BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum22_contig00028614
         (1493 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KVI09374.1| Protein of unknown function DUF408 [Cynara cardun...   394   e-127
gb|PLY85338.1| hypothetical protein LSAT_9X78801 [Lactuca sativa]     362   e-115
ref|XP_023764010.1| putative RNA polymerase II subunit B1 CTD ph...   362   e-115
ref|XP_023764011.1| putative RNA polymerase II subunit B1 CTD ph...   336   e-105
emb|CAN62034.1| hypothetical protein VITISV_014731 [Vitis vinifera]   334   e-104
ref|XP_018851159.1| PREDICTED: putative RNA polymerase II subuni...   326   e-101
ref|XP_002280625.1| PREDICTED: putative RNA polymerase II subuni...   325   e-100
ref|XP_023891791.1| putative RNA polymerase II subunit B1 CTD ph...   318   8e-98
gb|POE61564.1| putative rna polymerase ii subunit b1 ctd phospha...   318   1e-97
dbj|GAV89229.1| RPAP2_Rtr1 domain-containing protein [Cephalotus...   312   7e-96
ref|XP_017983793.1| PREDICTED: putative RNA polymerase II subuni...   308   1e-93
ref|XP_016471494.1| PREDICTED: putative RNA polymerase II subuni...   306   4e-93
ref|XP_009771014.1| PREDICTED: putative RNA polymerase II subuni...   305   9e-93
ref|XP_021278276.1| putative RNA polymerase II subunit B1 CTD ph...   305   1e-92
gb|EOY34545.1| F2P16.20 protein, putative isoform 1 [Theobroma c...   306   1e-92
ref|XP_004230345.1| PREDICTED: putative RNA polymerase II subuni...   300   5e-91
gb|OVA13023.1| Protein of unknown function DUF408 [Macleaya cord...   300   7e-91
ref|XP_016666333.1| PREDICTED: putative RNA polymerase II subuni...   298   8e-90
ref|XP_012479689.1| PREDICTED: putative RNA polymerase II subuni...   296   3e-89
ref|XP_017611362.1| PREDICTED: putative RNA polymerase II subuni...   296   3e-89

>gb|KVI09374.1| Protein of unknown function DUF408 [Cynara cardunculus var. scolymus]
          Length = 657

 Score =  394 bits (1011), Expect = e-127
 Identities = 225/429 (52%), Positives = 261/429 (60%), Gaps = 51/429 (11%)
 Frame = +1

Query: 259  GSKFKDSKLKKEENKIFNEMDFMSTIIMHDDGYSVSKQPSEPASKSPGTTSENSRKKMNR 438
            GSK KDSK K+EE  IF+EM+FMSTII  D+GYS+SK+PS    K+ G  S++SRKKMN 
Sbjct: 201  GSKLKDSKHKREEKSIFDEMNFMSTIITQDNGYSISKEPSGQTKKTAGAMSKDSRKKMNH 260

Query: 439  KKTNDKSVLSADSAGNALNVPETKLKKINNEGSDTFANHEASGVDADVTEREKAPVC--D 612
            K T+D    SADS+ NA NVPET L K++   S    N     VD +VTE  KA +C  +
Sbjct: 261  KGTDDGLTASADSSCNAQNVPETNLNKLSYVPSSACQN----VVDVNVTESVKARICGKE 316

Query: 613  HQPXXXXXXXXXXXXXXXXXXXXXXWADEKKD-------------DNAK--XXXXXXXXX 747
             QP                      WADEK D             +N K           
Sbjct: 317  AQPSSSGLKSSLKSSGALRTNHSVTWADEKTDGAHNRTLCEFNGIENEKETSKGFGMIDK 376

Query: 748  XXXXVDDDDHAFRLXXXXXXXXXXXXXXXXXXSGEFDAPDAVTEAGLVILPPPHDDNKVV 927
                 DDDD+  R                   SGE D  DAV+EAGL+ILPPP DDN++ 
Sbjct: 377  SIDDDDDDDNVLRFASAEACAVALSQAADAVASGESDVCDAVSEAGLLILPPPLDDNEIT 436

Query: 928  SE----GTVDPEPAPVKWPQKTGIVEADFLDSEDSWFDSPPEEFVVD------------- 1056
            SE       DPEPA +KWP +TGIVE+DF DS DSWFDSPPEEFVVD             
Sbjct: 437  SEEIEGAATDPEPARLKWPIRTGIVESDFFDSGDSWFDSPPEEFVVDVSTSPTWFFIFIA 496

Query: 1057 -----------------LSPFGTMFMSLFAWVSSSTLAYVYGRDDSFHEDYASVNGREYP 1185
                             LSPF TMFMSLFAW+SSSTLAY+YGRDDSFHE+YAS+NGREYP
Sbjct: 497  ILNVQEGFSDAHFHNFQLSPFATMFMSLFAWISSSTLAYLYGRDDSFHEEYASINGREYP 556

Query: 1186 RKIVLTDGRSSEIKQTLAGCLSRALPGLLRDLRVPTPVSTIEFGLGSLIETMSFLDALPG 1365
            RKIVLTDGRSSEIKQTLAGCLSRALPGL+ DLR+ TPVSTIE+G+G L++TMSFLD LP 
Sbjct: 557  RKIVLTDGRSSEIKQTLAGCLSRALPGLVHDLRLRTPVSTIEYGMGCLLDTMSFLDPLPS 616

Query: 1366 LRMKQWKVF 1392
            LRMKQW+VF
Sbjct: 617  LRMKQWQVF 625


>gb|PLY85338.1| hypothetical protein LSAT_9X78801 [Lactuca sativa]
          Length = 583

 Score =  362 bits (928), Expect = e-115
 Identities = 209/412 (50%), Positives = 248/412 (60%), Gaps = 2/412 (0%)
 Frame = +1

Query: 262  SKFKDSKLKKEENKIFNEMDFMSTIIMHDDGYSVSKQPSEPASKSPGTTSENSRKKMNRK 441
            SK K  + K+EE  IF EMDFMSTII  DDGYS+SK            TS NSRKKM+  
Sbjct: 182  SKNKPGRPKREEESIFGEMDFMSTIITQDDGYSISKGKGAETK-----TSSNSRKKMSHN 236

Query: 442  KTNDK-SVLSADSAGNALNVPETKLKKINNEGSDTFANHEASGVDADVTEREKAPVCDHQ 618
               DK    S+ S+ ++ NV + K+   N+E S+                  KA +   +
Sbjct: 237  NNKDKMKTSSSSSSSSSCNVQKKKVTTSNDEESEN---------------GNKAKIGSSE 281

Query: 619  PXXXXXXXXXXXXXXXXXXXXXXWADEKKDDNAKXXXXXXXXXXXXXVDDDDHAFRLXXX 798
            P                      WAD++                     D +H FR+   
Sbjct: 282  PSCSVGGLKSSLKSSSRTNRSVSWADDQT-----------LCEYSGNDPDPEHTFRVASA 330

Query: 799  XXXXXXXXXXXXXXXSGEFDAPDAVTEAGLVILPPPHDDNKVVSEGTVDPEPAPVKWPQK 978
                           SGE DAPDAV+EAG+VILPPP D  +       + EP  +KWP+K
Sbjct: 331  EACAAALSQAAEAVASGESDAPDAVSEAGIVILPPPGDGAEA------EAEPTRLKWPKK 384

Query: 979  TGIVEADFLDS-EDSWFDSPPEEFVVDLSPFGTMFMSLFAWVSSSTLAYVYGRDDSFHED 1155
            TGI E+D  DS EDSWFD+PPEEFV+DLSPF  MFMSLFAWVSSSTLAYVYG DDS    
Sbjct: 385  TGITESDVFDSFEDSWFDAPPEEFVLDLSPFARMFMSLFAWVSSSTLAYVYGGDDSC--- 441

Query: 1156 YASVNGREYPRKIVLTDGRSSEIKQTLAGCLSRALPGLLRDLRVPTPVSTIEFGLGSLIE 1335
            YA VNGREYPR +VL DGRS+EIK TLAGCLSRALPGL+R LR+PTPVSTIE  +G L++
Sbjct: 442  YAWVNGREYPRIVVLADGRSAEIKTTLAGCLSRALPGLVRHLRLPTPVSTIESMMGCLLD 501

Query: 1336 TMSFLDALPGLRMKQWKVFVLLFIEGLSVCRIPAIAPHLTNKRSFFQKVFDD 1491
            TMSF+DALP LRMKQW+VFVLLF++ LSV RIPA+ PHL NKR FFQKVFDD
Sbjct: 502  TMSFIDALPPLRMKQWQVFVLLFVDALSVSRIPAMTPHLANKRRFFQKVFDD 553


>ref|XP_023764010.1| putative RNA polymerase II subunit B1 CTD phosphatase RPAP2 homolog
            isoform X1 [Lactuca sativa]
          Length = 595

 Score =  362 bits (928), Expect = e-115
 Identities = 209/412 (50%), Positives = 248/412 (60%), Gaps = 2/412 (0%)
 Frame = +1

