BLASTX nr result

ID: Chrysanthemum22_contig00028738 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum22_contig00028738
         (939 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KVH96243.1| hypothetical protein Ccrd_001672 [Cynara carduncu...   146   2e-35
ref|XP_022011711.1| interaptin-like [Helianthus annuus] >gi|1191...    67   1e-08

>gb|KVH96243.1| hypothetical protein Ccrd_001672 [Cynara cardunculus var. scolymus]
          Length = 998

 Score =  146 bits (368), Expect = 2e-35
 Identities = 102/245 (41%), Positives = 130/245 (53%), Gaps = 10/245 (4%)
 Frame = +2

Query: 233 IQAARRWGRPSKTDKVGEESQIDKDQVDVRVVKAKTTKLEEHAQVTEDQNEVMGMEIEQG 412
           IQ  + +   ++ D+ G+E   +K Q      + K   + E A   EDQ EV+   I+Q 
Sbjct: 10  IQDGQLYDIMARIDQEGQEDGAEKQQ---NQPQKKNNMVVETAFSVEDQTEVI---IDQK 63

Query: 413 VIRGGAEKXXXXXXXXXXAVVGTWLSVEDQTDVSEEENLPCEQLTVG--EKYRLQKHYNV 586
           V  G               +VG   S   +  V EEENLPCEQ  VG  E+Y+ Q   + 
Sbjct: 64  V-GGEWNGNGNGNGKEKGEIVGLRRSGRMKIVVDEEENLPCEQYKVGANEQYQPQNQCSF 122

Query: 587 RWIGRLEYIHRKGECVKQRGSGSRQHARNEQRQPCEQFVERTKEQDHQRKQCNVIWIGRR 766
            WI R E+I  KG CVKQR SGS+QH   E  QPCEQ  E  KE+ HQRKQ NV+WIGR 
Sbjct: 123 TWISRGEHIQGKGGCVKQRRSGSKQHVSEEPFQPCEQLEEGIKEKGHQRKQYNVVWIGRG 182

Query: 767 VRKLKEAARDPFEEQSDDDVTGTEDDLN--------DAEVDELVEQSQQKIETEETNAEH 922
           VRKL+ A +  +  +SD++V   ED +         DAEVDE VEQ + K E    N EH
Sbjct: 183 VRKLEGAGK--YLPESDEEVIELEDYVGEDAVMINCDAEVDEHVEQLKLKEEKGAINMEH 240

Query: 923 NRTEE 937
           NR EE
Sbjct: 241 NRPEE 245


>ref|XP_022011711.1| interaptin-like [Helianthus annuus]
 gb|OTF94873.1| putative winged helix-turn-helix DNA-binding domain-containing
           protein [Helianthus annuus]
          Length = 821

 Score = 67.4 bits (163), Expect = 1e-08
 Identities = 39/83 (46%), Positives = 49/83 (59%), Gaps = 1/83 (1%)
 Frame = +2

Query: 674 EQRQPCEQFVERTKEQDHQRKQCNVIWIGRRVRKLKEAARDPFEEQSDDDVTGTEDDLND 853
           E+  PC   V+  KEQ   +K+ NV WIGRR RKL+E   D   E  DD VT  E D+ D
Sbjct: 291 EENPPC---VQNNKEQSRPQKKYNVTWIGRRARKLQEDEIDFLNELFDDKVTELEADVGD 347

Query: 854 AEVDELVEQSQQK-IETEETNAE 919
           A+VDE VEQ ++K  E +  N E
Sbjct: 348 AKVDEHVEQPERKEAEIDTLNVE 370


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