BLASTX nr result

ID: Chrysanthemum22_contig00028841 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum22_contig00028841
         (551 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|PLY79518.1| hypothetical protein LSAT_1X29100 [Lactuca sativa]      57   4e-06
ref|XP_023771518.1| DNA polymerase I A, chloroplastic/mitochondr...    57   5e-06
gb|KVH99126.1| 3'-5' exonuclease domain-containing protein [Cyna...    56   9e-06

>gb|PLY79518.1| hypothetical protein LSAT_1X29100 [Lactuca sativa]
          Length = 1076

 Score = 57.0 bits (136), Expect = 4e-06
 Identities = 25/29 (86%), Positives = 28/29 (96%)
 Frame = -1

Query: 89  EQVADIDVKKETPVDHGEVICFSIYSGHE 3
           ++VA IDVK+ETPVDHGEVICFSIYSGHE
Sbjct: 321 DKVAAIDVKQETPVDHGEVICFSIYSGHE 349


>ref|XP_023771518.1| DNA polymerase I A, chloroplastic/mitochondrial-like [Lactuca
           sativa]
          Length = 1107

 Score = 56.6 bits (135), Expect = 5e-06
 Identities = 25/28 (89%), Positives = 27/28 (96%)
 Frame = -1

Query: 86  QVADIDVKKETPVDHGEVICFSIYSGHE 3
           +VA IDVK+ETPVDHGEVICFSIYSGHE
Sbjct: 353 EVAAIDVKQETPVDHGEVICFSIYSGHE 380


>gb|KVH99126.1| 3'-5' exonuclease domain-containing protein [Cynara cardunculus
           var. scolymus]
          Length = 992

 Score = 55.8 bits (133), Expect = 9e-06
 Identities = 25/27 (92%), Positives = 26/27 (96%)
 Frame = -1

Query: 83  VADIDVKKETPVDHGEVICFSIYSGHE 3
           VA IDVK+ETPVDHGEVICFSIYSGHE
Sbjct: 341 VAAIDVKQETPVDHGEVICFSIYSGHE 367


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