Query: 262  SKFKDSKLKKEENKIFNEMDFMSTIIMHDDGYSVSKQPSEPASKSPGTTSENSRKKMNRK 441
            SK K  + K+EE  IF EMDFMSTII  DDGYS+SK            TS NSRKKM+  
Sbjct: 194  SKNKPGRPKREEESIFGEMDFMSTIITQDDGYSISKGKGAETK-----TSSNSRKKMSHN 248

Query: 442  KTNDK-SVLSADSAGNALNVPETKLKKINNEGSDTFANHEASGVDADVTEREKAPVCDHQ 618
               DK    S+ S+ ++ NV + K+   N+E S+                  KA +   +
Sbjct: 249  NNKDKMKTSSSSSSSSSCNVQKKKVTTSNDEESEN---------------GNKAKIGSSE 293

Query: 619  PXXXXXXXXXXXXXXXXXXXXXXWADEKKDDNAKXXXXXXXXXXXXXVDDDDHAFRLXXX 798
            P                      WAD++                     D +H FR+   
Sbjct: 294  PSCSVGGLKSSLKSSSRTNRSVSWADDQT-----------LCEYSGNDPDPEHTFRVASA 342

Query: 799  XXXXXXXXXXXXXXXSGEFDAPDAVTEAGLVILPPPHDDNKVVSEGTVDPEPAPVKWPQK 978
                           SGE DAPDAV+EAG+VILPPP D  +       + EP  +KWP+K
Sbjct: 343  EACAAALSQAAEAVASGESDAPDAVSEAGIVILPPPGDGAEA------EAEPTRLKWPKK 396

Query: 979  TGIVEADFLDS-EDSWFDSPPEEFVVDLSPFGTMFMSLFAWVSSSTLAYVYGRDDSFHED 1155
            TGI E+D  DS EDSWFD+PPEEFV+DLSPF  MFMSLFAWVSSSTLAYVYG DDS    
Sbjct: 397  TGITESDVFDSFEDSWFDAPPEEFVLDLSPFARMFMSLFAWVSSSTLAYVYGGDDSC--- 453

Query: 1156 YASVNGREYPRKIVLTDGRSSEIKQTLAGCLSRALPGLLRDLRVPTPVSTIEFGLGSLIE 1335
            YA VNGREYPR +VL DGRS+EIK TLAGCLSRALPGL+R LR+PTPVSTIE  +G L++
Sbjct: 454  YAWVNGREYPRIVVLADGRSAEIKTTLAGCLSRALPGLVRHLRLPTPVSTIESMMGCLLD 513

Query: 1336 TMSFLDALPGLRMKQWKVFVLLFIEGLSVCRIPAIAPHLTNKRSFFQKVFDD 1491
            TMSF+DALP LRMKQW+VFVLLF++ LSV RIPA+ PHL NKR FFQKVFDD
Sbjct: 514  TMSFIDALPPLRMKQWQVFVLLFVDALSVSRIPAMTPHLANKRRFFQKVFDD 565


>ref|XP_023764011.1| putative RNA polymerase II subunit B1 CTD phosphatase RPAP2 homolog
            isoform X2 [Lactuca sativa]
          Length = 579

 Score =  336 bits (861), Expect = e-105
 Identities = 200/412 (48%), Positives = 235/412 (57%), Gaps = 2/412 (0%)
 Frame = +1

Query: 262  SKFKDSKLKKEENKIFNEMDFMSTIIMHDDGYSVSKQPSEPASKSPGTTSENSRKKMNRK 441
            SK K  + K+EE  IF EMDFMSTII  DDGYS+SK            TS NSRKKM+  
Sbjct: 194  SKNKPGRPKREEESIFGEMDFMSTIITQDDGYSISKGKGAETK-----TSSNSRKKMSHN 248

Query: 442  KTNDK-SVLSADSAGNALNVPETKLKKINNEGSDTFANHEASGVDADVTEREKAPVCDHQ 618
               DK    S+ S+ ++ NV + K+   N+E S+                  KA +   +
Sbjct: 249  NNKDKMKTSSSSSSSSSCNVQKKKVTTSNDEESEN---------------GNKAKIGSSE 293

Query: 619  PXXXXXXXXXXXXXXXXXXXXXXWADEKKDDNAKXXXXXXXXXXXXXVDDDDHAFRLXXX 798
            P                      WAD++                     D +H FR+   
Sbjct: 294  PSCSVGGLKSSLKSSSRTNRSVSWADDQT-----------LCEYSGNDPDPEHTFRVASA 342

Query: 799  XXXXXXXXXXXXXXXSGEFDAPDAVTEAGLVILPPPHDDNKVVSEGTVDPEPAPVKWPQK 978
                           SGE DAPDA  EA                      EP  +KWP+K
Sbjct: 343  EACAAALSQAAEAVASGESDAPDAEAEA----------------------EPTRLKWPKK 380

Query: 979  TGIVEADFLDS-EDSWFDSPPEEFVVDLSPFGTMFMSLFAWVSSSTLAYVYGRDDSFHED 1155
            TGI E+D  DS EDSWFD+PPEEFV+DLSPF  MFMSLFAWVSSSTLAYVYG DDS    
Sbjct: 381  TGITESDVFDSFEDSWFDAPPEEFVLDLSPFARMFMSLFAWVSSSTLAYVYGGDDSC--- 437

Query: 1156 YASVNGREYPRKIVLTDGRSSEIKQTLAGCLSRALPGLLRDLRVPTPVSTIEFGLGSLIE 1335
            YA VNGREYPR +VL DGRS+EIK TLAGCLSRALPGL+R LR+PTPVSTIE  +G L++
Sbjct: 438  YAWVNGREYPRIVVLADGRSAEIKTTLAGCLSRALPGLVRHLRLPTPVSTIESMMGCLLD 497

Query: 1336 TMSFLDALPGLRMKQWKVFVLLFIEGLSVCRIPAIAPHLTNKRSFFQKVFDD 1491
            TMSF+DALP LRMKQW+VFVLLF++ LSV RIPA+ PHL NKR FFQKVFDD
Sbjct: 498  TMSFIDALPPLRMKQWQVFVLLFVDALSVSRIPAMTPHLANKRRFFQKVFDD 549


>emb|CAN62034.1| hypothetical protein VITISV_014731 [Vitis vinifera]
          Length = 659

 Score =  334 bits (856), Expect = e-104
 Identities = 196/439 (44%), Positives = 258/439 (58%), Gaps = 28/439 (6%)
 Frame = +1

Query: 256  EGSKFKDSKLKKEENKIFNEMDFMSTIIMHDDGYSVSKQPSEPASKSPGTTSENSRKKMN 435
            EGSK  +SK+   +N + +EMDF+STII  D+ YS+SK     +SK    T+ +++ K  
Sbjct: 196  EGSKSSNSKMDSGKNFVIDEMDFVSTIITKDE-YSISK-----SSKGLKDTTSHAKSKEP 249

Query: 436  RKKTN--DKSVLSADSAGNALNVPETKLKKINNEGS-----DTFANHEASGVDAD----- 579
            ++K +  D+  +   SA    N  E+KL++     S     D F+  E   V +      
Sbjct: 250  KEKASIGDQLSMLEKSAPPIQNDSESKLRESKGRRSRVIFKDEFSTAEVPSVPSQSGSEL 309

Query: 580  --VTEREKAPVCDH-QPXXXXXXXXXXXXXXXXXXXXXXWADEKKDD----------NAK 720
              V  +E+    +  Q                       WADEK D             +
Sbjct: 310  NGVKGKEEYHTENAAQLGPTKPKSSLKPSGGKKVIRSVTWADEKMDSADSRDFCKVRELE 369

Query: 721  XXXXXXXXXXXXXVDDDDHAFRLXXXXXXXXXXXXXXXXXXSGEFDAPDAVTEAGLVILP 900
                         V DDD+A R                   SGE D  DAV+EAG++ILP
Sbjct: 370  VKKEDPNGLGDIDVGDDDNALRFASAEACAVALSQAAEAVASGETDMTDAVSEAGIIILP 429

Query: 901  PPHDDNKVVSEGTVD---PEPAPVKWPQKTGIVEADFLDSEDSWFDSPPEEFVVDLSPFG 1071
             P D ++  S    D   PEP P+KWP K GI  +D  DS+DSW+D+PPE F + LSPF 
Sbjct: 430  HPRDMDEGESLKDADLLEPEPVPLKWPIKPGISHSDIFDSDDSWYDTPPEGFSLTLSPFA 489

Query: 1072 TMFMSLFAWVSSSTLAYVYGRDDSFHEDYASVNGREYPRKIVLTDGRSSEIKQTLAGCLS 1251
            TM+M+LFAW++SS++AY+YGRD+SFHE+Y SVNGREYP+KIVLTDGRSSEIKQTLAGCLS
Sbjct: 490  TMWMALFAWITSSSIAYIYGRDESFHEEYLSVNGREYPKKIVLTDGRSSEIKQTLAGCLS 549

Query: 1252 RALPGLLRDLRVPTPVSTIEFGLGSLIETMSFLDALPGLRMKQWKVFVLLFIEGLSVCRI 1431
            RALPGL+ DLR+P PVS +E G+G L++TMSF+DALP  RMKQW+V VLLFI+ LSVCRI
Sbjct: 550  RALPGLVADLRLPIPVSNLEQGVGRLLDTMSFVDALPSFRMKQWQVIVLLFIDALSVCRI 609

