BLASTX nr result

ID: Chrysanthemum22_contig00029012 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum22_contig00029012
         (1188 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KVI04979.1| Armadillo-type fold [Cynara cardunculus var. scol...   116   2e-24
ref|XP_023729499.1| uncharacterized protein DDB_G0283697-like [L...    91   1e-16
gb|PLY77194.1| hypothetical protein LSAT_8X21381 [Lactuca sativa]      91   8e-16
ref|XP_021997893.1| pre-mRNA-splicing factor CWC22 homolog [Heli...    85   5e-14
gb|OTG05147.1| putative MIF4G domain-containing protein / MA3 do...    85   5e-14
ref|XP_023762827.1| protein PIF-like [Lactuca sativa] >gi|134047...    82   9e-14
ref|XP_023756187.1| U1 small nuclear ribonucleoprotein 70 kDa-li...    59   2e-06

>gb|KVI04979.1| Armadillo-type fold [Cynara cardunculus var. scolymus]
          Length = 1041

 Score =  116 bits (290), Expect = 2e-24
 Identities = 60/107 (56%), Positives = 73/107 (68%), Gaps = 1/107 (0%)
 Frame = -3

Query: 715 SDRRKKEINEDSKRRGMSKXXXXXXXXXXDRRNMKKREDRKKSDALDLSDED-GEIKKTG 539
           +DRR K+++ED ++RG +K          DR N KK EDRK+SD  D S E+ GEI+K G
Sbjct: 272 NDRRNKQMDEDRRKRGKNKDIRSDEEDGNDRSNRKKSEDRKRSDEHDQSGEEVGEIRKAG 331

Query: 538 NKPVEKSDEEDGEFRRSGRKGKHEDTSDAEDGEFMRSGRKGKHEDKS 398
            K  E+SDEEDGE R+ GRKGKHE  SD EDGE  + GRKGKHED S
Sbjct: 332 KKHEERSDEEDGEIRKRGRKGKHEGRSDNEDGEIRKRGRKGKHEDMS 378



 Score = 72.0 bits (175), Expect = 9e-10
 Identities = 38/55 (69%), Positives = 43/55 (78%), Gaps = 4/55 (7%)
 Frame = -3

Query: 154 KDRRRNDVS----KRRDDQNGDKENVDEGPRFQKLAEMQEGMTNLGKSGGVYIPP 2
           +DRR +D      +RR D+N D + VDEGPRFQKLAEMQE MTNLGKSGGVYIPP
Sbjct: 413 RDRRSDDEDDSKDRRRRDRNKDAK-VDEGPRFQKLAEMQESMTNLGKSGGVYIPP 466


>ref|XP_023729499.1| uncharacterized protein DDB_G0283697-like [Lactuca sativa]
          Length = 311

 Score = 90.5 bits (223), Expect = 1e-16
 Identities = 50/102 (49%), Positives = 66/102 (64%), Gaps = 1/102 (0%)
 Frame = -3

Query: 715 SDRRKKEINEDSKRRGMSKXXXXXXXXXXDRRNMKKREDRKKSDALDLSDED-GEIKKTG 539
           ++RR KE NED ++RG SK          D+ N  K  D+K+SD  D SDE+ GEI+K  
Sbjct: 135 NNRRNKEKNEDMRKRGRSKDIRSDDEDGNDKNNRNKNVDKKRSDEHDQSDEEVGEIRK-- 192

Query: 538 NKPVEKSDEEDGEFRRSGRKGKHEDTSDAEDGEFMRSGRKGK 413
            K  ++SDEE GE R+SGR GK++D+SD E GE  + GRKGK
Sbjct: 193 -KNEDRSDEEYGEIRKSGRNGKYDDSSDKEGGEIRKRGRKGK 233


>gb|PLY77194.1| hypothetical protein LSAT_8X21381 [Lactuca sativa]
          Length = 762

 Score = 90.5 bits (223), Expect = 8e-16
 Identities = 50/102 (49%), Positives = 66/102 (64%), Gaps = 1/102 (0%)
 Frame = -3

