BLASTX nr result

ID: Chrysanthemum22_contig00028956 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum22_contig00028956
         (663 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KVI09493.1| 3'-5' exonuclease domain-containing protein [Cyna...    63   9e-08
ref|XP_017247501.1| PREDICTED: protein RRP6-like 1 [Daucus carot...    58   4e-06
gb|KZM99156.1| hypothetical protein DCAR_013482 [Daucus carota s...    58   4e-06
ref|XP_022005926.1| protein RRP6-like 2 [Helianthus annuus] >gi|...    57   8e-06
ref|XP_021973362.1| protein RRP6-like 2 [Helianthus annuus] >gi|...    57   8e-06

>gb|KVI09493.1| 3'-5' exonuclease domain-containing protein [Cynara cardunculus
           var. scolymus]
          Length = 777

 Score = 62.8 bits (151), Expect = 9e-08
 Identities = 37/55 (67%), Positives = 40/55 (72%), Gaps = 5/55 (9%)
 Frame = +3

Query: 435 GAKRGYAWSR--FGILYGCNMT---LASKVLKLERNSLEYLLRYYCEVAANKDLE 584
           GA R   W +  FGI Y CNM     ASKVLKLERNSLEYLLRYYCEVAANK+ +
Sbjct: 356 GADRDIIWLQRDFGI-YVCNMFDTGQASKVLKLERNSLEYLLRYYCEVAANKEYQ 409


>ref|XP_017247501.1| PREDICTED: protein RRP6-like 1 [Daucus carota subsp. sativus]
          Length = 932

 Score = 57.8 bits (138), Expect = 4e-06
 Identities = 34/55 (61%), Positives = 39/55 (70%), Gaps = 5/55 (9%)
 Frame = +3

Query: 435 GAKRGYAWSR--FGILYGCNMT---LASKVLKLERNSLEYLLRYYCEVAANKDLE 584
           GA R   W +  FGI Y CNM     AS+VLKLERNSLEYLL +YCEVAANK+ +
Sbjct: 296 GADRDIMWLQRDFGI-YVCNMFDTGQASRVLKLERNSLEYLLNHYCEVAANKEYQ 349


>gb|KZM99156.1| hypothetical protein DCAR_013482 [Daucus carota subsp. sativus]
          Length = 940

 Score = 57.8 bits (138), Expect = 4e-06
 Identities = 34/55 (61%), Positives = 39/55 (70%), Gaps = 5/55 (9%)
 Frame = +3

Query: 435 GAKRGYAWSR--FGILYGCNMT---LASKVLKLERNSLEYLLRYYCEVAANKDLE 584
           GA R   W +  FGI Y CNM     AS+VLKLERNSLEYLL +YCEVAANK+ +
Sbjct: 296 GADRDIMWLQRDFGI-YVCNMFDTGQASRVLKLERNSLEYLLNHYCEVAANKEYQ 349


>ref|XP_022005926.1| protein RRP6-like 2 [Helianthus annuus]
 gb|OTF99167.1| putative ribonuclease D, Exosome-associated factor Rrp6 [Helianthus
           annuus]
          Length = 874

 Score = 57.0 bits (136), Expect = 8e-06
 Identities = 33/55 (60%), Positives = 40/55 (72%), Gaps = 5/55 (9%)
 Frame = +3

Query: 435 GAKRGYAWSR--FGILYGCNMT---LASKVLKLERNSLEYLLRYYCEVAANKDLE 584
           GA R   W +  FGI Y CNM     ASKVLKLERNSLEYLL+++C+VAANK+ +
Sbjct: 338 GADRDIIWLQRDFGI-YVCNMFDTGQASKVLKLERNSLEYLLKHFCDVAANKEYQ 391


>ref|XP_021973362.1| protein RRP6-like 2 [Helianthus annuus]
 gb|OTG20808.1| hypothetical protein HannXRQ_Chr07g0197171 [Helianthus annuus]
          Length = 887

 Score = 57.0 bits (136), Expect = 8e-06
 Identities = 34/55 (61%), Positives = 39/55 (70%), Gaps = 5/55 (9%)
 Frame = +3

Query: 435 GAKRGYAWSR--FGILYGCNMT---LASKVLKLERNSLEYLLRYYCEVAANKDLE 584
           GA R   W +  FGI Y CNM     ASKVLKLERNSLE+LLRY+C VAANK+ +
Sbjct: 343 GADRDIIWLQRDFGI-YVCNMFDTGQASKVLKLERNSLEFLLRYFCGVAANKEYQ 396


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