Query: 1432 PAIAPHLTNKRSFFQKVFD 1488
            PA+ PH+T++R  F KVFD
Sbjct: 610  PALTPHMTSRRMLFPKVFD 628


>ref|XP_018851159.1| PREDICTED: putative RNA polymerase II subunit B1 CTD phosphatase
            RPAP2 homolog [Juglans regia]
 ref|XP_018851160.1| PREDICTED: putative RNA polymerase II subunit B1 CTD phosphatase
            RPAP2 homolog [Juglans regia]
 ref|XP_018851161.1| PREDICTED: putative RNA polymerase II subunit B1 CTD phosphatase
            RPAP2 homolog [Juglans regia]
 ref|XP_018851162.1| PREDICTED: putative RNA polymerase II subunit B1 CTD phosphatase
            RPAP2 homolog [Juglans regia]
          Length = 664

 Score =  326 bits (835), Expect = e-101
 Identities = 186/453 (41%), Positives = 250/453 (55%), Gaps = 43/453 (9%)
 Frame = +1

Query: 259  GSKFKDSKLKKEENKIFNEMDFMSTIIMHDDGYSVSKQPS------------EPASK--- 393
            GSK + +KL  E + + NEMDF+STII  D+ YSVSK PS            EP  K   
Sbjct: 197  GSKARHTKLNSETDFVINEMDFISTIITEDE-YSVSKMPSGSTKTPSDAKIREPKGKVNC 255

Query: 394  -----------SPGTTSENSRKKMNRKKTNDKSVLSADSAGNALNVPETKLKKINNEGSD 540
                        P T ++N+ ++ +RK   ++S ++     + + +P T      +    
Sbjct: 256  KDLEDQVAICEKPSTPTKNAGERKSRKSKGEESRMATKGDHSIIGLPSTSNPCPTSSSVS 315

Query: 541  TFANHEASGVDADVTEREKAPVCDHQPXXXXXXXXXXXXXXXXXXXXXXWADEKKDDNA- 717
            T    E + ++     +E       +P                      WADEK D +  
Sbjct: 316  TAEAEEEADIEKAAMSKETTLKSSFKPSGMKKSGRTVT-----------WADEKVDGSGD 364

Query: 718  ---------KXXXXXXXXXXXXXVDDDDHAFRLXXXXXXXXXXXXXXXXXXSGEFDAPDA 870
                     +             V+D+D   R                   SGE DA DA
Sbjct: 365  GNLCELRDIEDKKEAPERLSAKDVEDNDEKLRFEWAEACAIALNEAAEAVASGESDARDA 424

Query: 871  VTEAGLVILPPPHDDNKVVSEGTV-------DPEPAPVKWPQKTGIVEADFLDSEDSWFD 1029
            V+EAG++ILP P D    V EG +       + EPAP+ WP+  G+  ++  + EDSW+D
Sbjct: 425  VSEAGIIILPHPQD----VDEGELMDDIDMLESEPAPLNWPRNPGVSHSELFNPEDSWYD 480

Query: 1030 SPPEEFVVDLSPFGTMFMSLFAWVSSSTLAYVYGRDDSFHEDYASVNGREYPRKIVLTDG 1209
            +PPE F + LSPF TM+M+LFAW ++S+LAY+YGRD+SFHE+Y S+NGREYP KIVL DG
Sbjct: 481  APPEGFNLTLSPFATMWMALFAWTTASSLAYIYGRDESFHEEYHSINGREYPNKIVLADG 540

Query: 1210 RSSEIKQTLAGCLSRALPGLLRDLRVPTPVSTIEFGLGSLIETMSFLDALPGLRMKQWKV 1389
            RSSEIKQTLAGCL+RALPGL+ DLR+PTP+S +E GLG L++TM+F+DALP  R KQW+V
Sbjct: 541  RSSEIKQTLAGCLARALPGLVADLRLPTPISILERGLGRLLDTMTFMDALPAFRSKQWQV 600

Query: 1390 FVLLFIEGLSVCRIPAIAPHLTNKRSFFQKVFD 1488
             VLLFIE LSVCRIPA+  HLTN+R F  KV D
Sbjct: 601  IVLLFIEALSVCRIPALTSHLTNRRMFLTKVLD 633


>ref|XP_002280625.1| PREDICTED: putative RNA polymerase II subunit B1 CTD phosphatase
            RPAP2 homolog [Vitis vinifera]
 ref|XP_010659731.1| PREDICTED: putative RNA polymerase II subunit B1 CTD phosphatase
            RPAP2 homolog [Vitis vinifera]
 ref|XP_019080856.1| PREDICTED: putative RNA polymerase II subunit B1 CTD phosphatase
            RPAP2 homolog [Vitis vinifera]
 emb|CBI39649.3| unnamed protein product, partial [Vitis vinifera]
          Length = 659

 Score =  325 bits (834), Expect = e-100
 Identities = 192/439 (43%), Positives = 255/439 (58%), Gaps = 28/439 (6%)
 Frame = +1

Query: 256  EGSKFKDSKLKKEENKIFNEMDFMSTIIMHDDGYSVSKQPSEPASKSPGTTSENSRKKMN 435
            EGSK  +SK+   +N + +EMDF+ TII  D+ YS+SK     +SK    T+ +++ K  
Sbjct: 196  EGSKSSNSKMDSGKNFVIDEMDFVRTIITEDE-YSISK-----SSKGLKDTTSHAKSKEP 249

Query: 436  RKKTN--DKSVLSADSAGNALNVPETKLKKINNEGS-----DTFANHEASGVDAD----- 579
            ++K +  D+  +   SA    N  E+KL++     S     D F+  E   V +      
Sbjct: 250  KEKASIGDQLSMLEKSAPPIQNDSESKLRESKGRRSRVIFKDEFSTAEVPSVPSQSGSEL 309

Query: 580  --VTEREKAPVCDH-QPXXXXXXXXXXXXXXXXXXXXXXWADEKKDD----------NAK 720
              V  +E+    +  Q                       WADEK D             +
Sbjct: 310  NGVKGKEEYHTENAAQLGPTKLKSCLKPSGGKKVTRSVTWADEKMDSADSRDFCKVRELE 369

Query: 721  XXXXXXXXXXXXXVDDDDHAFRLXXXXXXXXXXXXXXXXXXSGEFDAPDAVTEAGLVILP 900
                         V DDD+A R                   SGE D  DAV+EA ++ILP
Sbjct: 370  VKKEDPNGLGDIDVGDDDNALRFASAEACAIALSQAAEAVASGETDMTDAVSEARIIILP 429

Query: 901  PPHDDNKVVSEGTVD---PEPAPVKWPQKTGIVEADFLDSEDSWFDSPPEEFVVDLSPFG 1071
             P D ++  S    D   PEP P+KWP K GI  +D  DS+DSW+D+PPE F + LSPF 
Sbjct: 430  HPRDMDEGESLKDADLLEPEPVPLKWPIKPGISHSDIFDSDDSWYDTPPEGFSLTLSPFA 489

Query: 1072 TMFMSLFAWVSSSTLAYVYGRDDSFHEDYASVNGREYPRKIVLTDGRSSEIKQTLAGCLS 1251
            TM+M+LFAW++SS++AY+YGRD+SFHE+Y SVNGREYP+KIVLTDGRSSEIKQTLAGCL+
Sbjct: 490  TMWMALFAWITSSSIAYIYGRDESFHEEYLSVNGREYPKKIVLTDGRSSEIKQTLAGCLA 549

Query: 1252 RALPGLLRDLRVPTPVSTIEFGLGSLIETMSFLDALPGLRMKQWKVFVLLFIEGLSVCRI 1431
            RALPGL+ DLR+P PVS +E G+G L++TMSF+DALP  RMKQW+V VLLFI+ LSVC+I
Sbjct: 550  RALPGLVADLRLPIPVSNLEQGVGRLLDTMSFVDALPSFRMKQWQVIVLLFIDALSVCQI 609

Query: 1432 PAIAPHLTNKRSFFQKVFD 1488
            PA+ PH+ +KR  F KVFD
Sbjct: 610  PALTPHMISKRMLFPKVFD 628


>ref|XP_023891791.1| putative RNA polymerase II subunit B1 CTD phosphatase RPAP2 homolog
            [Quercus suber]
          Length = 663

 Score =  318 bits (815), Expect = 8e-98
 Identities = 183/442 (41%), Positives = 250/442 (56%), Gaps = 31/442 (7%)
 Frame = +1

Query: 256  EGSKFKDSKLKKEENKIFNEMDFMSTIIMHDDGYSVSKQPSEPASKSPGTTSENSRKKMN 435
            EGSK  ++    +++   +EMDFMSTII  D+ YSVSK PS     +  T  +  ++KM+
Sbjct: 196  EGSKVNNTMSSGKKDFHISEMDFMSTIITEDE-YSVSKMPSGSTETASNTKFKEPKEKMS 254