Query: 715 SDRRKKEINEDSKRRGMSKXXXXXXXXXXDRRNMKKREDRKKSDALDLSDED-GEIKKTG 539
           ++RR KE NED ++RG SK          D+ N  K  D+K+SD  D SDE+ GEI+K  
Sbjct: 136 NNRRNKEKNEDMRKRGRSKDIRSDDEDGNDKNNRNKNVDKKRSDEHDQSDEEVGEIRK-- 193

Query: 538 NKPVEKSDEEDGEFRRSGRKGKHEDTSDAEDGEFMRSGRKGK 413
            K  ++SDEE GE R+SGR GK++D+SD E GE  + GRKGK
Sbjct: 194 -KNEDRSDEEYGEIRKSGRNGKYDDSSDKEGGEIRKRGRKGK 234



 Score = 82.8 bits (203), Expect = 3e-13
 Identities = 40/54 (74%), Positives = 45/54 (83%), Gaps = 2/54 (3%)
 Frame = -3

Query: 157 HKDRRR--NDVSKRRDDQNGDKENVDEGPRFQKLAEMQEGMTNLGKSGGVYIPP 2
           HK+RRR  NDV K + DQNGDKE  DEG RF+KLA++QE MTNLGKSGGVYIPP
Sbjct: 295 HKERRRTDNDVLKHKVDQNGDKEKPDEGARFKKLADLQESMTNLGKSGGVYIPP 348


>ref|XP_021997893.1| pre-mRNA-splicing factor CWC22 homolog [Helianthus annuus]
 ref|XP_021997894.1| pre-mRNA-splicing factor CWC22 homolog [Helianthus annuus]
          Length = 945

 Score = 85.1 bits (209), Expect = 5e-14
 Identities = 39/52 (75%), Positives = 48/52 (92%), Gaps = 1/52 (1%)
 Frame = -3

Query: 154 KDRRR-NDVSKRRDDQNGDKENVDEGPRFQKLAEMQEGMTNLGKSGGVYIPP 2
           +DRRR +DV+ +++D+NG+ ENVDEGPRFQKLAEMQE MTNLGK+GGVYIPP
Sbjct: 330 RDRRRGDDVANKKNDKNGETENVDEGPRFQKLAEMQENMTNLGKTGGVYIPP 381



 Score = 59.7 bits (143), Expect = 8e-06
 Identities = 38/99 (38%), Positives = 49/99 (49%), Gaps = 7/99 (7%)
 Frame = -3

Query: 688 EDSKRRGMSKXXXXXXXXXXDRRNMKKR------EDRKKSDALDLSDEDGEIKK-TGNKP 530
           +D  RRG S+           +RN  +R      ED     +   + EDG+ +K    K 
Sbjct: 88  DDETRRGRSRVLKGDDEYRDSKRNEDRRRRSRSVEDNGDGRSNMKTSEDGKRRKEVAKKH 147

Query: 529 VEKSDEEDGEFRRSGRKGKHEDTSDAEDGEFMRSGRKGK 413
            E SD EDGE R++  KGK ED SD EDGE  + G KGK
Sbjct: 148 EENSDGEDGEIRKTEIKGKREDISDDEDGEIRKRGTKGK 186


>gb|OTG05147.1| putative MIF4G domain-containing protein / MA3 domain-containing
           protein [Helianthus annuus]
          Length = 978

 Score = 85.1 bits (209), Expect = 5e-14
 Identities = 39/52 (75%), Positives = 48/52 (92%), Gaps = 1/52 (1%)
 Frame = -3

Query: 154 KDRRR-NDVSKRRDDQNGDKENVDEGPRFQKLAEMQEGMTNLGKSGGVYIPP 2
           +DRRR +DV+ +++D+NG+ ENVDEGPRFQKLAEMQE MTNLGK+GGVYIPP
Sbjct: 363 RDRRRGDDVANKKNDKNGETENVDEGPRFQKLAEMQENMTNLGKTGGVYIPP 414



 Score = 59.7 bits (143), Expect = 8e-06
 Identities = 38/99 (38%), Positives = 49/99 (49%), Gaps = 7/99 (7%)
 Frame = -3

