BLASTX nr result

ID: Chrysanthemum22_contig00028709 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum22_contig00028709
         (455 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KVH92656.1| Bromodomain transcription factor [Cynara carduncu...    87   2e-17
ref|XP_023770801.1| transcription initiation factor TFIID subuni...    62   3e-08

>gb|KVH92656.1| Bromodomain transcription factor [Cynara cardunculus var. scolymus]
          Length = 374

 Score = 87.4 bits (215), Expect = 2e-17
 Identities = 42/60 (70%), Positives = 47/60 (78%)
 Frame = -1

Query: 455 FHIGKKSLNSTFRHNGKGKEKVAFWFSNDEVRDDEEKRMDKHPSVPMDIEEHTANDSVVN 276
           FHIGKKSL+   RHN KGKE+VA WF ND+V D +EKR +K P  PMDIEEHT NDSVVN
Sbjct: 315 FHIGKKSLDIANRHNYKGKEEVASWFVNDDVGDAKEKRTEKLPREPMDIEEHTGNDSVVN 374


>ref|XP_023770801.1| transcription initiation factor TFIID subunit 8-like [Lactuca
           sativa]
 gb|PLY80073.1| hypothetical protein LSAT_4X172000 [Lactuca sativa]
          Length = 361

 Score = 61.6 bits (148), Expect = 3e-08
 Identities = 32/61 (52%), Positives = 38/61 (62%), Gaps = 1/61 (1%)
 Frame = -1

Query: 455 FHIGKKSLNSTFR-HNGKGKEKVAFWFSNDEVRDDEEKRMDKHPSVPMDIEEHTANDSVV 279
           FHI KK L++T   HN KGK +V  WF NDE      +++ K    PMDIEEH  NDSVV
Sbjct: 301 FHIPKKPLDTTDTPHNEKGKAEVVSWFVNDEKEKITTEKLVKEQQQPMDIEEHNGNDSVV 360

Query: 278 N 276
           N
Sbjct: 361 N 361


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