Query: 436  ------------------RKKTNDKSVLSADSAGNALNVPETKLKKINNEGSDTFANHEA 561
                              +  +  KS  S       +   + +++++ +  +    +  +
Sbjct: 255  YMDLDGQLSTLENPPALTKNGSEWKSSGSIGEKSKIIKKDDPRIQEVPSASNPCQTSFNS 314

Query: 562  SGVDADV-TEREKAPVCDHQPXXXXXXXXXXXXXXXXXXXXXXWADEKKDDNAKXXXXXX 738
            S V+A+   + EKA     +                       WADEK D          
Sbjct: 315  STVEAEEEVQAEKAA----KSSKIMIKSSLKPSGTKKLSRSVTWADEKVDGTGSGNLCEF 370

Query: 739  XXXXXXX---------VDDDDHAFRLXXXXXXXXXXXXXXXXXXSGEFDAPDAVTEAGLV 891
                            V D+D   R                   SGEFD  DAV+EAG+ 
Sbjct: 371  SDGENKESNEILGSTDVGDNDEMLRFASAEAVAIALSEAAEAVASGEFDVTDAVSEAGIT 430

Query: 892  ILPPPHD--DNKVVSEGTV-DPEPAPVKWPQKTGIVEADFLDSEDSWFDSPPEEFVVDLS 1062
            ILP  HD  + +++ +G + +PEPAP+KWP K GI ++ F D EDS +D PPE F + LS
Sbjct: 431  ILPHSHDADEGELMEDGDLLEPEPAPLKWPTKPGIPQSYFFDPEDSLYDPPPEGFGLSLS 490

Query: 1063 PFGTMFMSLFAWVSSSTLAYVYGRDDSFHEDYASVNGREYPRKIVLTDGRSSEIKQTLAG 1242
            PF TM+M+LF+W++SS+LAY+YGRD+S HE+Y SVNGREYP KI L DGRS+EIKQTLAG
Sbjct: 491  PFATMWMALFSWITSSSLAYIYGRDESLHEEYLSVNGREYPCKITLADGRSTEIKQTLAG 550

Query: 1243 CLSRALPGLLRDLRVPTPVSTIEFGLGSLIETMSFLDALPGLRMKQWKVFVLLFIEGLSV 1422
            CL+RALPGL  DLR+PTP+ST+E G+G L++TM+F+DALP  RMKQW+V VLLFIE LSV
Sbjct: 551  CLARALPGLSADLRLPTPISTLEQGMGRLLDTMTFVDALPAFRMKQWQVIVLLFIEALSV 610

Query: 1423 CRIPAIAPHLTNKRSFFQKVFD 1488
            CRIPA+ PH+TN+R   QKV D
Sbjct: 611  CRIPALTPHMTNRRMLMQKVLD 632


>gb|POE61564.1| putative rna polymerase ii subunit b1 ctd phosphatase rpap2 like
            [Quercus suber]
          Length = 681

 Score =  318 bits (815), Expect = 1e-97
 Identities = 183/442 (41%), Positives = 250/442 (56%), Gaps = 31/442 (7%)
 Frame = +1

Query: 256  EGSKFKDSKLKKEENKIFNEMDFMSTIIMHDDGYSVSKQPSEPASKSPGTTSENSRKKMN 435
            EGSK  ++    +++   +EMDFMSTII  D+ YSVSK PS     +  T  +  ++KM+
Sbjct: 214  EGSKVNNTMSSGKKDFHISEMDFMSTIITEDE-YSVSKMPSGSTETASNTKFKEPKEKMS 272

Query: 436  ------------------RKKTNDKSVLSADSAGNALNVPETKLKKINNEGSDTFANHEA 561
                              +  +  KS  S       +   + +++++ +  +    +  +
Sbjct: 273  YMDLDGQLSTLENPPALTKNGSEWKSSGSIGEKSKIIKKDDPRIQEVPSASNPCQTSFNS 332

Query: 562  SGVDADV-TEREKAPVCDHQPXXXXXXXXXXXXXXXXXXXXXXWADEKKDDNAKXXXXXX 738
            S V+A+   + EKA     +                       WADEK D          
Sbjct: 333  STVEAEEEVQAEKAA----KSSKIMIKSSLKPSGTKKLSRSVTWADEKVDGTGSGNLCEF 388

Query: 739  XXXXXXX---------VDDDDHAFRLXXXXXXXXXXXXXXXXXXSGEFDAPDAVTEAGLV 891
                            V D+D   R                   SGEFD  DAV+EAG+ 
Sbjct: 389  SDGENKESNEILGSTDVGDNDEMLRFASAEAVAIALSEAAEAVASGEFDVTDAVSEAGIT 448

Query: 892  ILPPPHD--DNKVVSEGTV-DPEPAPVKWPQKTGIVEADFLDSEDSWFDSPPEEFVVDLS 1062
            ILP  HD  + +++ +G + +PEPAP+KWP K GI ++ F D EDS +D PPE F + LS
Sbjct: 449  ILPHSHDADEGELMEDGDLLEPEPAPLKWPTKPGIPQSYFFDPEDSLYDPPPEGFGLSLS 508

Query: 1063 PFGTMFMSLFAWVSSSTLAYVYGRDDSFHEDYASVNGREYPRKIVLTDGRSSEIKQTLAG 1242
            PF TM+M+LF+W++SS+LAY+YGRD+S HE+Y SVNGREYP KI L DGRS+EIKQTLAG
Sbjct: 509  PFATMWMALFSWITSSSLAYIYGRDESLHEEYLSVNGREYPCKITLADGRSTEIKQTLAG 568

Query: 1243 CLSRALPGLLRDLRVPTPVSTIEFGLGSLIETMSFLDALPGLRMKQWKVFVLLFIEGLSV 1422
            CL+RALPGL  DLR+PTP+ST+E G+G L++TM+F+DALP  RMKQW+V VLLFIE LSV
Sbjct: 569  CLARALPGLSADLRLPTPISTLEQGMGRLLDTMTFVDALPAFRMKQWQVIVLLFIEALSV 628

Query: 1423 CRIPAIAPHLTNKRSFFQKVFD 1488
            CRIPA+ PH+TN+R   QKV D
Sbjct: 629  CRIPALTPHMTNRRMLMQKVLD 650


>dbj|GAV89229.1| RPAP2_Rtr1 domain-containing protein [Cephalotus follicularis]
          Length = 639

 Score =  312 bits (800), Expect = 7e-96
 Identities = 186/426 (43%), Positives = 239/426 (56%), Gaps = 15/426 (3%)
 Frame = +1

Query: 256  EGSKFKDSKLKKEENKIFNEMDFMSTIIMHDDGYSVSKQ-PSEPASKSPGTTSENSRKKM 432
            EGS     K   E+N I NEMDFMS II+ D+ YS+SK  P    +       EN   K 
Sbjct: 195  EGSNASSRKSISEKNLIINEMDFMSAIILEDE-YSISKSSPVNACNTKTEEPKENEIHKD 253

Query: 433  NRKKTNDKSVLSADSAGNA---LNVPETKLKKI------NNEGSDTFANHEASGVDADVT 585
               +  + ++LSA    N+    + P  K  KI      +N    + +N   +G D  V 
Sbjct: 254  LEDQFANLALLSAPIEKNSDRKSSKPRGKKSKIVEKDKLSNPELPSTSNFCQTGSDTSVA 313

Query: 586  EREKAPVCDHQPXXXXXXXXXXXXXXXXXXXXXXWADEKKDDNAKXXXXXXXXXXXXXVD 765
            E EK                              WAD+K D+                VD
Sbjct: 314  EAEKDFHNVKAATPNDLKTSLKSAGGKKFNRSVTWADQKIDNVGSRD-----------VD 362

Query: 766  DDDHAFRLXXXXXXXXXXXXXXXXXXSGEFDAPDAVTEAGLVILPPPHDDNKVVSEGTVD 945
            DDD+  R                   SG+ DA + V+EAG++ILP  H+ ++      VD
Sbjct: 363  DDDNISRFASAEACAVALSQAVEAVASGDSDAMNDVSEAGIIILPRSHNGDEEDRVENVD 422

Query: 946  -----PEPAPVKWPQKTGIVEADFLDSEDSWFDSPPEEFVVDLSPFGTMFMSLFAWVSSS 1110
                 PEPAPVKWP+K GI ++D  D E+SW D PPE F + LSPF TM+M+LF W++SS
Sbjct: 423  MLEPEPEPAPVKWPRKPGIPQSDLFDPENSWHDDPPEGFSLTLSPFATMWMALFEWITSS 482

Query: 1111 TLAYVYGRDDSFHEDYASVNGREYPRKIVLTDGRSSEIKQTLAGCLSRALPGLLRDLRVP 1290
            +LAY+YGRD+S +EDY +VNGREYPR+IVL DGRSSEIKQTLA CLSRALPGL+ DLR+P
Sbjct: 483  SLAYIYGRDESIYEDYLTVNGREYPRRIVLEDGRSSEIKQTLAACLSRALPGLVSDLRLP 542