Query: 688 EDSKRRGMSKXXXXXXXXXXDRRNMKKR------EDRKKSDALDLSDEDGEIKK-TGNKP 530
           +D  RRG S+           +RN  +R      ED     +   + EDG+ +K    K 
Sbjct: 151 DDETRRGRSRVLKGDDEYRDSKRNEDRRRRSRSVEDNGDGRSNMKTSEDGKRRKEVAKKH 210

Query: 529 VEKSDEEDGEFRRSGRKGKHEDTSDAEDGEFMRSGRKGK 413
            E SD EDGE R++  KGK ED SD EDGE  + G KGK
Sbjct: 211 EENSDGEDGEIRKTEIKGKREDISDDEDGEIRKRGTKGK 249


>ref|XP_023762827.1| protein PIF-like [Lactuca sativa]
 ref|XP_023762828.1| protein PIF-like [Lactuca sativa]
 ref|XP_023762830.1| protein PIF-like [Lactuca sativa]
 ref|XP_023762831.1| protein PIF-like [Lactuca sativa]
 ref|XP_023762832.1| protein PIF-like [Lactuca sativa]
 ref|XP_023762833.1| protein PIF-like [Lactuca sativa]
          Length = 297

 Score = 82.0 bits (201), Expect = 9e-14
 Identities = 49/102 (48%), Positives = 62/102 (60%), Gaps = 1/102 (0%)
 Frame = -3

Query: 715 SDRRKKEINEDSKRRGMSKXXXXXXXXXXDRRNMKKREDRKKSDALDLSDED-GEIKKTG 539
           +DRR KE NED ++RG +K          D+ N  K    K+ D  D SDE+ GE +KTG
Sbjct: 140 NDRRNKERNEDRRKRGRTKDVRSDDEDGHDKNNRNK----KRIDEHDQSDEEVGEFRKTG 195

Query: 538 NKPVEKSDEEDGEFRRSGRKGKHEDTSDAEDGEFMRSGRKGK 413
            K  + SDEEDGE R+SGRKGK++   D E GE  + GRKGK
Sbjct: 196 KKNEDISDEEDGEIRKSGRKGKYD---DKEIGEIRKRGRKGK 234



 Score = 73.2 bits (178), Expect = 9e-11
 Identities = 45/111 (40%), Positives = 65/111 (58%), Gaps = 7/111 (6%)
 Frame = -3

Query: 712 DRRKKEINEDSKRRGMSKXXXXXXXXXXDRRNMKKREDRKK---SDALDLSDEDGEIKKT 542
           D+ + E +++ +RRG              RRN ++ EDR+K   +  +   DEDG  K  
Sbjct: 117 DKGRDEEDDNDRRRGRKDDDEDGND----RRNKERNEDRRKRGRTKDVRSDDEDGHDKNN 172

Query: 541 GNKPV----EKSDEEDGEFRRSGRKGKHEDTSDAEDGEFMRSGRKGKHEDK 401
            NK      ++SDEE GEFR++G+K  +ED SD EDGE  +SGRKGK++DK
Sbjct: 173 RNKKRIDEHDQSDEEVGEFRKTGKK--NEDISDEEDGEIRKSGRKGKYDDK 221


>ref|XP_023756187.1| U1 small nuclear ribonucleoprotein 70 kDa-like [Lactuca sativa]
          Length = 216

 Score = 58.9 bits (141), Expect = 2e-06
 Identities = 45/112 (40%), Positives = 58/112 (51%), Gaps = 11/112 (9%)
 Frame = -3

Query: 709 RRKKEINEDSKRRGMSKXXXXXXXXXXDRRNMKKREDRKKSDALDLSDED-GEIKKTGNK 533
           RR KE     ++RG SK          D+ N  K    K+ D  D SDE+ GEI+KTG K
Sbjct: 94  RRNKE-----RKRGRSKDIRSDYEDGHDKNNRNK----KRIDEHDQSDEEVGEIRKTGKK 144

Query: 532 PVEKSDEEDGEFRRS----------GRKGKHEDTSDAEDGEFMRSGRKGKHE 407
             + SDEEDGE R+S          GRKGK +  SD ED ++ R   + K+E
Sbjct: 145 NEDISDEEDGEMRKSDKEIGEIRKRGRKGK-DKRSDDEDDKYKRRRNRNKYE 195


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