYD isoform X2
            [Helianthus annuus]
          Length = 2689

 Score = 62.8 bits (151), Expect = 2e-08
 Identities = 47/114 (41%), Positives = 59/114 (51%), Gaps = 3/114 (2%)
 Frame = +2

Query: 119  STPPLVVS-QSTPTVISSSQSTPTVPAV--SQETSAPTLPVGSISLPVVSPTSADSQPAI 289
            +TP L  S QSTPTV++  QST T+     +   S+ TL V  +SLP++SPTS DSQ AI
Sbjct: 1572 TTPTLPASVQSTPTVLAGPQSTTTITTSIPTGTLSSATLTVTPVSLPMLSPTSTDSQSAI 1631

Query: 290  SPSAETTXXXXXXXXXXXXXXXXXXXXXXXEINESEADVPLADVPQPRGKKSHN 451
            SPSA T                         I ESE D P+   PQ RGKK ++
Sbjct: 1632 SPSAVT----PGRGRGRGRGRPRGRGRGRGHIVESEVDTPMP--PQRRGKKQNH 1679


>ref|XP_022021872.1| chromatin structure-remodeling complex protein SYD isoform X1
            [Helianthus annuus]
          Length = 2690

 Score = 62.8 bits (151), Expect = 2e-08
 Identities = 47/114 (41%), Positives = 59/114 (51%), Gaps = 3/114 (2%)
 Frame = +2

Query: 119  STPPLVVS-QSTPTVISSSQSTPTVPAV--SQETSAPTLPVGSISLPVVSPTSADSQPAI 289
            +TP L  S QSTPTV++  QST T+     +   S+ TL V  +SLP++SPTS DSQ AI
Sbjct: 1573 TTPTLPASVQSTPTVLAGPQSTTTITTSIPTGTLSSATLTVTPVSLPMLSPTSTDSQSAI 1632

Query: 290  SPSAETTXXXXXXXXXXXXXXXXXXXXXXXEINESEADVPLADVPQPRGKKSHN 451
            SPSA T                         I ESE D P+   PQ RGKK ++
Sbjct: 1633 SPSAVT----PGRGRGRGRGRPRGRGRGRGHIVESEVDTPMP--PQRRGKKQNH 1680


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