Query: 1291 TPVSTIEFGLGSLIETMSFLDALPGLRMKQWKVFVLLFIEGLSVCRIPAIAPHLTNKRSF 1470
             PVS++E G+G L+ETMSFL+ALP   MKQW++ +LLF EGLSVC IP +  H+TN R  
Sbjct: 543  IPVSSLEQGMGCLLETMSFLNALPAFSMKQWQLIILLFFEGLSVCSIPELTQHMTNGRML 602

Query: 1471 FQKVFD 1488
             QKV D
Sbjct: 603  VQKVLD 608


>ref|XP_017983793.1| PREDICTED: putative RNA polymerase II subunit B1 CTD phosphatase
            RPAP2 homolog isoform X1 [Theobroma cacao]
          Length = 685

 Score =  308 bits (788), Expect = 1e-93
 Identities = 177/416 (42%), Positives = 237/416 (56%), Gaps = 16/416 (3%)
 Frame = +1

Query: 289  KEENKIFNEMDFMSTIIMHDDGYSVSKQPSEPASKSPGTTSENSRKKMNRKKTNDKSVLS 468
            K+E+ + NEMDF S IIM+D+ Y++SK PS        +  +   ++   K + DK V+S
Sbjct: 247  KKEDFVINEMDFTSEIIMNDE-YTISKMPSGSKQSCFDSNLKEVEERGICKDSEDKCVIS 305

Query: 469  ADSAGNALNVPETKLKKINNEGSDTFANHEASGVDADVTEREKAPVCDHQ--PXXXXXXX 642
              S+  AL   ++ + ++ +       N   SG+D    E EK    D            
Sbjct: 306  GSSS--ALREKDSSIVELPST-----KNVYQSGLDTSSAEAEKETHADKAVTSSETVLKS 358

Query: 643  XXXXXXXXXXXXXXXWADEKKDDNAKXXXXXXXXXXXXXVDD-----------DDHAFRL 789
                           WAD+KK DNA                D           DD+  R 
Sbjct: 359  SLKSAGAKKLNRFVTWADKKKADNAGNGNLCEVKEMETMKGDSEICGSAEDGGDDNMLRF 418

Query: 790  XXXXXXXXXXXXXXXXXXSGEFDAPDAVTEAGLVILPP--PHDDNKVVSEGTV-DPEPAP 960
                              SG+ D  DAV E GL+ILP     D  + + +G + +PE AP
Sbjct: 419  VSAEACAMALSKAAEAVASGDSDVTDAVYENGLIILPSLCEADKEEPMEDGDMLEPETAP 478

Query: 961  VKWPQKTGIVEADFLDSEDSWFDSPPEEFVVDLSPFGTMFMSLFAWVSSSTLAYVYGRDD 1140
            VKWP+K GI  +D  +SEDSWFD+PPE F + LS F TM+ +LF W++SS+LAY+YGRD+
Sbjct: 479  VKWPKKPGIPHSDMFNSEDSWFDAPPEGFSLTLSTFATMWNALFEWITSSSLAYIYGRDE 538

Query: 1141 SFHEDYASVNGREYPRKIVLTDGRSSEIKQTLAGCLSRALPGLLRDLRVPTPVSTIEFGL 1320
            SFHE+Y S+NGREYPRKI L DGRSSEIK+TLA C+SRALP ++ DLR+P P+ST+E G+
Sbjct: 539  SFHEEYLSINGREYPRKIALRDGRSSEIKETLASCISRALPAIVTDLRLPIPISTLEQGM 598

Query: 1321 GSLIETMSFLDALPGLRMKQWKVFVLLFIEGLSVCRIPAIAPHLTNKRSFFQKVFD 1488
            G LI+T+SF++ALP  RMKQW+V VLLFI+ LSVCRIPA+ PH+TN R    KV D
Sbjct: 599  GHLIDTISFMEALPAFRMKQWQVIVLLFIDALSVCRIPALTPHMTNGRMLLHKVLD 654


>ref|XP_016471494.1| PREDICTED: putative RNA polymerase II subunit B1 CTD phosphatase
            RPAP2 homolog [Nicotiana tabacum]
 ref|XP_016471495.1| PREDICTED: putative RNA polymerase II subunit B1 CTD phosphatase
            RPAP2 homolog [Nicotiana tabacum]
          Length = 664

 Score =  306 bits (783), Expect = 4e-93
 Identities = 179/447 (40%), Positives = 246/447 (55%), Gaps = 29/447 (6%)
 Frame = +1

Query: 235  ALIDMDYEGSKFKDSKLKKEENKIFNEMDFMSTIIMHDDGYSVSKQPSEPASKSPGTTSE 414
            AL++   +G K K +KL+ ++N I NEMDF STII  D GYS+SK P+     S    +E
Sbjct: 189  ALLNNIKKGFKNKQTKLQNKKNMILNEMDFSSTIITQD-GYSISKLPAPINVVSSKKVNE 247

Query: 415  NSRKKMNRKKTNDKSVLSADSAGNALNVPETKLKKINNEGS---DTFANHEASGVDADVT 585
               K        D S+L        L   E   K  +N+ S   D F N E S       
Sbjct: 248  AQTKTSYEVGDADVSILGKQVDVLQLYSGEETEKTDSNDRSYKVDKFNNREVSSGPCQHD 307

Query: 586  EREKAP------------VCDHQPXXXXXXXXXXXXXXXXXXXXXXWADEKKDDN----- 714
             R K+               D                         WADE  D+      
Sbjct: 308  VRNKSLEVLNMSDAGREYASDGAREKQSLRSSLKSSNYKKMARSVTWADENIDNGTGKKM 367

Query: 715  ------AKXXXXXXXXXXXXXVDDDDHAFRLXXXXXXXXXXXXXXXXXXSGEFDAPDAVT 876
                  ++             +++DD ++R                   SG  D PDAV+
Sbjct: 368  ECSAEISEEANQAYMGSGPTDMEEDDDSYRFKSAEACAAALKQAAEAVASGS-DVPDAVS 426

Query: 877  EAGLVILPPPHDDNKVV---SEGTVDPEPAPVKWPQKTGIVEADFLDSEDSWFDSPPEEF 1047
             AG++ILPPP + ++ +   ++  +D EPAP+KWP+K G+   D  +SEDSW+DSPPE F
Sbjct: 427  HAGIIILPPPQEVDEAILQENDEVLDTEPAPLKWPRKPGVPNYDVFESEDSWYDSPPEGF 486

Query: 1048 VVDLSPFGTMFMSLFAWVSSSTLAYVYGRDDSFHEDYASVNGREYPRKIVLTDGRSSEIK 1227
             ++LSPF TMF SLF W+SSS+L+++YG D+S +E+Y S+NGREYPRKIVL+DGRS+EIK
Sbjct: 487  NLNLSPFATMFNSLFTWISSSSLSFIYGNDESSNEEYLSINGREYPRKIVLSDGRSTEIK 546

Query: 1228 QTLAGCLSRALPGLLRDLRVPTPVSTIEFGLGSLIETMSFLDALPGLRMKQWKVFVLLFI 1407
            QTLA CL+RALPGL+ DLR+P P+S +E GL  LI+TMSF+D LP  RMKQW++ VLLF+
Sbjct: 547  QTLARCLARALPGLVADLRLPVPISVLEQGLVLLIDTMSFVDPLPAFRMKQWQLIVLLFL 606

Query: 1408 EGLSVCRIPAIAPHLTNKRSFFQKVFD 1488
            + LS+CRIP + P++T +R+   KV D
Sbjct: 607  DALSICRIPVLTPYMTGRRTLLPKVLD 633


>ref|XP_009771014.1| PREDICTED: putative RNA polymerase II subunit B1 CTD phosphatase
            RPAP2 homolog isoform X1 [Nicotiana sylvestris]
 ref|XP_009771015.1| PREDICTED: putative RNA polymerase II subunit B1 CTD phosphatase
            RPAP2 homolog isoform X1 [Nicotiana sylvestris]
 ref|XP_016508615.1| PREDICTED: putative RNA polymerase II subunit B1 CTD phosphatase
            RPAP2 homolog isoform X1 [Nicotiana tabacum]
 ref|XP_016508625.1| PREDICTED: putative RNA polymerase II subunit B1 CTD phosphatase
            RPAP2 homolog isoform X1 [Nicotiana tabacum]
          Length = 664

 Score =  305 bits (781), Expect = 9e-93
 Identities = 177/447 (39%), Positives = 248/447 (55%), Gaps = 29/447 (6%)
 Frame = +1

Query: 235  ALIDMDYEGSKFKDSKLKKEENKIFNEMDFMSTIIMHDDGYSVSKQPSEPASKSPGTTSE 414
            AL++   + SK K +KL+ E+N I +EMDF STII  D GYS+SK P+   + S     E
Sbjct: 189  ALLNNIKKSSKNKQAKLQNEKNMILHEMDFSSTIITQD-GYSISKLPAPVNAVSSKKVKE 247

Query: 415  NSRKKMNRKKTNDKSVLSADSAGNALNVPETKLKKINNEGS---DTFANHEASGVDA--- 576
               +     +  D S+L        L+  E   K  +N  S   D F   E S       
Sbjct: 248  AQTRTSYEVRDVDVSILGKQVDALQLHSGEETEKTDSNNRSYKVDKFNTGEVSSGPCQHD 307

Query: 577  ---------DVTEREKAPVCDHQPXXXXXXXXXXXXXXXXXXXXXXWADEKKDDN----- 714
                     ++++  +    D                         WADE  D+      
Sbjct: 308  VKNKSLEVLNMSDAGREYASDDAREKQSLRSSLKSSKYKKMARSVTWADENVDNGTGKLT 367

Query: 715  ------AKXXXXXXXXXXXXXVDDDDHAFRLXXXXXXXXXXXXXXXXXXSGEFDAPDAVT 876
                  ++             +++DD ++R                   SG  D PDAV+
Sbjct: 368  ESSSEISEKGDQANRESGPTNMEEDDDSYRFESAEACAAALKQAAEAVASGS-DVPDAVS 426

Query: 877  EAGLVILPPPHDDNKVV---SEGTVDPEPAPVKWPQKTGIVEADFLDSEDSWFDSPPEEF 1047
             AG++ILPPP + ++ V   ++  +D EPAP+KWP+K G+   D  +SEDSW+DSPPE F
Sbjct: 427  TAGIIILPPPKEVDEAVLKENDEVLDIEPAPLKWPRKPGVPNYDVFESEDSWYDSPPEGF 486

Query: 1048 VVDLSPFGTMFMSLFAWVSSSTLAYVYGRDDSFHEDYASVNGREYPRKIVLTDGRSSEIK 1227
             ++LSPF TMF SLF W+SSS+L+++YG D+SF+E+Y SVNG EYPRKIVL+DGRS+EIK
Sbjct: 487  NLNLSPFSTMFNSLFTWISSSSLSFIYGNDESFNEEYLSVNGSEYPRKIVLSDGRSTEIK 546

Query: 1228 QTLAGCLSRALPGLLRDLRVPTPVSTIEFGLGSLIETMSFLDALPGLRMKQWKVFVLLFI 1407
            QTLA CL+RALPGL+ DLR+P P+S +E GL  LI+TMSF+D LP  RMKQW++ VLLF+
Sbjct: 547  QTLARCLARALPGLVADLRLPVPISVLEQGLVLLIDTMSFVDPLPAFRMKQWQLIVLLFL 606

Query: 1408 EGLSVCRIPAIAPHLTNKRSFFQKVFD 1488
            + LS+CRIP + P++T +R+   KV D
Sbjct: 607  DALSICRIPVLTPYMTGRRTLLPKVLD 633


>ref|XP_021278276.1| putative RNA polymerase II subunit B1 CTD phosphatase RPAP2 homolog
            [Herrania umbratica]
          Length = 685

 Score =  305 bits (782), Expect = 1e-92
 Identities = 178/417 (42%), Positives = 237/417 (56%), Gaps = 16/417 (3%)
 Frame = +1

Query: 286  KKEENKIFNEMDFMSTIIMHDDGYSVSKQPSEPASKSPGTTSENSRKKMNRKKTNDKSVL 465
            +K+E+ + NEMDF S IIM+D+ Y++SK PS        +  +    K   K   DK V+
Sbjct: 246  RKKEDFVINEMDFTSEIIMNDE-YTISKMPSGLRQSCFDSNLKEVEGKGICKDFEDKCVI 304

Query: 466  SADSAGNALNVPETKLKKINNEGSDTFANHEASGVDADVTEREKAPVCDHQ--PXXXXXX 639
            S  S+  AL   ++ + ++ +       N   +G+D    E EK    D           
Sbjct: 305  SGSSS--ALREKDSSIVELPST-----KNVYQTGLDTSSAEAEKETHADKAVASSETLIK 357

Query: 640  XXXXXXXXXXXXXXXXWADEKKDDNAKXXXXXXXXXXXXXVDD-----------DDHAFR 786
                            WAD+KK DNA                D           DD+  R
Sbjct: 358  SSLKSAGAKNHNRSVTWADKKKVDNAGNGNLCEVKDMETMKGDSEICGSAEDGGDDNMLR 417

Query: 787  LXXXXXXXXXXXXXXXXXXSGEFDAPDAVTEAGLVILPPP--HDDNKVVSEGTV-DPEPA 957
                               SG+ D  DA  E GL+ILP P   D  + + +G + +PE A
Sbjct: 418  FVSAEACAMALSKAAEAVASGDSDVTDAGYENGLIILPSPCEADKEEPMEDGDMLEPETA 477

Query: 958  PVKWPQKTGIVEADFLDSEDSWFDSPPEEFVVDLSPFGTMFMSLFAWVSSSTLAYVYGRD 1137
            PVKWP+K GI  +D L+ EDSWFD+PPE F + LS F TM+ +LF W +SS+LAY+YGR+
Sbjct: 478  PVKWPKKPGIPHSDMLNPEDSWFDAPPEGFSLTLSTFATMWNALFEWTTSSSLAYIYGRE 537

Query: 1138 DSFHEDYASVNGREYPRKIVLTDGRSSEIKQTLAGCLSRALPGLLRDLRVPTPVSTIEFG 1317
            +SFHE+Y SVNGREYP+KIV+ DGRSSEIK+TLAGC+SRALP ++ DLR+P P+ST+E G
Sbjct: 538  ESFHEEYLSVNGREYPQKIVIRDGRSSEIKETLAGCISRALPAIVTDLRLPIPISTLEQG 597

Query: 1318 LGSLIETMSFLDALPGLRMKQWKVFVLLFIEGLSVCRIPAIAPHLTNKRSFFQKVFD 1488
            +G LI+TMSF++ALP  RMKQW+V VLLFI+ LSVCRIPA+ PH+TN R    KV D
Sbjct: 598  MGHLIDTMSFVEALPAFRMKQWQVIVLLFIDALSVCRIPALTPHMTNGRMLLHKVLD 654


>gb|EOY34545.1| F2P16.20 protein, putative isoform 1 [Theobroma cacao]
          Length = 739

 Score =  306 bits (785), Expect = 1e-92
 Identities = 177/416 (42%), Positives = 236/416 (56%), Gaps = 16/416 (3%)
 Frame = +1

Query: 289  KEENKIFNEMDFMSTIIMHDDGYSVSKQPSEPASKSPGTTSENSRKKMNRKKTNDKSVLS 468
            K+E+ + NEMDF S IIM+D+ Y++SK PS        +  +   +K   K + DK V+S
Sbjct: 301  KKEDFVINEMDFTSEIIMNDE-YTISKMPSGSKQSCFDSNLKEVEEKGICKDSEDKCVIS 359

Query: 469  ADSAGNALNVPETKLKKINNEGSDTFANHEASGVDADVTEREKAPVCDHQ--PXXXXXXX 642
              S+  AL   ++ + ++ +       N   SG+D    E EK    D            
Sbjct: 360  GSSS--ALREKDSSIVELPST-----KNVYQSGLDTSSAEAEKETHADKAVTSSETVLKS 412

Query: 643  XXXXXXXXXXXXXXXWADEKKDDNAKXXXXXXXXXXXXXVDD-----------DDHAFRL 789
                           WAD+KK DNA                D           DD+  R 
Sbjct: 413  SLKSAGAKKLNRFVTWADKKKADNAGNGNLCEVKEMETMKGDSEISGSAEDGGDDNMLRF 472

Query: 790  XXXXXXXXXXXXXXXXXXSGEFDAPDAVTEAGLVILPP--PHDDNKVVSEGTV-DPEPAP 960
                              SG+ D  DAV E GL+ILP     D  + + +G + +PE AP
Sbjct: 473  VSAEACAMALSKAAEAVASGDSDVTDAVYENGLIILPSLCEVDKEEPMEDGDMLEPETAP 532

Query: 961  VKWPQKTGIVEADFLDSEDSWFDSPPEEFVVDLSPFGTMFMSLFAWVSSSTLAYVYGRDD 1140
            VKWP+K GI  +D  + EDSWFD+PPE F + LS F TM+ +LF W++SS+LAY+YGRD+
Sbjct: 533  VKWPKKPGIPHSDMFNPEDSWFDAPPEGFSLTLSTFATMWNALFEWITSSSLAYIYGRDE 592

Query: 1141 SFHEDYASVNGREYPRKIVLTDGRSSEIKQTLAGCLSRALPGLLRDLRVPTPVSTIEFGL 1320
            SFHE+Y S+NGREYPRKI L DGRSSEIK+TLA C+SRALP ++ DLR+P P+ST+E G+
Sbjct: 593  SFHEEYLSINGREYPRKIALRDGRSSEIKETLASCISRALPAIVTDLRLPIPISTLEQGM 652

Query: 1321 GSLIETMSFLDALPGLRMKQWKVFVLLFIEGLSVCRIPAIAPHLTNKRSFFQKVFD 1488
            G LI+T+SF++ALP  RMKQW+V VLLFI+ LSVCRIPA+ PH+TN R    KV D
Sbjct: 653  GHLIDTISFMEALPAFRMKQWQVIVLLFIDALSVCRIPALTPHMTNGRMLLHKVLD 708


>ref|XP_004230345.1| PREDICTED: putative RNA polymerase II subunit B1 CTD phosphatase
            RPAP2 homolog [Solanum lycopersicum]
          Length = 660

 Score =  300 bits (769), Expect = 5e-91
 Identities = 176/444 (39%), Positives = 248/444 (55%), Gaps = 26/444 (5%)
 Frame = +1

Query: 235  ALIDMDYEGSKFKDSKLKKEENKIFNEMDFMSTIIMHDDGYSVSKQPSEPASKSPGTTSE 414
            AL+    +GSK K ++L+ E+N I NE DF STII  D+ YSVSK P+   + S     E
Sbjct: 189  ALLKNINKGSKNKHARLQDEKNMILNEFDFSSTIITQDE-YSVSKFPAPVNADSNVKFKE 247

Query: 415  NSRKKMNRKKTNDKSVLSA-----------DSAGNALNVPETKLKKINN-EGSDTFANHE 558
               K   + + +D  +L             ++  +  N    K+ K N+ E S   + H+
Sbjct: 248  TQAKTRYKVRDDDVYILGKQVDALQLRSGEETEKSDKNTRFLKVDKFNSGEVSSGPSQHD 307

Query: 559  ASGVDADVTEREKAPVCDHQPXXXXXXXXXXXXXXXXXXXXXXWADEKKDDN-------- 714
                   +   +      H                        WADE  D          
Sbjct: 308  VKNKSVLIMSDDGRKYASHGEHDKLKSSLKSSNSKKMSRSVT-WADESIDGGIGKKTESS 366

Query: 715  ---AKXXXXXXXXXXXXXVDDDDHAFRLXXXXXXXXXXXXXXXXXXSGEFDAPDAVTEAG 885
               ++             ++++D ++R                   SG  D PDAV++AG
Sbjct: 367  SKISEYESQAYGGSASTDMEENDDSYRFESAEACAAALSQAAEAVASGS-DVPDAVSKAG 425

Query: 886  LVILPPPHDDNKVVSEGT---VDPEPAPVKWPQKTGIVEADFLDSEDSWFDSPPEEFVVD 1056
            +VILPP  + ++ + + T   +D E AP+KWP+K G+   D  +SEDSW+DSPPE F + 
Sbjct: 426  IVILPPSQEVDEAILQETDEMLDLETAPLKWPRKPGMPNYDVFESEDSWYDSPPEGFNMT 485

Query: 1057 LSPFGTMFMSLFAWVSSSTLAYVYGRDDSFHEDYASVNGREYPRKIVLTDGRSSEIKQTL 1236
            LSPFGTMF SLF W+SSS+LA++YG D+S +E+Y S+NGREYPRKIVL+DGRS+EIKQTL
Sbjct: 486  LSPFGTMFNSLFTWISSSSLAFIYGHDESNNEEYLSINGREYPRKIVLSDGRSTEIKQTL 545

Query: 1237 AGCLSRALPGLLRDLRVPTPVSTIEFGLGSLIETMSFLDALPGLRMKQWKVFVLLFIEGL 1416
            AGCL+RALPGL+ DLR+P P+ST+E G+  L+ TMSF+D LP  RMKQW++ VLLF++ L
Sbjct: 546  AGCLARALPGLVADLRLPVPISTLEQGMVLLLNTMSFVDPLPAFRMKQWQLIVLLFLDAL 605

Query: 1417 SVCRIPAIAPHLTNKRSFFQKVFD 1488
            SVCRIP + P++T +R+ F KV D
Sbjct: 606  SVCRIPTLTPYMTGRRTSFPKVLD 629


>gb|OVA13023.1| Protein of unknown function DUF408 [Macleaya cordata]
          Length = 649

 Score =  300 bits (767), Expect = 7e-91
 Identities = 177/458 (38%), Positives = 243/458 (53%), Gaps = 39/458 (8%)
 Frame = +1

Query: 232  MALIDMDYEGSKFKDSKLKKEENKIFNEMDFMSTIIMHD--------------------- 348
            +A +    EGSK K+++ KK + K+ NEMDF STIIM D                     
Sbjct: 187  LASLKHQEEGSKPKNARPKKGKGKVVNEMDFTSTIIMGDQFSIPKTSFAHKQSFVTKSKG 246

Query: 349  DGYSVSKQPSEPASKSPGTTSENSRKKMNRKKTNDKSVLSADSAGNALNVPETKLKKINN 528
            D +++ +  S P      T  E S+ +++      +  +   S+G + N  +  +K+ N 
Sbjct: 247  DQFNILEVSSAPVQNGSETILEESKGEVSNSVVEGRFKIPEMSSGASENGSDRSVKESNE 306

Query: 529  E---GSDTFANHEASGVDADVTEREKAPVCDHQPXXXXXXXXXXXXXXXXXXXXXXWADE 699
            E   G  T     A       ++ +K                              WADE
Sbjct: 307  EVCVGKTTQLTETALKSSLKSSDAKKLT------------------------RNVTWADE 342

Query: 700  KKDDNAKXXXXXXXXXXXXX----------VDDDDHAFRLXXXXXXXXXXXXXXXXXXSG 849
            + D  +                        V DD+ + R                    G
Sbjct: 343  ENDTASHGNLCDVQEMGDTRGSAESSCSSNVVDDESSLRFASAVACAIALKQAAECAACG 402

Query: 850  EFDAPDAVTEAGLVILPPPH-----DDNKVVSEGTVDPEPAPVKWPQKTGIVEADFLDSE 1014
            E D  DAV+EAG+VILP  H     D  K   E  ++ EP P+KWP K GI +++  DSE
Sbjct: 403  ESDVIDAVSEAGIVILPQQHHADGGDSQKY--ENVLELEPVPLKWPLKPGISDSELFDSE 460

Query: 1015 DSWFDSPPEEFVVDLSPFGTMFMSLFAWVSSSTLAYVYGRDDSFHEDYASVNGREYPRKI 1194
            DSW+D+PPE F + LSPF TM+M+LF W++SS+LAY+YGR++S  E++  VNGREYP KI
Sbjct: 461  DSWYDTPPEGFSLTLSPFATMWMALFGWITSSSLAYIYGREESSQEEFLLVNGREYPCKI 520

Query: 1195 VLTDGRSSEIKQTLAGCLSRALPGLLRDLRVPTPVSTIEFGLGSLIETMSFLDALPGLRM 1374
            VL+DGRSSEIKQTLAGCL+RALPG+++DLR+PTP+ST+E G+G L++TMSF DALP  RM
Sbjct: 521  VLSDGRSSEIKQTLAGCLARALPGVVKDLRLPTPISTLEQGMGRLLDTMSFTDALPSFRM 580

Query: 1375 KQWKVFVLLFIEGLSVCRIPAIAPHLTNKRSFFQKVFD 1488
            KQW V VLLF++ LSVCRIP + PH+T+ R    KV D
Sbjct: 581  KQWHVIVLLFVDALSVCRIPGLTPHMTSTRMLLHKVLD 618


>ref|XP_016666333.1| PREDICTED: putative RNA polymerase II subunit B1 CTD phosphatase
            RPAP2 homolog [Gossypium hirsutum]
 ref|XP_016666334.1| PREDICTED: putative RNA polymerase II subunit B1 CTD phosphatase
            RPAP2 homolog [Gossypium hirsutum]
 ref|XP_016666335.1| PREDICTED: putative RNA polymerase II subunit B1 CTD phosphatase
            RPAP2 homolog [Gossypium hirsutum]
          Length = 695

 Score =  298 bits (763), Expect = 8e-90
 Identities = 182/448 (40%), Positives = 240/448 (53%), Gaps = 31/448 (6%)
 Frame = +1

Query: 238  LIDMDYEGSKFKDSKLKKEENK------IFNEMDFMSTIIMHDDGYSVSKQPSEPASKSP 399
            +++ +Y  SK   S  + +  K      + NEMDF S IIM+D+ Y+VSK P      S 
Sbjct: 229  IMNNEYTTSKNPGSLRQSQRTKPSSMKDVINEMDFTSEIIMNDE-YTVSKTPPGSRQGSS 287

Query: 400  GTTSENSRKKMNRKKTNDKSVLSADSAG------NALNVPETKLKKINNEGSDTFANHEA 561
            G+  + +  K   K   +K + S  S+         + +P TK   ++  G DT  N EA
Sbjct: 288  GSKLKKTEGKGVCKDFEEKCMRSESSSALTKEDSGIVQMPSTKC--VDQSGLDTI-NAEA 344

Query: 562  SGVDADVTEREKAPVCDHQPXXXXXXXXXXXXXXXXXXXXXXWADEKKDDNAKXXXXXXX 741
                   T  +KA                             WAD+K  D+A+       
Sbjct: 345  E----KETHSDKAMASS----GVVLKSSLKPAGAKKLNRSVTWADKKNVDSARKGSLCEV 396

Query: 742  XXXXXXVDD------------DDHAFRLXXXXXXXXXXXXXXXXXXSGEFDAPDAVTEAG 885
                    D            DD   R                   SG+ D  DAV+EAG
Sbjct: 397  KEMDAQKGDSENIGRAEDGDADDKMLRFASAEACAMALSKAAAAVASGDSDVNDAVSEAG 456

Query: 886  LVILPPPHDDNKVVSEGTVD-------PEPAPVKWPQKTGIVEADFLDSEDSWFDSPPEE 1044
            L+ILP P + +K      +D       PE  PVKWP K GI  +DF D EDSWFD+PPE 
Sbjct: 457  LIILPHPLEADKEEKVENIDTLEADPEPEEGPVKWPTKPGIPRSDFFDPEDSWFDAPPEG 516

Query: 1045 FVVDLSPFGTMFMSLFAWVSSSTLAYVYGRDDSFHEDYASVNGREYPRKIVLTDGRSSEI 1224
            F + LS F TM+ +LF W++SS+LAY+YGRD++FHE+Y SVNGREYP+KIVL DGRSSEI
Sbjct: 517  FSLTLSTFATMWNALFEWITSSSLAYIYGRDETFHEEYLSVNGREYPQKIVLRDGRSSEI 576

Query: 1225 KQTLAGCLSRALPGLLRDLRVPTPVSTIEFGLGSLIETMSFLDALPGLRMKQWKVFVLLF 1404
            K+TLAGC+SRALP +   LR+P P+ST+E G+G L++TMSF++ALP  RMKQW+V VLL 
Sbjct: 577  KETLAGCISRALPAIATALRLPIPISTLEQGMGRLLDTMSFVEALPAFRMKQWQVIVLLL 636

Query: 1405 IEGLSVCRIPAIAPHLTNKRSFFQKVFD 1488
            I+ LSVCRIPA+ PH+TN R    KV D
Sbjct: 637  IDALSVCRIPALTPHMTNGRMLLHKVLD 664


>ref|XP_012479689.1| PREDICTED: putative RNA polymerase II subunit B1 CTD phosphatase
            RPAP2 homolog isoform X2 [Gossypium raimondii]
          Length = 695

 Score =  296 bits (759), Expect = 3e-89
 Identities = 182/449 (40%), Positives = 241/449 (53%), Gaps = 32/449 (7%)
 Frame = +1

Query: 238  LIDMDYEGSKFKDSKLKKEENK------IFNEMDFMSTIIMHDDGYSVSKQP-----SEP 384
            +++ +Y  SK   S  + +  K      + NEMDF S IIM+D+ Y+VSK P        
Sbjct: 229  IMNNEYTTSKNPGSLRQSQRTKPSSMKDVINEMDFTSEIIMNDE-YTVSKTPPGSRQGSS 287

Query: 385  ASKSPGTTSENSRKKMNRK--KTNDKSVLSADSAGNALNVPETKLKKINNEGSDTFANHE 558
             SK   T  +   K    K  ++   S L+ + +G  + +P TK   ++  G DT  N E
Sbjct: 288  GSKLKKTEGQGVCKDFEEKCMRSESSSALTKEDSG-IVEMPSTKC--VDQSGLDTI-NAE 343

Query: 559  ASGVDADVTEREKAPVCDHQPXXXXXXXXXXXXXXXXXXXXXXWADEKKDDNAKXXXXXX 738
            A       T  +KA                             WAD+K  D A+      
Sbjct: 344  AE----KETHSDKAVASS----GVVLKSSLKSAGAKKLNRSVTWADKKNVDGARKGSLCE 395

Query: 739  XXXXXXXV------------DDDDHAFRLXXXXXXXXXXXXXXXXXXSGEFDAPDAVTEA 882
                                DDDD+  R                   SG+ D  DAV+EA
Sbjct: 396  VKEMDAQKGDSENLGRAEDGDDDDNMLRFASAEACAMALSEAAAAVASGDSDVNDAVSEA 455

Query: 883  GLVILPPPHDDNKVVSEGTVD-------PEPAPVKWPQKTGIVEADFLDSEDSWFDSPPE 1041
            GL+IL  P + +K      +D       PE  PVKWP K GI  +DF D EDSWFD+PPE
Sbjct: 456  GLIILAHPLEADKEEKVENIDTLEAEPEPEEGPVKWPTKPGIPRSDFFDPEDSWFDAPPE 515

Query: 1042 EFVVDLSPFGTMFMSLFAWVSSSTLAYVYGRDDSFHEDYASVNGREYPRKIVLTDGRSSE 1221
             F + LS F TM+ +LF W++SS+LAY+YGRD++FHE+Y SVNGREYP+KIVL DGRSSE
Sbjct: 516  GFSLTLSTFATMWNALFEWITSSSLAYIYGRDETFHEEYLSVNGREYPQKIVLRDGRSSE 575

Query: 1222 IKQTLAGCLSRALPGLLRDLRVPTPVSTIEFGLGSLIETMSFLDALPGLRMKQWKVFVLL 1401
            IK+TLAGC+SRA P ++  LR+P P+ST+E G+G L++TMSF++ALP  RMKQW+V VLL
Sbjct: 576  IKETLAGCISRAFPAIVTALRLPIPISTLEQGMGRLLDTMSFVEALPAFRMKQWQVIVLL 635

Query: 1402 FIEGLSVCRIPAIAPHLTNKRSFFQKVFD 1488
             I+ LSVCRIPA+ PH+TN R    KV D
Sbjct: 636  LIDALSVCRIPALTPHMTNGRMLLHKVLD 664


>ref|XP_017611362.1| PREDICTED: putative RNA polymerase II subunit B1 CTD phosphatase
            RPAP2 homolog [Gossypium arboreum]
 ref|XP_017611363.1| PREDICTED: putative RNA polymerase II subunit B1 CTD phosphatase
            RPAP2 homolog [Gossypium arboreum]
 ref|XP_017611364.1| PREDICTED: putative RNA polymerase II subunit B1 CTD phosphatase
            RPAP2 homolog [Gossypium arboreum]
          Length = 697

 Score =  296 bits (759), Expect = 3e-89
 Identities = 183/450 (40%), Positives = 240/450 (53%), Gaps = 33/450 (7%)
 Frame = +1

Query: 238  LIDMDYEGSKFKDSKLKKEENK------IFNEMDFMSTIIMHDDGYSVSKQPSEPASKSP 399
            +++ +Y  SK   S  + +  K      + NEMDF S IIM+D+ Y+VSK P      S 
Sbjct: 229  IMNNEYTTSKNPGSLRQSQRTKPSSMKDVINEMDFTSEIIMNDE-YTVSKTPPGSRQGSS 287

Query: 400  GTTSENSRKKMNRKKTNDKSVLSADSAG------NALNVPETKLKKINNEGSDTFANHEA 561
            G+  E +  K   K   +K + S  S+         + +P TK   ++  G DT  N EA
Sbjct: 288  GSKLEKTEGKGVCKDFEEKCMRSESSSALTKEDSGIVQMPSTKC--VDQSGLDTI-NAEA 344

Query: 562  SGVDADVTEREKAPVCDHQPXXXXXXXXXXXXXXXXXXXXXXWADEKKDDNA-------- 717
                   T  +KA                             WAD+K  D+A        
Sbjct: 345  E----KETHSDKAMASS----GVVLKSSLKPAGAKKLNRSVTWADKKNVDSARKGSLCEV 396

Query: 718  ------KXXXXXXXXXXXXXVDDDDHAFRLXXXXXXXXXXXXXXXXXXSGEFDAPDAVTE 879
                  K              DD    F                    SG+ D  DAV+E
Sbjct: 397  KEMDAQKGDSENIGRAEDGDADDKMLRFASAEACAMALSKAAAAAAVASGDSDVNDAVSE 456

Query: 880  AGLVILPPPHDDNKVVSEGTVD-------PEPAPVKWPQKTGIVEADFLDSEDSWFDSPP 1038
            AGL+ILP P + +K      +D       PE  PVKWP K GI  +DF D EDSWFD+PP
Sbjct: 457  AGLIILPHPLEADKEEKVENIDTLEADPEPEEGPVKWPTKPGIPRSDFFDPEDSWFDAPP 516

Query: 1039 EEFVVDLSPFGTMFMSLFAWVSSSTLAYVYGRDDSFHEDYASVNGREYPRKIVLTDGRSS 1218
            E F + LS F TM+ +LF W++SS+LAY+YGRD++FHE+Y SVNGREYP+KIVL DGRSS
Sbjct: 517  EGFSLTLSTFATMWNALFEWITSSSLAYIYGRDETFHEEYLSVNGREYPQKIVLRDGRSS 576

Query: 1219 EIKQTLAGCLSRALPGLLRDLRVPTPVSTIEFGLGSLIETMSFLDALPGLRMKQWKVFVL 1398
            EIK+TLAGC+SRALP ++  LR+P P+ST+E G+G L++TMSF++ALP  RMKQW+V VL
Sbjct: 577  EIKETLAGCISRALPAIVTALRLPIPISTLEQGMGRLLDTMSFVEALPAFRMKQWQVLVL 636

Query: 1399 LFIEGLSVCRIPAIAPHLTNKRSFFQKVFD 1488
            L I+ LSVCRIPA+ PH+TN R    KV D
Sbjct: 637  LLIDALSVCRIPALTPHMTNGRMLLHKVLD 666